RNA–Protein interactions for RNA: ENST00000488053.1

TNFSF4-203, Transcript of TNF superfamily member 4, humanhuman

TSL 3

Gene TNFSF4, Length 520 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-203ENST00000488053 SIAH1Q8IUQ4 282 aa7.57□□□□□ -1.2
TNFSF4-203ENST00000488053 RPAP2Q8IXW5 612 aaPredicted RBP7.57□□□□□ -1.2
TNFSF4-203ENST00000488053 SHISA5Q8N114 240 aa7.57□□□□□ -1.2
TNFSF4-203ENST00000488053 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.57□□□□□ -1.2
TNFSF4-203ENST00000488053 LPAR1Q92633 364 aa7.57□□□□□ -1.2
TNFSF4-203ENST00000488053 FERMT2Q96AC1 680 aa7.57□□□□□ -1.2
TNFSF4-203ENST00000488053 FERD3LQ96RJ6 166 aa7.57□□□□□ -1.2
TNFSF4-203ENST00000488053 DPH2Q9BQC3 489 aaPredicted RBP7.57□□□□□ -1.2
TNFSF4-203ENST00000488053 LBHD1Q9BQE6 289 aaPredicted RBP7.57□□□□□ -1.2
TNFSF4-203ENST00000488053 PRDM5Q9NQX1 630 aaPredicted RBP7.57□□□□□ -1.2
TNFSF4-203ENST00000488053 FBXO28Q9NVF7 368 aa7.57□□□□□ -1.2
TNFSF4-203ENST00000488053 HOXC10Q9NYD6 342 aa7.57□□□□□ -1.2
TNFSF4-203ENST00000488053 SWAP70Q9UH65 585 aa7.57□□□□□ -1.2
TNFSF4-203ENST00000488053 KLHL3Q9UH77 587 aa7.57□□□□□ -1.2
TNFSF4-203ENST00000488053 GTF2IRD1Q9UHL9 959 aa7.57□□□□□ -1.2
TNFSF4-203ENST00000488053 EFR3BQ9Y2G0 817 aa7.57□□□□□ -1.2
TNFSF4-203ENST00000488053 LAMA2P24043 3122 aaKnown RBP7.57□□□□□ -1.2
TNFSF4-203ENST00000488053 LTBP2Q14767 1821 aa7.57□□□□□ -1.2
TNFSF4-203ENST00000488053 PRR19A6NJB7 356 aa7.56□□□□□ -1.2
TNFSF4-203ENST00000488053 KBTBD13C9JR72 458 aa7.56□□□□□ -1.2
TNFSF4-203ENST00000488053 DNM1LO00429 736 aa7.56□□□□□ -1.2
TNFSF4-203ENST00000488053 SLITRK5O94991 958 aa7.56□□□□□ -1.2
TNFSF4-203ENST00000488053 PGK2P07205 417 aa7.56□□□□□ -1.2
TNFSF4-203ENST00000488053 EEF2P13639 858 aaKnown RBP7.56□□□□□ -1.2
TNFSF4-203ENST00000488053 LRIT3Q3SXY7 679 aa7.56□□□□□ -1.2
TNFSF4-203ENST00000488053 C12orf60Q5U649 245 aa7.56□□□□□ -1.2
TNFSF4-203ENST00000488053 TMED8Q6PL24 325 aaPredicted RBP7.56□□□□□ -1.2
TNFSF4-203ENST00000488053 CYB5D2Q8WUJ1 264 aa7.56□□□□□ -1.2
TNFSF4-203ENST00000488053 SEC16BQ96JE7 1060 aa7.56□□□□□ -1.2
TNFSF4-203ENST00000488053 HAUS7Q99871 368 aa7.56□□□□□ -1.2
TNFSF4-203ENST00000488053 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.56□□□□□ -1.2
TNFSF4-203ENST00000488053 VCPKMTQ9H867 229 aa7.56□□□□□ -1.2
TNFSF4-203ENST00000488053 CAPN10Q9HC96 672 aa7.56□□□□□ -1.2
TNFSF4-203ENST00000488053 ZBTB40Q9NUA8 1239 aa7.56□□□□□ -1.2
TNFSF4-203ENST00000488053 DDX19BQ9UMR2 479 aa7.56□□□□□ -1.2
TNFSF4-203ENST00000488053 SLC4A4Q9Y6R1 1079 aa7.56□□□□□ -1.2
TNFSF4-203ENST00000488053 MYH4Q9Y623 1939 aa7.56□□□□□ -1.2
TNFSF4-203ENST00000488053 SLC22A31A6NKX4 558 aa7.55□□□□□ -1.2
TNFSF4-203ENST00000488053 WDR46O15213 610 aaKnown RBP7.55□□□□□ -1.2
TNFSF4-203ENST00000488053 CYP26A1O43174 497 aa7.55□□□□□ -1.2
TNFSF4-203ENST00000488053 SEPT4O43236 478 aa7.55□□□□□ -1.2
TNFSF4-203ENST00000488053 STRNO43815 780 aa7.55□□□□□ -1.2
TNFSF4-203ENST00000488053 MSCO60682 206 aa7.55□□□□□ -1.2
TNFSF4-203ENST00000488053 RAB11FIP3O75154 756 aa7.55□□□□□ -1.2
TNFSF4-203ENST00000488053 TGFB1P01137 390 aa7.55□□□□□ -1.2
TNFSF4-203ENST00000488053 FOSL1P15407 271 aa7.55□□□□□ -1.2
TNFSF4-203ENST00000488053 ATP5JP18859 108 aa7.55□□□□□ -1.2
TNFSF4-203ENST00000488053 ETV3P41162 512 aa7.55□□□□□ -1.2
TNFSF4-203ENST00000488053 ADCYAP1R1P41586 468 aa7.55□□□□□ -1.2
TNFSF4-203ENST00000488053 TMEM132BQ14DG7 1078 aa7.55□□□□□ -1.2
TNFSF4-203ENST00000488053 TRIM60Q495X7 471 aa7.55□□□□□ -1.2
TNFSF4-203ENST00000488053 FAM47AQ5JRC9 791 aa7.55□□□□□ -1.2
TNFSF4-203ENST00000488053 FAM83BQ5T0W9 1011 aa7.55□□□□□ -1.2
TNFSF4-203ENST00000488053 C20orf194Q5TEA3 1177 aa7.55□□□□□ -1.2
TNFSF4-203ENST00000488053 TSHZ3Q63HK5 1081 aa7.55□□□□□ -1.2
TNFSF4-203ENST00000488053 OLFML2BQ68BL8 750 aa7.55□□□□□ -1.2
TNFSF4-203ENST00000488053 C16orf86Q6ZW13 317 aa7.55□□□□□ -1.2
TNFSF4-203ENST00000488053 AMOTL1Q8IY63 956 aa7.55□□□□□ -1.2
TNFSF4-203ENST00000488053 MB21D1Q8N884 522 aa7.55□□□□□ -1.2
TNFSF4-203ENST00000488053 ARRDC4Q8NCT1 418 aa7.55□□□□□ -1.2
TNFSF4-203ENST00000488053 SHCBP1Q8NEM2 672 aa7.55□□□□□ -1.2
TNFSF4-203ENST00000488053 TMEM40Q8WWA1 233 aa7.55□□□□□ -1.2
TNFSF4-203ENST00000488053 MAML3Q96JK9 1138 aa7.55□□□□□ -1.2
TNFSF4-203ENST00000488053 MMP19Q99542 508 aa7.55□□□□□ -1.2
TNFSF4-203ENST00000488053 NUP88Q99567 741 aaPredicted RBP7.55□□□□□ -1.2
TNFSF4-203ENST00000488053 PUS7LQ9H0K6 701 aaKnown RBP7.55□□□□□ -1.2
TNFSF4-203ENST00000488053 SH2D4AQ9H788 454 aa7.55□□□□□ -1.2
TNFSF4-203ENST00000488053 ATP8A2Q9NTI2 1148 aa7.55□□□□□ -1.2
TNFSF4-203ENST00000488053 MTMR10Q9NXD2 777 aa7.55□□□□□ -1.2
TNFSF4-203ENST00000488053 TMX2Q9Y320 296 aa7.55□□□□□ -1.2
TNFSF4-203ENST00000488053 MCM3APO60318 1980 aa7.55□□□□□ -1.2
TNFSF4-203ENST00000488053 MEIS3P2A8K0S8 358 aa7.54□□□□□ -1.2
TNFSF4-203ENST00000488053 UPK3BL1B0FP48 263 aa7.54□□□□□ -1.2
TNFSF4-203ENST00000488053 CHURC1-FNTBB4DL54 471 aa7.54□□□□□ -1.2
TNFSF4-203ENST00000488053 UPK3BL2E5RIL1 263 aa7.54□□□□□ -1.2
TNFSF4-203ENST00000488053 DNAJA2O60884 412 aa7.54□□□□□ -1.2
TNFSF4-203ENST00000488053 EOMESO95936 686 aa7.54□□□□□ -1.2
TNFSF4-203ENST00000488053 FCER1AP12319 257 aa7.54□□□□□ -1.2
TNFSF4-203ENST00000488053 TAL1P17542 331 aaPredicted RBP7.54□□□□□ -1.2
TNFSF4-203ENST00000488053 LRRC41Q15345 812 aa7.54□□□□□ -1.2
TNFSF4-203ENST00000488053 OVOS1Q6IE37 1185 aa7.54□□□□□ -1.2
TNFSF4-203ENST00000488053 CTR9Q6PD62 1173 aa7.54□□□□□ -1.2
TNFSF4-203ENST00000488053 SLC39A5Q6ZMH5 540 aa7.54□□□□□ -1.2
TNFSF4-203ENST00000488053 COX4I2Q96KJ9 171 aa7.54□□□□□ -1.2
TNFSF4-203ENST00000488053 CCDC17Q96LX7 622 aa7.54□□□□□ -1.2
TNFSF4-203ENST00000488053 GUCD1Q96NT3 240 aa7.54□□□□□ -1.2
TNFSF4-203ENST00000488053 LRRCC1Q9C099 1032 aa7.54□□□□□ -1.2
TNFSF4-203ENST00000488053 MROH8Q9H579 483 aa7.54□□□□□ -1.2
TNFSF4-203ENST00000488053 LRRC4CQ9HCJ2 640 aa7.54□□□□□ -1.2
TNFSF4-203ENST00000488053 SLC5A4Q9NY91 659 aa7.54□□□□□ -1.2
TNFSF4-203ENST00000488053 TPX2Q9ULW0 747 aaKnown RBP7.54□□□□□ -1.2
TNFSF4-203ENST00000488053 PPT2Q9UMR5 302 aa7.54□□□□□ -1.2
TNFSF4-203ENST00000488053 MAPK8IP1Q9UQF2 711 aa7.54□□□□□ -1.2
TNFSF4-203ENST00000488053 STXBP5LQ9Y2K9 1186 aa7.54□□□□□ -1.2
TNFSF4-203ENST00000488053 EYSQ5T1H1 3165 aa7.54□□□□□ -1.2
TNFSF4-203ENST00000488053 GREB1LQ9C091 1923 aaPredicted RBP7.54□□□□□ -1.2
TNFSF4-203ENST00000488053 A0A0C4DFX4 3053 aa7.53□□□□□ -1.2
TNFSF4-203ENST00000488053 UNC80Q8N2C7 3258 aa7.53□□□□□ -1.2
TNFSF4-203ENST00000488053 VWA5AO00534 786 aa7.53□□□□□ -1.2
TNFSF4-203ENST00000488053 PGK1P00558 417 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms