RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 TTC19Q6DKK2 380 aaPredicted RBP12.73□□□□□ -0.37
TRA2B-214ENST00000487615 TRAPPC11Q7Z392 1133 aa12.73□□□□□ -0.37
TRA2B-214ENST00000487615 BBOF1Q8ND07 529 aa12.73□□□□□ -0.37
TRA2B-214ENST00000487615 CALR3Q96L12 384 aaKnown RBP12.73□□□□□ -0.37
TRA2B-214ENST00000487615 MYOZ2Q9NPC6 264 aa12.73□□□□□ -0.37
TRA2B-214ENST00000487615 ZNF148Q9UQR1 794 aa12.73□□□□□ -0.37
TRA2B-214ENST00000487615 KLRC1P26715 233 aa12.73□□□□□ -0.37
TRA2B-214ENST00000487615 HERVK_113P62684 666 aa12.73□□□□□ -0.37
TRA2B-214ENST00000487615 FKBP1AP62942 108 aaKnown RBP12.73□□□□□ -0.37
TRA2B-214ENST00000487615 ZNF746Q6NUN9 644 aaPredicted RBP12.73□□□□□ -0.37
TRA2B-214ENST00000487615 RUBCNQ92622 972 aa12.73□□□□□ -0.37
TRA2B-214ENST00000487615 MRRFQ96E11 262 aaKnown RBP12.73□□□□□ -0.37
TRA2B-214ENST00000487615 DDX47Q9H0S4 455 aaKnown RBP12.73□□□□□ -0.37
TRA2B-214ENST00000487615 KCNQ5Q9NR82 932 aa12.73□□□□□ -0.37
TRA2B-214ENST00000487615 CNOT8Q9UFF9 292 aaKnown RBP12.73□□□□□ -0.37
TRA2B-214ENST00000487615 CCT5P48643 541 aa12.72□□□□□ -0.37
TRA2B-214ENST00000487615 UAP1Q16222 522 aaPredicted RBP12.72□□□□□ -0.37
TRA2B-214ENST00000487615 C4orf32Q8N8J7 132 aa12.72□□□□□ -0.37
TRA2B-214ENST00000487615 HNRNPLLQ8WVV9 542 aaKnown RBP12.72□□□□□ -0.37
TRA2B-214ENST00000487615 PPM1EQ8WY54 764 aa12.72□□□□□ -0.37
TRA2B-214ENST00000487615 ANKRD36BP1Q96IX9 119 aa12.72□□□□□ -0.37
TRA2B-214ENST00000487615 CNOT7Q9UIV1 285 aaKnown RBP12.72□□□□□ -0.37
TRA2B-214ENST00000487615 PKD1L3Q7Z443 1732 aa12.72□□□□□ -0.37
TRA2B-214ENST00000487615 PLSCR1O15162 318 aa12.72□□□□□ -0.37
TRA2B-214ENST00000487615 ICAM1P05362 532 aa12.72□□□□□ -0.37
TRA2B-214ENST00000487615 PLS3P13797 630 aa12.72□□□□□ -0.37
TRA2B-214ENST00000487615 COG2Q14746 738 aa12.72□□□□□ -0.37
TRA2B-214ENST00000487615 TEX2Q8IWB9 1127 aa12.72□□□□□ -0.37
TRA2B-214ENST00000487615 MRIQ9BWK5 157 aa12.72□□□□□ -0.37
TRA2B-214ENST00000487615 HSPBP1Q9NZL4 362 aa12.72□□□□□ -0.37
TRA2B-214ENST00000487615 ARHGAP20Q9P2F6 1191 aa12.72□□□□□ -0.37
TRA2B-214ENST00000487615 DUSP10Q9Y6W6 482 aa12.72□□□□□ -0.37
TRA2B-214ENST00000487615 KRT15P19012 456 aa12.72□□□□□ -0.37
TRA2B-214ENST00000487615 KAZNQ674X7 775 aa12.72□□□□□ -0.37
TRA2B-214ENST00000487615 KCNK18Q7Z418 384 aa12.72□□□□□ -0.37
TRA2B-214ENST00000487615 FBXL13Q8NEE6 735 aa12.72□□□□□ -0.37
TRA2B-214ENST00000487615 MKL1Q969V6 931 aa12.72□□□□□ -0.37
TRA2B-214ENST00000487615 TEX13BQ9BXU2 312 aa12.72□□□□□ -0.37
TRA2B-214ENST00000487615 SCAF8Q9UPN6 1271 aaKnown RBP12.72□□□□□ -0.37
TRA2B-214ENST00000487615 NOC2LQ9Y3T9 749 aaKnown RBP12.72□□□□□ -0.37
TRA2B-214ENST00000487615 PFASO15067 1338 aa12.72□□□□□ -0.37
TRA2B-214ENST00000487615 LRP6O75581 1613 aa12.72□□□□□ -0.37
TRA2B-214ENST00000487615 RNF8O76064 485 aa12.72□□□□□ -0.37
TRA2B-214ENST00000487615 NR3C2P08235 984 aa12.72□□□□□ -0.37
TRA2B-214ENST00000487615 GALCP54803 685 aa12.72□□□□□ -0.37
TRA2B-214ENST00000487615 CCNA1P78396 465 aa12.72□□□□□ -0.37
TRA2B-214ENST00000487615 EZH2Q15910 746 aaKnown RBP12.72□□□□□ -0.37
TRA2B-214ENST00000487615 ZBTB33Q86T24 672 aa12.72□□□□□ -0.37
TRA2B-214ENST00000487615 TRIM59Q8IWR1 403 aa12.72□□□□□ -0.37
TRA2B-214ENST00000487615 JPH1Q9HDC5 661 aaPredicted RBP12.72□□□□□ -0.37
TRA2B-214ENST00000487615 SLC9A2Q9UBY0 812 aa12.72□□□□□ -0.37
TRA2B-214ENST00000487615 A0A087X0T9 212 aa12.71□□□□□ -0.37
TRA2B-214ENST00000487615 FAM228BP0C875 321 aa12.71□□□□□ -0.37
TRA2B-214ENST00000487615 SRGAP2CP0DJJ0 459 aa12.71□□□□□ -0.37
TRA2B-214ENST00000487615 NR1D1P20393 614 aa12.71□□□□□ -0.37
TRA2B-214ENST00000487615 MUTP22033 750 aa12.71□□□□□ -0.37
TRA2B-214ENST00000487615 OSBPP22059 807 aa12.71□□□□□ -0.37
TRA2B-214ENST00000487615 LMNB2Q03252 620 aa12.71□□□□□ -0.37
TRA2B-214ENST00000487615 SURF1Q15526 300 aa12.71□□□□□ -0.37
TRA2B-214ENST00000487615 MS4A14Q96JA4 679 aa12.71□□□□□ -0.37
TRA2B-214ENST00000487615 MTRQ99707 1265 aa12.71□□□□□ -0.37
TRA2B-214ENST00000487615 VIPAS39Q9H9C1 493 aa12.71□□□□□ -0.37
TRA2B-214ENST00000487615 VPS37BQ9H9H4 285 aa12.71□□□□□ -0.37
TRA2B-214ENST00000487615 ZNF302Q9NR11 478 aa12.71□□□□□ -0.37
TRA2B-214ENST00000487615 ANAPC7Q9UJX3 599 aa12.71□□□□□ -0.37
TRA2B-214ENST00000487615 SNX1Q13596 522 aa12.71□□□□□ -0.37
TRA2B-214ENST00000487615 CCNI2Q6ZMN8 369 aaPredicted RBP12.71□□□□□ -0.37
TRA2B-214ENST00000487615 KSR1Q8IVT5 923 aa12.71□□□□□ -0.37
TRA2B-214ENST00000487615 ZNF280CQ8ND82 737 aa12.71□□□□□ -0.37
TRA2B-214ENST00000487615 AGPAT1Q99943 283 aa12.71□□□□□ -0.37
TRA2B-214ENST00000487615 MIS12Q9H081 205 aa12.71□□□□□ -0.37
TRA2B-214ENST00000487615 POLR3FQ9H1D9 316 aaPredicted RBP12.71□□□□□ -0.37
TRA2B-214ENST00000487615 UNC45AQ9H3U1 944 aa12.71□□□□□ -0.37
TRA2B-214ENST00000487615 CAPN6Q9Y6Q1 641 aa12.71□□□□□ -0.37
TRA2B-214ENST00000487615 CLDN3O15551 220 aa12.71□□□□□ -0.38
TRA2B-214ENST00000487615 CTNND1O60716 968 aaKnown RBP12.71□□□□□ -0.38
TRA2B-214ENST00000487615 DGAT1O75907 488 aa12.71□□□□□ -0.38
TRA2B-214ENST00000487615 RPS6P62753 249 aaKnown RBP12.71□□□□□ -0.38
TRA2B-214ENST00000487615 SETDB1Q15047 1291 aa12.71□□□□□ -0.38
TRA2B-214ENST00000487615 PAPD7Q5XG87 772 aaKnown RBP12.71□□□□□ -0.38
TRA2B-214ENST00000487615 SPATS2Q86XZ4 545 aaKnown RBP12.71□□□□□ -0.38
TRA2B-214ENST00000487615 RSAD2Q8WXG1 361 aa12.71□□□□□ -0.38
TRA2B-214ENST00000487615 FAM167AQ96KS9 214 aa12.71□□□□□ -0.38
TRA2B-214ENST00000487615 TAF1DQ9H5J8 278 aaPredicted RBP12.71□□□□□ -0.38
TRA2B-214ENST00000487615 AGPAT3Q9NRZ7 376 aa12.71□□□□□ -0.38
TRA2B-214ENST00000487615 FAM198AQ9UFP1 575 aa12.71□□□□□ -0.38
TRA2B-214ENST00000487615 HMGB1P1B2RPK0 211 aaPredicted RBP12.7□□□□□ -0.38
TRA2B-214ENST00000487615 MARK3P27448 753 aa12.7□□□□□ -0.38
TRA2B-214ENST00000487615 YARSP54577 528 aaKnown RBP12.7□□□□□ -0.38
TRA2B-214ENST00000487615 PSMC6P62333 389 aa12.7□□□□□ -0.38
TRA2B-214ENST00000487615 ZBTB16Q05516 673 aa12.7□□□□□ -0.38
TRA2B-214ENST00000487615 DNAJC24Q6P3W2 148 aa12.7□□□□□ -0.38
TRA2B-214ENST00000487615 PHLDB2Q86SQ0 1253 aa12.7□□□□□ -0.38
TRA2B-214ENST00000487615 GPD1LQ8N335 351 aa12.7□□□□□ -0.38
TRA2B-214ENST00000487615 LRRN4CLQ8ND94 238 aa12.7□□□□□ -0.38
TRA2B-214ENST00000487615 SLC16A10Q8TF71 515 aa12.7□□□□□ -0.38
TRA2B-214ENST00000487615 SLITRK6Q9H5Y7 841 aa12.7□□□□□ -0.38
TRA2B-214ENST00000487615 FAM86B1E9PN63 330 aa12.7□□□□□ -0.38
TRA2B-214ENST00000487615 PODXLO00592 558 aa12.7□□□□□ -0.38
TRA2B-214ENST00000487615 FAM86B2P0C5J1 330 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms