RNA–Protein interactions for RNA: ENST00000487572.5

SEC22A-208, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 870 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-208ENST00000487572 TFDP1Q14186 410 aa21.7■■□□□ 1.06
SEC22A-208ENST00000487572 RASIP1Q5U651 963 aa21.7■■□□□ 1.06
SEC22A-208ENST00000487572 GPBP1Q86WP2 473 aa21.7■■□□□ 1.06
SEC22A-208ENST00000487572 LARP4BQ92615 738 aaKnown RBP21.7■■□□□ 1.06
SEC22A-208ENST00000487572 IPO9Q96P70 1041 aaKnown RBP21.7■■□□□ 1.06
SEC22A-208ENST00000487572 ERVK-5Q9HDB9 667 aa21.7■■□□□ 1.06
SEC22A-208ENST00000487572 NPHP3-ACAD11A0A0J9YXS1 232 aa21.69■■□□□ 1.06
SEC22A-208ENST00000487572 GPR182O15218 404 aa21.69■■□□□ 1.06
SEC22A-208ENST00000487572 HIP1RO75146 1068 aa21.69■■□□□ 1.06
SEC22A-208ENST00000487572 PHKA2P46019 1235 aa21.69■■□□□ 1.06
SEC22A-208ENST00000487572 WDR5P61964 334 aaKnown RBP21.69■■□□□ 1.06
SEC22A-208ENST00000487572 CAPSQ13938 189 aa21.69■■□□□ 1.06
SEC22A-208ENST00000487572 CCDC73Q6ZRK6 1079 aa21.69■■□□□ 1.06
SEC22A-208ENST00000487572 C1orf186Q6ZWK4 172 aa21.69■■□□□ 1.06
SEC22A-208ENST00000487572 BSNDQ8WZ55 320 aa21.69■■□□□ 1.06
SEC22A-208ENST00000487572 IFT122Q9HBG6 1241 aa21.69■■□□□ 1.06
SEC22A-208ENST00000487572 FAM13BQ9NYF5 915 aa21.69■■□□□ 1.06
SEC22A-208ENST00000487572 STK17AQ9UEE5 414 aa21.69■■□□□ 1.06
SEC22A-208ENST00000487572 LOXHD1Q8IVV2 1947 aa21.68■■□□□ 1.06
SEC22A-208ENST00000487572 LRRIQ4A6NIV6 560 aa21.68■■□□□ 1.06
SEC22A-208ENST00000487572 DEFB103AP81534 67 aa21.68■■□□□ 1.06
SEC22A-208ENST00000487572 CACNB1Q02641 598 aaPredicted RBP21.68■■□□□ 1.06
SEC22A-208ENST00000487572 HABP4Q5JVS0 413 aaKnown RBP21.68■■□□□ 1.06
SEC22A-208ENST00000487572 ODR4Q5SWX8 454 aa21.68■■□□□ 1.06
SEC22A-208ENST00000487572 RESP18Q5W5W9 173 aa21.68■■□□□ 1.06
SEC22A-208ENST00000487572 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.68■■□□□ 1.06
SEC22A-208ENST00000487572 KIFAP3Q92845 792 aa21.68■■□□□ 1.06
SEC22A-208ENST00000487572 TMX1Q9H3N1 280 aa21.68■■□□□ 1.06
SEC22A-208ENST00000487572 EFCAB14O75071 495 aa21.67■■□□□ 1.06
SEC22A-208ENST00000487572 KRT18P05783 430 aaKnown RBP21.67■■□□□ 1.06
SEC22A-208ENST00000487572 ATP2A2P16615 1042 aaKnown RBP21.67■■□□□ 1.06
SEC22A-208ENST00000487572 IBSPP21815 317 aaPredicted RBP21.67■■□□□ 1.06
SEC22A-208ENST00000487572 SFPQP23246 707 aaKnown RBP eCLIP21.67■■□□□ 1.06
SEC22A-208ENST00000487572 NAALADL2Q58DX5 795 aa21.67■■□□□ 1.06
SEC22A-208ENST00000487572 FAM109BQ6ICB4 259 aaPredicted RBP21.67■■□□□ 1.06
SEC22A-208ENST00000487572 TMCO2Q7Z6W1 182 aaPredicted RBP21.67■■□□□ 1.06
SEC22A-208ENST00000487572 INO80BQ9C086 356 aaPredicted RBP21.67■■□□□ 1.06
SEC22A-208ENST00000487572 MINDY3Q9H8M7 445 aa21.67■■□□□ 1.06
SEC22A-208ENST00000487572 GRXCR1A8MXD5 290 aa21.66■■□□□ 1.06
SEC22A-208ENST00000487572 AMHP03971 560 aa21.66■■□□□ 1.06
SEC22A-208ENST00000487572 GUCY2CP25092 1073 aa21.66■■□□□ 1.06
SEC22A-208ENST00000487572 PTENP60484 403 aa21.66■■□□□ 1.06
SEC22A-208ENST00000487572 ARSHQ5FYA8 562 aa21.66■■□□□ 1.06
SEC22A-208ENST00000487572 CATSPER4Q7RTX7 472 aa21.66■■□□□ 1.06
SEC22A-208ENST00000487572 SRGAP1Q7Z6B7 1085 aa21.66■■□□□ 1.06
SEC22A-208ENST00000487572 MYOCDQ8IZQ8 938 aa21.66■■□□□ 1.06
SEC22A-208ENST00000487572 DAW1Q8N136 415 aa21.66■■□□□ 1.06
SEC22A-208ENST00000487572 LINC01599Q8WXQ3 324 aa21.66■■□□□ 1.06
SEC22A-208ENST00000487572 DHX58Q96C10 678 aa21.66■■□□□ 1.06
SEC22A-208ENST00000487572 IFT74Q96LB3 600 aa21.66■■□□□ 1.06
SEC22A-208ENST00000487572 DRC1Q96MC2 740 aa21.66■■□□□ 1.06
SEC22A-208ENST00000487572 FTHL17Q9BXU8 183 aa21.66■■□□□ 1.06
SEC22A-208ENST00000487572 KCND2Q9NZV8 630 aa21.66■■□□□ 1.06
SEC22A-208ENST00000487572 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.65■■□□□ 1.06
SEC22A-208ENST00000487572 DENND3A2RUS2 1198 aa21.65■■□□□ 1.06
SEC22A-208ENST00000487572 SFI1A8K8P3 1242 aa21.65■■□□□ 1.06
SEC22A-208ENST00000487572 INO80B-WBP1J3KQ70 363 aa21.65■■□□□ 1.06
SEC22A-208ENST00000487572 MAPK7Q13164 816 aa21.65■■□□□ 1.06
SEC22A-208ENST00000487572 PPP2R5AQ15172 486 aa21.65■■□□□ 1.06
SEC22A-208ENST00000487572 ADALQ6DHV7 355 aa21.65■■□□□ 1.06
SEC22A-208ENST00000487572 FAM117BQ6P1L5 589 aa21.65■■□□□ 1.06
SEC22A-208ENST00000487572 SV2BQ7L1I2 683 aa21.65■■□□□ 1.06
SEC22A-208ENST00000487572 DEPTORQ8TB45 409 aa21.65■■□□□ 1.06
SEC22A-208ENST00000487572 SLC9A7Q96T83 725 aa21.65■■□□□ 1.06
SEC22A-208ENST00000487572 REEP2Q9BRK0 252 aa21.65■■□□□ 1.06
SEC22A-208ENST00000487572 KIFC3Q9BVG8 833 aa21.65■■□□□ 1.06
SEC22A-208ENST00000487572 TIPINQ9BVW5 301 aa21.65■■□□□ 1.06
SEC22A-208ENST00000487572 RANBP2P49792 3224 aaKnown RBP21.65■■□□□ 1.06
SEC22A-208ENST00000487572 A0A1B0GVL5 298 aa21.64■■□□□ 1.05
SEC22A-208ENST00000487572 CCDC169A6NNP5 214 aa21.64■■□□□ 1.05
SEC22A-208ENST00000487572 ENPP3O14638 875 aa21.64■■□□□ 1.05
SEC22A-208ENST00000487572 POLR2DO15514 142 aaKnown RBP21.64■■□□□ 1.05
SEC22A-208ENST00000487572 MGEA5O60502 916 aa21.64■■□□□ 1.05
SEC22A-208ENST00000487572 LIG1P18858 919 aa21.64■■□□□ 1.05
SEC22A-208ENST00000487572 NAMPTP43490 491 aa21.64■■□□□ 1.05
SEC22A-208ENST00000487572 PEX3P56589 373 aa21.64■■□□□ 1.05
SEC22A-208ENST00000487572 E2F4Q16254 413 aa21.64■■□□□ 1.05
SEC22A-208ENST00000487572 LRIT3Q3SXY7 679 aa21.64■■□□□ 1.05
SEC22A-208ENST00000487572 RTN4RL1Q86UN2 441 aaPredicted RBP21.64■■□□□ 1.05
SEC22A-208ENST00000487572 ADAM2Q99965 735 aa21.64■■□□□ 1.05
SEC22A-208ENST00000487572 KCNH3Q9ULD8 1083 aa21.64■■□□□ 1.05
SEC22A-208ENST00000487572 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.63■■□□□ 1.05
SEC22A-208ENST00000487572 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.63■■□□□ 1.05
SEC22A-208ENST00000487572 SOX1O00570 391 aaPredicted RBP21.63■■□□□ 1.05
SEC22A-208ENST00000487572 ERLIN2O94905 339 aa21.63■■□□□ 1.05
SEC22A-208ENST00000487572 UPP2O95045 317 aa21.63■■□□□ 1.05
SEC22A-208ENST00000487572 PFKFB1P16118 471 aa21.63■■□□□ 1.05
SEC22A-208ENST00000487572 ZSCAN20P17040 1043 aaPredicted RBP21.63■■□□□ 1.05
SEC22A-208ENST00000487572 CMA1P23946 247 aa21.63■■□□□ 1.05
SEC22A-208ENST00000487572 RABGGTBP53611 331 aa21.63■■□□□ 1.05
SEC22A-208ENST00000487572 MBTD1Q05BQ5 628 aa21.63■■□□□ 1.05
SEC22A-208ENST00000487572 POU5F1BQ06416 359 aa21.63■■□□□ 1.05
SEC22A-208ENST00000487572 DMP1Q13316 513 aaPredicted RBP21.63■■□□□ 1.05
SEC22A-208ENST00000487572 DYMQ7RTS9 669 aa21.63■■□□□ 1.05
SEC22A-208ENST00000487572 ZBTB8OSQ8IWT0 167 aa21.63■■□□□ 1.05
SEC22A-208ENST00000487572 IQUBQ8NA54 791 aa21.63■■□□□ 1.05
SEC22A-208ENST00000487572 STAMQ92783 540 aa21.63■■□□□ 1.05
SEC22A-208ENST00000487572 TSPYL2Q9H2G4 693 aaPredicted RBP21.63■■□□□ 1.05
SEC22A-208ENST00000487572 ZHX3Q9H4I2 956 aa21.63■■□□□ 1.05
SEC22A-208ENST00000487572 PIN4Q9Y237 131 aaKnown RBP21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms