RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 TM4SF4P48230 202 aa10.36□□□□□ -0.75
SF3B1-211ENST00000487698 MAP2K5Q13163 448 aa10.36□□□□□ -0.75
SF3B1-211ENST00000487698 IRF5Q13568 498 aa10.36□□□□□ -0.75
SF3B1-211ENST00000487698 LAMC2Q13753 1193 aa10.36□□□□□ -0.75
SF3B1-211ENST00000487698 SLC35C1Q96A29 364 aa10.36□□□□□ -0.75
SF3B1-211ENST00000487698 KIFC3Q9BVG8 833 aa10.36□□□□□ -0.75
SF3B1-211ENST00000487698 ABHD16BQ9H3Z7 469 aa10.36□□□□□ -0.75
SF3B1-211ENST00000487698 KMT5AQ9NQR1 393 aa10.36□□□□□ -0.75
SF3B1-211ENST00000487698 SLC5A4Q9NY91 659 aa10.36□□□□□ -0.75
SF3B1-211ENST00000487698 ARHGAP28Q9P2N2 729 aa10.36□□□□□ -0.75
SF3B1-211ENST00000487698 TBX20Q9UMR3 447 aa10.36□□□□□ -0.75
SF3B1-211ENST00000487698 EVPLQ92817 2033 aa10.35□□□□□ -0.75
SF3B1-211ENST00000487698 TMEM88BA6NKF7 163 aa10.35□□□□□ -0.75
SF3B1-211ENST00000487698 CCDC169A6NNP5 214 aa10.35□□□□□ -0.75
SF3B1-211ENST00000487698 USP27XA6NNY8 438 aa10.35□□□□□ -0.75
SF3B1-211ENST00000487698 MAFO75444 373 aaPredicted RBP10.35□□□□□ -0.75
SF3B1-211ENST00000487698 KRT9P35527 623 aa10.35□□□□□ -0.75
SF3B1-211ENST00000487698 PSMC2P35998 433 aaKnown RBP10.35□□□□□ -0.75
SF3B1-211ENST00000487698 ARL2P36404 184 aa10.35□□□□□ -0.75
SF3B1-211ENST00000487698 ADCYAP1R1P41586 468 aa10.35□□□□□ -0.75
SF3B1-211ENST00000487698 CRHR2Q13324 411 aa10.35□□□□□ -0.75
SF3B1-211ENST00000487698 PLCB4Q15147 1175 aa10.35□□□□□ -0.75
SF3B1-211ENST00000487698 GJC2Q5T442 439 aaPredicted RBP10.35□□□□□ -0.75
SF3B1-211ENST00000487698 SYCP3Q8IZU3 236 aa10.35□□□□□ -0.75
SF3B1-211ENST00000487698 CCAR2Q8N163 923 aaKnown RBP10.35□□□□□ -0.75
SF3B1-211ENST00000487698 CCDC155Q8N6L0 562 aa10.35□□□□□ -0.75
SF3B1-211ENST00000487698 PPTC7Q8NI37 304 aa10.35□□□□□ -0.75
SF3B1-211ENST00000487698 ASAP3Q8TDY4 903 aa10.35□□□□□ -0.75
SF3B1-211ENST00000487698 SLC7A3Q8WY07 619 aa10.35□□□□□ -0.75
SF3B1-211ENST00000487698 GLG1Q92896 1179 aa10.35□□□□□ -0.75
SF3B1-211ENST00000487698 ZIC5Q96T25 663 aa10.35□□□□□ -0.75
SF3B1-211ENST00000487698 ZFYVE28Q9HCC9 887 aa10.35□□□□□ -0.75
SF3B1-211ENST00000487698 ABT1Q9ULW3 272 aaKnown RBP10.35□□□□□ -0.75
SF3B1-211ENST00000487698 IGKV6-21A0A0C4DH24 114 aa10.34□□□□□ -0.75
SF3B1-211ENST00000487698 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.34□□□□□ -0.75
SF3B1-211ENST00000487698 DENND3A2RUS2 1198 aa10.34□□□□□ -0.75
SF3B1-211ENST00000487698 TISP43B9A030 160 aa10.34□□□□□ -0.75
SF3B1-211ENST00000487698 EPHB6O15197 1021 aa10.34□□□□□ -0.75
SF3B1-211ENST00000487698 IGHA2P01877 340 aa10.34□□□□□ -0.75
SF3B1-211ENST00000487698 XRCC5P13010 732 aaKnown RBP10.34□□□□□ -0.75
SF3B1-211ENST00000487698 HOXD8P13378 290 aaPredicted RBP10.34□□□□□ -0.75
SF3B1-211ENST00000487698 TRIM21P19474 475 aaKnown RBP10.34□□□□□ -0.75
SF3B1-211ENST00000487698 SCP2P22307 547 aa10.34□□□□□ -0.75
SF3B1-211ENST00000487698 GLRA2P23416 452 aa10.34□□□□□ -0.75
SF3B1-211ENST00000487698 KCNMA1Q12791 1236 aa10.34□□□□□ -0.75
SF3B1-211ENST00000487698 KCNH2Q12809 1159 aa10.34□□□□□ -0.75
SF3B1-211ENST00000487698 ACVR2BQ13705 512 aa10.34□□□□□ -0.75
SF3B1-211ENST00000487698 DUSP28Q4G0W2 176 aa10.34□□□□□ -0.75
SF3B1-211ENST00000487698 TAS1R3Q7RTX0 852 aa10.34□□□□□ -0.75
SF3B1-211ENST00000487698 FAM186BQ8IYM0 893 aa10.34□□□□□ -0.75
SF3B1-211ENST00000487698 TMEM143Q96AN5 459 aa10.34□□□□□ -0.75
SF3B1-211ENST00000487698 IFT74Q96LB3 600 aa10.34□□□□□ -0.75
SF3B1-211ENST00000487698 SMARCAD1Q9H4L7 1026 aa10.34□□□□□ -0.75
SF3B1-211ENST00000487698 KCNG1Q9UIX4 513 aa10.34□□□□□ -0.75
SF3B1-211ENST00000487698 EXOC7Q9UPT5 735 aa10.34□□□□□ -0.75
SF3B1-211ENST00000487698 LUC7L2Q9Y383 392 aaKnown RBP10.34□□□□□ -0.75
SF3B1-211ENST00000487698 CASP8AP2Q9UKL3 1982 aa10.34□□□□□ -0.75
SF3B1-211ENST00000487698 H0YCG3 227 aa10.34□□□□□ -0.75
SF3B1-211ENST00000487698 ADCY6O43306 1168 aa10.34□□□□□ -0.75
SF3B1-211ENST00000487698 LGALS2P05162 132 aa10.34□□□□□ -0.75
SF3B1-211ENST00000487698 SMPD1P17405 629 aa10.34□□□□□ -0.75
SF3B1-211ENST00000487698 MARK3P27448 753 aa10.34□□□□□ -0.75
SF3B1-211ENST00000487698 ABCD1P33897 745 aa10.34□□□□□ -0.75
SF3B1-211ENST00000487698 NAMPTP43490 491 aa10.34□□□□□ -0.75
SF3B1-211ENST00000487698 CYP2J2P51589 502 aa10.34□□□□□ -0.75
SF3B1-211ENST00000487698 MCCD1P59942 119 aaPredicted RBP10.34□□□□□ -0.75
SF3B1-211ENST00000487698 ZBED6P86452 979 aa10.34□□□□□ -0.75
SF3B1-211ENST00000487698 AGPAT5Q9NUQ2 364 aa10.34□□□□□ -0.75
SF3B1-211ENST00000487698 FLRT1Q9NZU1 646 aa10.34□□□□□ -0.75
SF3B1-211ENST00000487698 KAT6AQ92794 2004 aa10.34□□□□□ -0.75
SF3B1-211ENST00000487698 SOWAHDA6NJG2 315 aa10.33□□□□□ -0.76
SF3B1-211ENST00000487698 MAPK13O15264 365 aa10.33□□□□□ -0.76
SF3B1-211ENST00000487698 CA12O43570 354 aa10.33□□□□□ -0.76
SF3B1-211ENST00000487698 GAS2O43903 313 aaKnown RBP10.33□□□□□ -0.76
SF3B1-211ENST00000487698 OFD1O75665 1012 aa10.33□□□□□ -0.76
SF3B1-211ENST00000487698 AFPP02771 609 aaKnown RBP10.33□□□□□ -0.76
SF3B1-211ENST00000487698 ADSSP30520 456 aa10.33□□□□□ -0.76
SF3B1-211ENST00000487698 PPP2R5AQ15172 486 aa10.33□□□□□ -0.76
SF3B1-211ENST00000487698 MEA1Q16626 185 aa10.33□□□□□ -0.76
SF3B1-211ENST00000487698 DPY19L2P1Q6NXN4 242 aa10.33□□□□□ -0.76
SF3B1-211ENST00000487698 SLC39A4Q6P5W5 647 aa10.33□□□□□ -0.76
SF3B1-211ENST00000487698 OR8K1Q8NGG5 319 aa10.33□□□□□ -0.76
SF3B1-211ENST00000487698 CBWD1Q9BRT8 395 aa10.33□□□□□ -0.76
SF3B1-211ENST00000487698 EDEM3Q9BZQ6 932 aa10.33□□□□□ -0.76
SF3B1-211ENST00000487698 FAM207AQ9NSI2 230 aaPredicted RBP10.33□□□□□ -0.76
SF3B1-211ENST00000487698 ERAP1Q9NZ08 941 aa10.33□□□□□ -0.76
SF3B1-211ENST00000487698 HSPBP1Q9NZL4 362 aa10.33□□□□□ -0.76
SF3B1-211ENST00000487698 GJD2Q9UKL4 321 aa10.33□□□□□ -0.76
SF3B1-211ENST00000487698 FRMD4BQ9Y2L6 1034 aa10.33□□□□□ -0.76
SF3B1-211ENST00000487698 GTPBP10A4D1E9 387 aaKnown RBP10.33□□□□□ -0.76
SF3B1-211ENST00000487698 ANKRD63C9JTQ0 380 aa10.33□□□□□ -0.76
SF3B1-211ENST00000487698 HBP1O60381 514 aa10.33□□□□□ -0.76
SF3B1-211ENST00000487698 EXOC3O60645 756 aa10.33□□□□□ -0.76
SF3B1-211ENST00000487698 NOL4O94818 638 aa10.33□□□□□ -0.76
SF3B1-211ENST00000487698 TOMM70O94826 608 aa10.33□□□□□ -0.76
SF3B1-211ENST00000487698 MKRN4PQ13434 485 aaPredicted RBP10.33□□□□□ -0.76
SF3B1-211ENST00000487698 CAPSQ13938 189 aa10.33□□□□□ -0.76
SF3B1-211ENST00000487698 MTF1Q14872 753 aa10.33□□□□□ -0.76
SF3B1-211ENST00000487698 OLFML2BQ68BL8 750 aa10.33□□□□□ -0.76
SF3B1-211ENST00000487698 IQSEC1Q6DN90 963 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms