RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 PCOLCEQ15113 449 aa5.2□□□□□ -1.58
ECHDC1-217ENST00000488087 ABCB5Q2M3G0 1257 aa5.2□□□□□ -1.58
ECHDC1-217ENST00000488087 KRTAP19-4Q3LI73 84 aa5.2□□□□□ -1.58
ECHDC1-217ENST00000488087 LCNL1Q6ZST4 164 aa5.2□□□□□ -1.58
ECHDC1-217ENST00000488087 KBTBD2Q8IY47 623 aa5.2□□□□□ -1.58
ECHDC1-217ENST00000488087 OR14C36Q8NHC7 312 aa5.2□□□□□ -1.58
ECHDC1-217ENST00000488087 STAG1Q8WVM7 1258 aa5.2□□□□□ -1.58
ECHDC1-217ENST00000488087 RAX2Q96IS3 184 aa5.2□□□□□ -1.58
ECHDC1-217ENST00000488087 WDR92Q96MX6 357 aa5.2□□□□□ -1.58
ECHDC1-217ENST00000488087 ASPSCR1Q9BZE9 553 aa5.2□□□□□ -1.58
ECHDC1-217ENST00000488087 KIAA1683Q9H0B3 1180 aa5.2□□□□□ -1.58
ECHDC1-217ENST00000488087 CCM2LQ9NUG4 571 aaPredicted RBP5.2□□□□□ -1.58
ECHDC1-217ENST00000488087 MKS1Q9NXB0 559 aa5.2□□□□□ -1.58
ECHDC1-217ENST00000488087 DPP7Q9UHL4 492 aa5.2□□□□□ -1.58
ECHDC1-217ENST00000488087 SHTN1A0MZ66 631 aa5.19□□□□□ -1.58
ECHDC1-217ENST00000488087 NOBOXO60393 691 aa5.19□□□□□ -1.58
ECHDC1-217ENST00000488087 NRP2O60462 931 aa5.19□□□□□ -1.58
ECHDC1-217ENST00000488087 B4GALT4O60513 344 aa5.19□□□□□ -1.58
ECHDC1-217ENST00000488087 H2AFYO75367 372 aaKnown RBP5.19□□□□□ -1.58
ECHDC1-217ENST00000488087 CFBP00751 764 aa5.19□□□□□ -1.58
ECHDC1-217ENST00000488087 MTHFD2P13995 350 aa5.19□□□□□ -1.58
ECHDC1-217ENST00000488087 CSF2RBP32927 897 aa5.19□□□□□ -1.58
ECHDC1-217ENST00000488087 GPR3P46089 330 aa5.19□□□□□ -1.58
ECHDC1-217ENST00000488087 MRE11P49959 708 aa5.19□□□□□ -1.58
ECHDC1-217ENST00000488087 NRG3P56975 720 aa5.19□□□□□ -1.58
ECHDC1-217ENST00000488087 SRSF2Q01130 221 aaKnown RBP5.19□□□□□ -1.58
ECHDC1-217ENST00000488087 TRIM25Q14258 630 aaKnown RBP5.19□□□□□ -1.58
ECHDC1-217ENST00000488087 PTPN21Q16825 1174 aa5.19□□□□□ -1.58
ECHDC1-217ENST00000488087 ZMAT1Q5H9K5 638 aa5.19□□□□□ -1.58
ECHDC1-217ENST00000488087 TOR2AQ5JU69 321 aa5.19□□□□□ -1.58
ECHDC1-217ENST00000488087 KLHDC10Q6PID8 442 aa5.19□□□□□ -1.58
ECHDC1-217ENST00000488087 LARP4Q71RC2 724 aaKnown RBP eCLIP5.19□□□□□ -1.58
ECHDC1-217ENST00000488087 ZDHHC14Q8IZN3 488 aa5.19□□□□□ -1.58
ECHDC1-217ENST00000488087 LGI4Q8N135 537 aa5.19□□□□□ -1.58
ECHDC1-217ENST00000488087 BCL6BQ8N143 479 aaPredicted RBP5.19□□□□□ -1.58
ECHDC1-217ENST00000488087 MARCH10Q8NA82 808 aaPredicted RBP5.19□□□□□ -1.58
ECHDC1-217ENST00000488087 FEZF2Q8TBJ5 459 aa5.19□□□□□ -1.58
ECHDC1-217ENST00000488087 RSAD2Q8WXG1 361 aa5.19□□□□□ -1.58
ECHDC1-217ENST00000488087 PRDM12Q9H4Q4 367 aa5.19□□□□□ -1.58
ECHDC1-217ENST00000488087 ZCCHC4Q9H5U6 513 aa5.19□□□□□ -1.58
ECHDC1-217ENST00000488087 PRSS50Q9UI38 385 aa5.19□□□□□ -1.58
ECHDC1-217ENST00000488087 TMPRSS11EQ9UL52 423 aa5.19□□□□□ -1.58
ECHDC1-217ENST00000488087 PTPN22Q9Y2R2 807 aa5.19□□□□□ -1.58
ECHDC1-217ENST00000488087 ADAMTS20P59510 1910 aa5.19□□□□□ -1.58
ECHDC1-217ENST00000488087 DAPK3O43293 454 aa5.18□□□□□ -1.58
ECHDC1-217ENST00000488087 XPOTO43592 962 aaKnown RBP5.18□□□□□ -1.58
ECHDC1-217ENST00000488087 CCND1P24385 295 aa5.18□□□□□ -1.58
ECHDC1-217ENST00000488087 GPR15P49685 360 aa5.18□□□□□ -1.58
ECHDC1-217ENST00000488087 SESN2P58004 480 aaPredicted RBP5.18□□□□□ -1.58
ECHDC1-217ENST00000488087 CDK17Q00537 523 aa5.18□□□□□ -1.58
ECHDC1-217ENST00000488087 ADAM15Q13444 863 aa5.18□□□□□ -1.58
ECHDC1-217ENST00000488087 ACAP2Q15057 778 aa5.18□□□□□ -1.58
ECHDC1-217ENST00000488087 MAN2A1Q16706 1144 aa5.18□□□□□ -1.58
ECHDC1-217ENST00000488087 TRIM68Q6AZZ1 485 aa5.18□□□□□ -1.58
ECHDC1-217ENST00000488087 LMBR1LQ6UX01 489 aa5.18□□□□□ -1.58
ECHDC1-217ENST00000488087 PLEKHH3Q7Z736 793 aa5.18□□□□□ -1.58
ECHDC1-217ENST00000488087 PNMA8AQ86V59 439 aaPredicted RBP5.18□□□□□ -1.58
ECHDC1-217ENST00000488087 SIAH1Q8IUQ4 282 aa5.18□□□□□ -1.58
ECHDC1-217ENST00000488087 CBARPQ8N350 705 aaPredicted RBP5.18□□□□□ -1.58
ECHDC1-217ENST00000488087 C1orf162Q8NEQ5 155 aaPredicted RBP5.18□□□□□ -1.58
ECHDC1-217ENST00000488087 AUTS2Q8WXX7 1259 aa5.18□□□□□ -1.58
ECHDC1-217ENST00000488087 GFM2Q969S9 779 aaKnown RBP5.18□□□□□ -1.58
ECHDC1-217ENST00000488087 MBD6Q96DN6 1003 aa5.18□□□□□ -1.58
ECHDC1-217ENST00000488087 VWA7Q9Y334 891 aa5.18□□□□□ -1.58
ECHDC1-217ENST00000488087 MRFAP1Q9Y605 127 aa5.18□□□□□ -1.58
ECHDC1-217ENST00000488087 CDY2AQ9Y6F7 541 aa5.18□□□□□ -1.58
ECHDC1-217ENST00000488087 B4GALT3O60512 393 aa5.17□□□□□ -1.58
ECHDC1-217ENST00000488087 FSBPO95073 299 aa5.17□□□□□ -1.58
ECHDC1-217ENST00000488087 S100BP04271 92 aaPredicted RBP5.17□□□□□ -1.58
ECHDC1-217ENST00000488087 CELA3BP08861 270 aa5.17□□□□□ -1.58
ECHDC1-217ENST00000488087 OSMP13725 252 aa5.17□□□□□ -1.58
ECHDC1-217ENST00000488087 HNRNPLP14866 589 aaKnown RBP eCLIP5.17□□□□□ -1.58
ECHDC1-217ENST00000488087 CCT2P78371 535 aaKnown RBP5.17□□□□□ -1.58
ECHDC1-217ENST00000488087 MRPS9P82933 396 aaKnown RBP5.17□□□□□ -1.58
ECHDC1-217ENST00000488087 MGAT5Q09328 741 aa5.17□□□□□ -1.58
ECHDC1-217ENST00000488087 INAVAQ3KP66 663 aa5.17□□□□□ -1.58
ECHDC1-217ENST00000488087 CCDC178Q5BJE1 867 aa5.17□□□□□ -1.58
ECHDC1-217ENST00000488087 AGBL4Q5VU57 503 aa5.17□□□□□ -1.58
ECHDC1-217ENST00000488087 USP30Q70CQ3 517 aa5.17□□□□□ -1.58
ECHDC1-217ENST00000488087 ZBTB46Q86UZ6 589 aa5.17□□□□□ -1.58
ECHDC1-217ENST00000488087 LYSMD2Q8IV50 215 aa5.17□□□□□ -1.58
ECHDC1-217ENST00000488087 GLB1L2Q8IW92 636 aa5.17□□□□□ -1.58
ECHDC1-217ENST00000488087 GCDHQ92947 438 aaPredicted RBP5.17□□□□□ -1.58
ECHDC1-217ENST00000488087 FUBP3Q96I24 572 aaKnown RBP eCLIP5.17□□□□□ -1.58
ECHDC1-217ENST00000488087 FAXDC2Q96IV6 333 aa5.17□□□□□ -1.58
ECHDC1-217ENST00000488087 KCNC2Q96PR1 638 aa5.17□□□□□ -1.58
ECHDC1-217ENST00000488087 ORAI2Q96SN7 254 aa5.17□□□□□ -1.58
ECHDC1-217ENST00000488087 HAPLN2Q9GZV7 340 aa5.17□□□□□ -1.58
ECHDC1-217ENST00000488087 OR10A2Q9H208 303 aa5.17□□□□□ -1.58
ECHDC1-217ENST00000488087 JADE2Q9NQC1 790 aa5.17□□□□□ -1.58
ECHDC1-217ENST00000488087 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.17□□□□□ -1.58
ECHDC1-217ENST00000488087 EVLQ9UI08 416 aaPredicted RBP5.17□□□□□ -1.58
ECHDC1-217ENST00000488087 ZBTB21Q9ULJ3 1066 aa5.17□□□□□ -1.58
ECHDC1-217ENST00000488087 NR2E1Q9Y466 385 aa5.17□□□□□ -1.58
ECHDC1-217ENST00000488087 GPR45Q9Y5Y3 372 aa5.17□□□□□ -1.58
ECHDC1-217ENST00000488087 TNKSO95271 1327 aa5.17□□□□□ -1.58
ECHDC1-217ENST00000488087 A0A0A6YYK5 440 aaPredicted RBP5.16□□□□□ -1.58
ECHDC1-217ENST00000488087 ALDH1L1O75891 902 aa5.16□□□□□ -1.58
ECHDC1-217ENST00000488087 NEK2P51955 445 aa5.16□□□□□ -1.58
ECHDC1-217ENST00000488087 SLC5A3P53794 718 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms