RNA–Protein interactions for RNA: ENST00000487633.1

COL4A3-206, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-206ENST00000487633 ZBTB42B2RXF5 422 aa6.76□□□□□ -1.33
COL4A3-206ENST00000487633 CHURC1-FNTBB4DL54 471 aa6.76□□□□□ -1.33
COL4A3-206ENST00000487633 GPR32O75388 356 aa6.76□□□□□ -1.33
COL4A3-206ENST00000487633 CSDE1O75534 798 aaKnown RBP6.76□□□□□ -1.33
COL4A3-206ENST00000487633 CAPNS1P04632 268 aa6.76□□□□□ -1.33
COL4A3-206ENST00000487633 FNTBP49356 437 aa6.76□□□□□ -1.33
COL4A3-206ENST00000487633 SATB1Q01826 763 aa6.76□□□□□ -1.33
COL4A3-206ENST00000487633 NEDD9Q14511 834 aa6.76□□□□□ -1.33
COL4A3-206ENST00000487633 LAIR1Q6GTX8 287 aa6.76□□□□□ -1.33
COL4A3-206ENST00000487633 KIAA1211LQ6NV74 962 aa6.76□□□□□ -1.33
COL4A3-206ENST00000487633 C15orf39Q6ZRI6 1047 aa6.76□□□□□ -1.33
COL4A3-206ENST00000487633 ECHDC2Q86YB7 292 aa6.76□□□□□ -1.33
COL4A3-206ENST00000487633 ZNF280BQ86YH2 543 aa6.76□□□□□ -1.33
COL4A3-206ENST00000487633 LRRC43Q8N309 656 aa6.76□□□□□ -1.33
COL4A3-206ENST00000487633 FAM160A2Q8N612 972 aaPredicted RBP6.76□□□□□ -1.33
COL4A3-206ENST00000487633 SECISBP2LQ93073 1101 aaKnown RBP6.76□□□□□ -1.33
COL4A3-206ENST00000487633 MTMR8Q96EF0 704 aa6.76□□□□□ -1.33
COL4A3-206ENST00000487633 IGSF21Q96ID5 467 aa6.76□□□□□ -1.33
COL4A3-206ENST00000487633 KXD1Q9BQD3 176 aa6.76□□□□□ -1.33
COL4A3-206ENST00000487633 MYL10Q9BUA6 226 aa6.76□□□□□ -1.33
COL4A3-206ENST00000487633 SCNM1Q9BWG6 230 aa6.76□□□□□ -1.33
COL4A3-206ENST00000487633 LSM14BQ9BX40 385 aaKnown RBP6.76□□□□□ -1.33
COL4A3-206ENST00000487633 ELAC1Q9H777 363 aaKnown RBP6.76□□□□□ -1.33
COL4A3-206ENST00000487633 C1orf112Q9NSG2 853 aa6.76□□□□□ -1.33
COL4A3-206ENST00000487633 ASCC3Q8N3C0 2202 aaKnown RBP6.75□□□□□ -1.33
COL4A3-206ENST00000487633 ASXL3Q9C0F0 2248 aa6.75□□□□□ -1.33
COL4A3-206ENST00000487633 SMIM35A0A1B0GVV1 85 aa6.75□□□□□ -1.33
COL4A3-206ENST00000487633 C2CD2LO14523 706 aa6.75□□□□□ -1.33
COL4A3-206ENST00000487633 AXIN1O15169 862 aa6.75□□□□□ -1.33
COL4A3-206ENST00000487633 FIBPO43427 364 aa6.75□□□□□ -1.33
COL4A3-206ENST00000487633 CYTH3O43739 400 aa6.75□□□□□ -1.33
COL4A3-206ENST00000487633 ZC3H11AO75152 810 aaKnown RBP eCLIP6.75□□□□□ -1.33
COL4A3-206ENST00000487633 DDHD2O94830 711 aa6.75□□□□□ -1.33
COL4A3-206ENST00000487633 FGAP02671 866 aa6.75□□□□□ -1.33
COL4A3-206ENST00000487633 VTNP04004 478 aa6.75□□□□□ -1.33
COL4A3-206ENST00000487633 GALTP07902 379 aa6.75□□□□□ -1.33
COL4A3-206ENST00000487633 SLC3A2P08195 630 aaKnown RBP6.75□□□□□ -1.33
COL4A3-206ENST00000487633 ITGB5P18084 799 aa6.75□□□□□ -1.33
COL4A3-206ENST00000487633 ATP4AP20648 1035 aa6.75□□□□□ -1.33
COL4A3-206ENST00000487633 KLRC1P26715 233 aa6.75□□□□□ -1.33
COL4A3-206ENST00000487633 KLRC2P26717 231 aa6.75□□□□□ -1.33
COL4A3-206ENST00000487633 PPM1AP35813 382 aa6.75□□□□□ -1.33
COL4A3-206ENST00000487633 SLC11A1P49279 550 aa6.75□□□□□ -1.33
COL4A3-206ENST00000487633 RBM25P49756 843 aaKnown RBP6.75□□□□□ -1.33
COL4A3-206ENST00000487633 SIM2Q14190 667 aaPredicted RBP6.75□□□□□ -1.33
COL4A3-206ENST00000487633 GPATCH4Q5T3I0 446 aaKnown RBP6.75□□□□□ -1.33
COL4A3-206ENST00000487633 STPG1Q5TH74 334 aa6.75□□□□□ -1.33
COL4A3-206ENST00000487633 IL31Q6EBC2 164 aa6.75□□□□□ -1.33
COL4A3-206ENST00000487633 USP17L6PQ6QN14 398 aa6.75□□□□□ -1.33
COL4A3-206ENST00000487633 TPRG1Q6ZUI0 275 aa6.75□□□□□ -1.33
COL4A3-206ENST00000487633 DDX53Q86TM3 631 aaKnown RBP6.75□□□□□ -1.33
COL4A3-206ENST00000487633 PNMA1Q8ND90 353 aa6.75□□□□□ -1.33
COL4A3-206ENST00000487633 SMG7Q92540 1137 aaKnown RBP6.75□□□□□ -1.33
COL4A3-206ENST00000487633 CRELD1Q96HD1 420 aa6.75□□□□□ -1.33
COL4A3-206ENST00000487633 TMEM169Q96HH4 297 aa6.75□□□□□ -1.33
COL4A3-206ENST00000487633 B3GALT6Q96L58 329 aa6.75□□□□□ -1.33
COL4A3-206ENST00000487633 PIGSQ96S52 555 aa6.75□□□□□ -1.33
COL4A3-206ENST00000487633 NACAP1Q9BZK3 213 aa6.75□□□□□ -1.33
COL4A3-206ENST00000487633 ARRDC1-AS1Q9H2J1 176 aa6.75□□□□□ -1.33
COL4A3-206ENST00000487633 HEBP1Q9NRV9 189 aa6.75□□□□□ -1.33
COL4A3-206ENST00000487633 ECHDC1Q9NTX5 307 aa6.75□□□□□ -1.33
COL4A3-206ENST00000487633 FAM217BQ9NTX9 383 aaPredicted RBP6.75□□□□□ -1.33
COL4A3-206ENST00000487633 ERAP1Q9NZ08 941 aa6.75□□□□□ -1.33
COL4A3-206ENST00000487633 NUP205Q92621 2012 aa6.75□□□□□ -1.33
COL4A3-206ENST00000487633 MYH9P35579 1960 aaKnown RBP6.75□□□□□ -1.33
COL4A3-206ENST00000487633 SPDYE4A6NLX3 237 aa6.74□□□□□ -1.33
COL4A3-206ENST00000487633 B4E1Z4 1266 aa6.74□□□□□ -1.33
COL4A3-206ENST00000487633 TEX28O15482 410 aa6.74□□□□□ -1.33
COL4A3-206ENST00000487633 DHX16O60231 1041 aaKnown RBP6.74□□□□□ -1.33
COL4A3-206ENST00000487633 C1QL1O75973 258 aa6.74□□□□□ -1.33
COL4A3-206ENST00000487633 LIMK1P53667 647 aa6.74□□□□□ -1.33
COL4A3-206ENST00000487633 ADCY1Q08828 1119 aa6.74□□□□□ -1.33
COL4A3-206ENST00000487633 ZNF252P-AS1Q0IIN9 211 aa6.74□□□□□ -1.33
COL4A3-206ENST00000487633 COL28A1Q2UY09 1125 aa6.74□□□□□ -1.33
COL4A3-206ENST00000487633 AASDHQ4L235 1098 aaPredicted RBP6.74□□□□□ -1.33
COL4A3-206ENST00000487633 HSP90AB4PQ58FF6 505 aa6.74□□□□□ -1.33
COL4A3-206ENST00000487633 PPP4R3BQ5MIZ7 849 aa6.74□□□□□ -1.33
COL4A3-206ENST00000487633 LARP1BQ659C4 914 aaKnown RBP6.74□□□□□ -1.33
COL4A3-206ENST00000487633 HEATR6Q6AI08 1181 aaKnown RBP6.74□□□□□ -1.33
COL4A3-206ENST00000487633 ZNF589Q86UQ0 364 aaPredicted RBP6.74□□□□□ -1.33
COL4A3-206ENST00000487633 PDZD3Q86UT5 571 aa6.74□□□□□ -1.33
COL4A3-206ENST00000487633 HOMER1Q86YM7 354 aa6.74□□□□□ -1.33
COL4A3-206ENST00000487633 GLYCTKQ8IVS8 523 aa6.74□□□□□ -1.33
COL4A3-206ENST00000487633 CMASQ8NFW8 434 aaPredicted RBP6.74□□□□□ -1.33
COL4A3-206ENST00000487633 ITFG1Q8TB96 612 aa6.74□□□□□ -1.33
COL4A3-206ENST00000487633 SEPT1Q8WYJ6 367 aa6.74□□□□□ -1.33
COL4A3-206ENST00000487633 AMNQ9BXJ7 453 aa6.74□□□□□ -1.33
COL4A3-206ENST00000487633 NT5C3AQ9H0P0 336 aa6.74□□□□□ -1.33
COL4A3-206ENST00000487633 SENP2Q9HC62 589 aa6.74□□□□□ -1.33
COL4A3-206ENST00000487633 TBC1D13Q9NVG8 400 aa6.74□□□□□ -1.33
COL4A3-206ENST00000487633 KLK13Q9UKR3 277 aa6.74□□□□□ -1.33
COL4A3-206ENST00000487633 PNMA2Q9UL42 364 aa6.74□□□□□ -1.33
COL4A3-206ENST00000487633 NDRG2Q9UN36 371 aaKnown RBP6.74□□□□□ -1.33
COL4A3-206ENST00000487633 GPSM3Q9Y4H4 160 aa6.74□□□□□ -1.33
COL4A3-206ENST00000487633 PCNX2A6NKB5 2137 aa6.74□□□□□ -1.33
COL4A3-206ENST00000487633 ADAMTS9Q9P2N4 1935 aa6.74□□□□□ -1.33
COL4A3-206ENST00000487633 CACNA1EQ15878 2313 aa6.73□□□□□ -1.33
COL4A3-206ENST00000487633 GCOM1H8Y6P7 765 aaPredicted RBP6.73□□□□□ -1.33
COL4A3-206ENST00000487633 K7ESF4 209 aa6.73□□□□□ -1.33
COL4A3-206ENST00000487633 M0QZ92 97 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms