RNA–Protein interactions for RNA: ENST00000487563.1

PLOD3-215, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 712 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-215ENST00000487563 NRIP1P48552 1158 aa26.42■■□□□ 1.82
PLOD3-215ENST00000487563 POLGP54098 1239 aaPredicted RBP26.42■■□□□ 1.82
PLOD3-215ENST00000487563 DLX2Q07687 328 aaPredicted RBP26.42■■□□□ 1.82
PLOD3-215ENST00000487563 EPHA7Q15375 998 aa26.42■■□□□ 1.82
PLOD3-215ENST00000487563 RBM23Q86U06 439 aaKnown RBP26.42■■□□□ 1.82
PLOD3-215ENST00000487563 CASD1Q96PB1 797 aa26.42■■□□□ 1.82
PLOD3-215ENST00000487563 LXNQ9BS40 222 aa26.42■■□□□ 1.82
PLOD3-215ENST00000487563 CWH43Q9H720 699 aa26.42■■□□□ 1.82
PLOD3-215ENST00000487563 A0A0U1RQF3 1178 aa26.41■■□□□ 1.82
PLOD3-215ENST00000487563 NPEPPSP55786 919 aa26.41■■□□□ 1.82
PLOD3-215ENST00000487563 ADAM15Q13444 863 aa26.41■■□□□ 1.82
PLOD3-215ENST00000487563 EXOC8Q8IYI6 725 aa26.41■■□□□ 1.82
PLOD3-215ENST00000487563 ZNF558Q96NG5 402 aa26.41■■□□□ 1.82
PLOD3-215ENST00000487563 CHST12Q9NRB3 414 aa26.41■■□□□ 1.82
PLOD3-215ENST00000487563 RNF19AQ9NV58 838 aa26.41■■□□□ 1.82
PLOD3-215ENST00000487563 CD207Q9UJ71 328 aa26.41■■□□□ 1.82
PLOD3-215ENST00000487563 PPME1Q9Y570 386 aa26.41■■□□□ 1.82
PLOD3-215ENST00000487563 PCDHGC5Q9Y5F6 944 aa26.41■■□□□ 1.82
PLOD3-215ENST00000487563 JAK2O60674 1132 aa26.4■■□□□ 1.82
PLOD3-215ENST00000487563 EOMESO95936 686 aa26.4■■□□□ 1.82
PLOD3-215ENST00000487563 TWF2Q6IBS0 349 aaKnown RBP26.4■■□□□ 1.82
PLOD3-215ENST00000487563 CATSPER4Q7RTX7 472 aa26.4■■□□□ 1.82
PLOD3-215ENST00000487563 KSR1Q8IVT5 923 aa26.4■■□□□ 1.82
PLOD3-215ENST00000487563 EFHBQ8N7U6 833 aa26.4■■□□□ 1.82
PLOD3-215ENST00000487563 KHSRPQ92945 711 aaKnown RBP eCLIP26.4■■□□□ 1.82
PLOD3-215ENST00000487563 TLE6Q9H808 572 aa26.4■■□□□ 1.82
PLOD3-215ENST00000487563 PRKAG3Q9UGI9 489 aa26.4■■□□□ 1.82
PLOD3-215ENST00000487563 PUF60Q9UHX1 559 aaKnown RBP26.4■■□□□ 1.82
PLOD3-215ENST00000487563 PIN4Q9Y237 131 aaKnown RBP26.4■■□□□ 1.82
PLOD3-215ENST00000487563 YWHABP31946 246 aaKnown RBP26.39■■□□□ 1.82
PLOD3-215ENST00000487563 PPM1AP35813 382 aa26.39■■□□□ 1.82
PLOD3-215ENST00000487563 RFC5P40937 340 aa26.39■■□□□ 1.82
PLOD3-215ENST00000487563 CYP4A11Q02928 519 aa26.39■■□□□ 1.82
PLOD3-215ENST00000487563 SMAD4Q13485 552 aaKnown RBP26.39■■□□□ 1.82
PLOD3-215ENST00000487563 CLLU1OSQ5K130 101 aa26.39■■□□□ 1.82
PLOD3-215ENST00000487563 OTUD6AQ7L8S5 288 aa26.39■■□□□ 1.82
PLOD3-215ENST00000487563 C4orf19Q8IY42 314 aa26.39■■□□□ 1.82
PLOD3-215ENST00000487563 DIS3L2Q8IYB7 885 aaKnown RBP26.39■■□□□ 1.82
PLOD3-215ENST00000487563 HELQQ8TDG4 1101 aa26.39■■□□□ 1.82
PLOD3-215ENST00000487563 TNFRSF25Q93038 417 aa26.39■■□□□ 1.82
PLOD3-215ENST00000487563 DYDC2Q96IM9 177 aa26.39■■□□□ 1.82
PLOD3-215ENST00000487563 BMP2KQ9NSY1 1161 aaPredicted RBP26.39■■□□□ 1.82
PLOD3-215ENST00000487563 RGL1Q9NZL6 768 aa26.39■■□□□ 1.82
PLOD3-215ENST00000487563 WRAP73Q9P2S5 460 aaPredicted RBP26.39■■□□□ 1.82
PLOD3-215ENST00000487563 COL4A3BPQ9Y5P4 624 aa26.39■■□□□ 1.82
PLOD3-215ENST00000487563 MBTPS2O43462 519 aa26.38■■□□□ 1.81
PLOD3-215ENST00000487563 CALCRLQ16602 461 aa26.38■■□□□ 1.81
PLOD3-215ENST00000487563 PDE12Q6L8Q7 609 aaKnown RBP26.38■■□□□ 1.81
PLOD3-215ENST00000487563 KCNT2Q6UVM3 1135 aa26.38■■□□□ 1.81
PLOD3-215ENST00000487563 LRRC55Q6ZSA7 311 aa26.38■■□□□ 1.81
PLOD3-215ENST00000487563 PSPC1Q8WXF1 523 aaKnown RBP26.38■■□□□ 1.81
PLOD3-215ENST00000487563 MRPL9Q9BYD2 267 aaKnown RBP26.38■■□□□ 1.81
PLOD3-215ENST00000487563 ZSWIM4Q9H7M6 989 aa26.38■■□□□ 1.81
PLOD3-215ENST00000487563 BTBD18B2RXH4 712 aa26.37■■□□□ 1.81
PLOD3-215ENST00000487563 SEC24BO95487 1268 aa26.37■■□□□ 1.81
PLOD3-215ENST00000487563 SKIP12755 728 aa26.37■■□□□ 1.81
PLOD3-215ENST00000487563 ZP2Q05996 745 aa26.37■■□□□ 1.81
PLOD3-215ENST00000487563 CTTNQ14247 550 aaKnown RBP26.37■■□□□ 1.81
PLOD3-215ENST00000487563 SMAD2Q15796 467 aaKnown RBP26.37■■□□□ 1.81
PLOD3-215ENST00000487563 XKR9Q5GH70 373 aa26.37■■□□□ 1.81
PLOD3-215ENST00000487563 TMEM31Q5JXX7 168 aa26.37■■□□□ 1.81
PLOD3-215ENST00000487563 ZNF598Q86UK7 904 aaKnown RBP26.37■■□□□ 1.81
PLOD3-215ENST00000487563 ADHFE1Q8IWW8 467 aa26.37■■□□□ 1.81
PLOD3-215ENST00000487563 ZNF579Q8NAF0 562 aaKnown RBP26.37■■□□□ 1.81
PLOD3-215ENST00000487563 MRPS27Q92552 414 aaKnown RBP26.37■■□□□ 1.81
PLOD3-215ENST00000487563 TMEM143Q96AN5 459 aa26.37■■□□□ 1.81
PLOD3-215ENST00000487563 DHX33Q9H6R0 707 aaKnown RBP26.37■■□□□ 1.81
PLOD3-215ENST00000487563 ENTPD7Q9NQZ7 604 aa26.37■■□□□ 1.81
PLOD3-215ENST00000487563 LZTS1Q9Y250 596 aa26.37■■□□□ 1.81
PLOD3-215ENST00000487563 FSD2A1L4K1 749 aa26.36■■□□□ 1.81
PLOD3-215ENST00000487563 NEMFO60524 1076 aa26.36■■□□□ 1.81
PLOD3-215ENST00000487563 ATF7P17544 494 aaPredicted RBP26.36■■□□□ 1.81
PLOD3-215ENST00000487563 PBX3P40426 434 aa26.36■■□□□ 1.81
PLOD3-215ENST00000487563 PHKA2P46019 1235 aa26.36■■□□□ 1.81
PLOD3-215ENST00000487563 ERVFC1P60507 584 aa26.36■■□□□ 1.81
PLOD3-215ENST00000487563 PLCB3Q01970 1234 aa26.36■■□□□ 1.81
PLOD3-215ENST00000487563 KRT17Q04695 432 aa26.36■■□□□ 1.81
PLOD3-215ENST00000487563 SPIRE1Q08AE8 756 aa26.36■■□□□ 1.81
PLOD3-215ENST00000487563 EMC2Q15006 297 aa26.36■■□□□ 1.81
PLOD3-215ENST00000487563 PLPP4Q5VZY2 271 aa26.36■■□□□ 1.81
PLOD3-215ENST00000487563 TPH2Q8IWU9 490 aa26.36■■□□□ 1.81
PLOD3-215ENST00000487563 TCP11Q8WWU5 503 aa26.36■■□□□ 1.81
PLOD3-215ENST00000487563 CCDC43Q96MW1 224 aaKnown RBP26.36■■□□□ 1.81
PLOD3-215ENST00000487563 POP1Q99575 1024 aaKnown RBP26.36■■□□□ 1.81
PLOD3-215ENST00000487563 SPG21Q9NZD8 308 aa26.36■■□□□ 1.81
PLOD3-215ENST00000487563 PCDHA12Q9UN75 941 aa26.36■■□□□ 1.81
PLOD3-215ENST00000487563 PI4K2BG5E9Z4 385 aa26.35■■□□□ 1.81
PLOD3-215ENST00000487563 PER2O15055 1255 aa26.35■■□□□ 1.81
PLOD3-215ENST00000487563 GAS2O43903 313 aaKnown RBP26.35■■□□□ 1.81
PLOD3-215ENST00000487563 SRGAP2CP0DJJ0 459 aa26.35■■□□□ 1.81
PLOD3-215ENST00000487563 RAB27AP51159 221 aa26.35■■□□□ 1.81
PLOD3-215ENST00000487563 SAFBQ15424 915 aaKnown RBP eCLIP26.35■■□□□ 1.81
PLOD3-215ENST00000487563 PRPF31Q8WWY3 499 aaKnown RBP26.35■■□□□ 1.81
PLOD3-215ENST00000487563 TCF25Q9BQ70 676 aa26.35■■□□□ 1.81
PLOD3-215ENST00000487563 BARX2Q9UMQ3 279 aaPredicted RBP26.35■■□□□ 1.81
PLOD3-215ENST00000487563 LONRF3Q496Y0 759 aa26.34■■□□□ 1.81
PLOD3-215ENST00000487563 MSLNLQ96KJ4 702 aa26.34■■□□□ 1.81
PLOD3-215ENST00000487563 CDCA3Q99618 268 aaPredicted RBP26.34■■□□□ 1.81
PLOD3-215ENST00000487563 EIF2AK1Q9BQI3 630 aaKnown RBP26.34■■□□□ 1.81
PLOD3-215ENST00000487563 LRFN3Q9BTN0 628 aa26.34■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms