RNA–Protein interactions for RNA: ENST00000487447.1

CLIP2-207, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-207ENST00000487447 KCND2Q9NZV8 630 aa12.95□□□□□ -0.34
CLIP2-207ENST00000487447 CIZ1Q9ULV3 898 aaPredicted RBP12.95□□□□□ -0.34
CLIP2-207ENST00000487447 ST3GAL5Q9UNP4 418 aa12.95□□□□□ -0.34
CLIP2-207ENST00000487447 ATP6V1DQ9Y5K8 247 aa12.95□□□□□ -0.34
CLIP2-207ENST00000487447 TTC3P53804 2025 aa12.95□□□□□ -0.34
CLIP2-207ENST00000487447 PLCG1P19174 1290 aa12.94□□□□□ -0.34
CLIP2-207ENST00000487447 PTENP60484 403 aa12.94□□□□□ -0.34
CLIP2-207ENST00000487447 KRT85P78386 507 aa12.94□□□□□ -0.34
CLIP2-207ENST00000487447 DEFB103AP81534 67 aa12.94□□□□□ -0.34
CLIP2-207ENST00000487447 MAPK7Q13164 816 aa12.94□□□□□ -0.34
CLIP2-207ENST00000487447 KARSQ15046 597 aaKnown RBP12.94□□□□□ -0.34
CLIP2-207ENST00000487447 PCBP1Q15365 356 aaKnown RBP eCLIP12.94□□□□□ -0.34
CLIP2-207ENST00000487447 NAALADL2Q58DX5 795 aa12.94□□□□□ -0.34
CLIP2-207ENST00000487447 CDCA2Q69YH5 1023 aaPredicted RBP12.94□□□□□ -0.34
CLIP2-207ENST00000487447 RINT1Q6NUQ1 792 aa12.94□□□□□ -0.34
CLIP2-207ENST00000487447 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.94□□□□□ -0.34
CLIP2-207ENST00000487447 SRGAP1Q7Z6B7 1085 aa12.94□□□□□ -0.34
CLIP2-207ENST00000487447 RTN4RL1Q86UN2 441 aaPredicted RBP12.94□□□□□ -0.34
CLIP2-207ENST00000487447 HERC6Q8IVU3 1022 aa12.94□□□□□ -0.34
CLIP2-207ENST00000487447 DAW1Q8N136 415 aa12.94□□□□□ -0.34
CLIP2-207ENST00000487447 MAFAQ8NHW3 353 aaPredicted RBP12.94□□□□□ -0.34
CLIP2-207ENST00000487447 NLRP7Q8WX94 980 aa12.94□□□□□ -0.34
CLIP2-207ENST00000487447 KCNN1Q92952 543 aa12.94□□□□□ -0.34
CLIP2-207ENST00000487447 CDK5RAP3Q96JB5 506 aa12.94□□□□□ -0.34
CLIP2-207ENST00000487447 TRAIPQ9BWF2 469 aa12.94□□□□□ -0.34
CLIP2-207ENST00000487447 GCOM2Q9BZD3 368 aaPredicted RBP12.94□□□□□ -0.34
CLIP2-207ENST00000487447 INO80BQ9C086 356 aaPredicted RBP12.94□□□□□ -0.34
CLIP2-207ENST00000487447 POLR3FQ9H1D9 316 aaPredicted RBP12.94□□□□□ -0.34
CLIP2-207ENST00000487447 TSPYL2Q9H2G4 693 aaPredicted RBP12.94□□□□□ -0.34
CLIP2-207ENST00000487447 GPRC5CQ9NQ84 441 aa12.94□□□□□ -0.34
CLIP2-207ENST00000487447 BMP2KQ9NSY1 1161 aaPredicted RBP12.94□□□□□ -0.34
CLIP2-207ENST00000487447 STK17AQ9UEE5 414 aa12.94□□□□□ -0.34
CLIP2-207ENST00000487447 MYH11P35749 1972 aa12.94□□□□□ -0.34
CLIP2-207ENST00000487447 TMEM265A0A087WTH1 108 aa12.93□□□□□ -0.34
CLIP2-207ENST00000487447 ZBBXA8MT70 800 aa12.93□□□□□ -0.34
CLIP2-207ENST00000487447 ENPP3O14638 875 aa12.93□□□□□ -0.34
CLIP2-207ENST00000487447 MGEA5O60502 916 aa12.93□□□□□ -0.34
CLIP2-207ENST00000487447 PLA2G4BP0C869 781 aa12.93□□□□□ -0.34
CLIP2-207ENST00000487447 ATP2A2P16615 1042 aaKnown RBP12.93□□□□□ -0.34
CLIP2-207ENST00000487447 ANP32AP39687 249 aaKnown RBP12.93□□□□□ -0.34
CLIP2-207ENST00000487447 TXLNAP40222 546 aa12.93□□□□□ -0.34
CLIP2-207ENST00000487447 KCNJ6P48051 423 aa12.93□□□□□ -0.34
CLIP2-207ENST00000487447 HTRA4P83105 476 aaPredicted RBP12.93□□□□□ -0.34
CLIP2-207ENST00000487447 ARSHQ5FYA8 562 aa12.93□□□□□ -0.34
CLIP2-207ENST00000487447 SHC4Q6S5L8 630 aa12.93□□□□□ -0.34
CLIP2-207ENST00000487447 LEO1Q8WVC0 666 aaPredicted RBP12.93□□□□□ -0.34
CLIP2-207ENST00000487447 RAD54LQ92698 747 aa12.93□□□□□ -0.34
CLIP2-207ENST00000487447 KIFAP3Q92845 792 aa12.93□□□□□ -0.34
CLIP2-207ENST00000487447 TOP1MTQ969P6 601 aa12.93□□□□□ -0.34
CLIP2-207ENST00000487447 NLRP4Q96MN2 994 aa12.93□□□□□ -0.34
CLIP2-207ENST00000487447 PPP1R16BQ96T49 567 aa12.93□□□□□ -0.34
CLIP2-207ENST00000487447 RUSC1Q9BVN2 902 aa12.93□□□□□ -0.34
CLIP2-207ENST00000487447 RC3H2Q9HBD1 1191 aaKnown RBP12.93□□□□□ -0.34
CLIP2-207ENST00000487447 RGS18Q9NS28 235 aa12.93□□□□□ -0.34
CLIP2-207ENST00000487447 DAXXQ9UER7 740 aaPredicted RBP12.93□□□□□ -0.34
CLIP2-207ENST00000487447 CCDC39Q9UFE4 941 aa12.93□□□□□ -0.34
CLIP2-207ENST00000487447 PCDHA7Q9UN72 937 aa12.93□□□□□ -0.34
CLIP2-207ENST00000487447 GINS2Q9Y248 185 aa12.93□□□□□ -0.34
CLIP2-207ENST00000487447 RALGAPA2Q2PPJ7 1873 aa12.93□□□□□ -0.34
CLIP2-207ENST00000487447 CHD9Q3L8U1 2897 aa12.92□□□□□ -0.34
CLIP2-207ENST00000487447 A0A087X0B3 334 aa12.92□□□□□ -0.34
CLIP2-207ENST00000487447 GJB5O95377 273 aa12.92□□□□□ -0.34
CLIP2-207ENST00000487447 AMHP03971 560 aa12.92□□□□□ -0.34
CLIP2-207ENST00000487447 SFPQP23246 707 aaKnown RBP eCLIP12.92□□□□□ -0.34
CLIP2-207ENST00000487447 NAMPTP43490 491 aa12.92□□□□□ -0.34
CLIP2-207ENST00000487447 PHKA2P46019 1235 aa12.92□□□□□ -0.34
CLIP2-207ENST00000487447 FAM189BP81408 668 aa12.92□□□□□ -0.34
CLIP2-207ENST00000487447 TFDP1Q14186 410 aa12.92□□□□□ -0.34
CLIP2-207ENST00000487447 AMHR2Q16671 573 aa12.92□□□□□ -0.34
CLIP2-207ENST00000487447 FOXD4L6Q3SYB3 417 aaPredicted RBP12.92□□□□□ -0.34
CLIP2-207ENST00000487447 SPECC1Q5M775 1068 aa12.92□□□□□ -0.34
CLIP2-207ENST00000487447 RESP18Q5W5W9 173 aa12.92□□□□□ -0.34
CLIP2-207ENST00000487447 FOXD4L3Q6VB84 417 aaPredicted RBP12.92□□□□□ -0.34
CLIP2-207ENST00000487447 PPP4R3CPQ6ZMV5 832 aa12.92□□□□□ -0.34
CLIP2-207ENST00000487447 RNF149Q8NC42 400 aa12.92□□□□□ -0.34
CLIP2-207ENST00000487447 SP7Q8TDD2 431 aaPredicted RBP12.92□□□□□ -0.34
CLIP2-207ENST00000487447 BSNDQ8WZ55 320 aa12.92□□□□□ -0.34
CLIP2-207ENST00000487447 LARP4BQ92615 738 aaKnown RBP12.92□□□□□ -0.34
CLIP2-207ENST00000487447 ZNF668Q96K58 619 aaPredicted RBP12.92□□□□□ -0.34
CLIP2-207ENST00000487447 PBX4Q9BYU1 374 aa12.92□□□□□ -0.34
CLIP2-207ENST00000487447 MINDY3Q9H8M7 445 aa12.92□□□□□ -0.34
CLIP2-207ENST00000487447 C17orf75Q9HAS0 396 aa12.92□□□□□ -0.34
CLIP2-207ENST00000487447 CHST12Q9NRB3 414 aa12.92□□□□□ -0.34
CLIP2-207ENST00000487447 C1orf112Q9NSG2 853 aa12.92□□□□□ -0.34
CLIP2-207ENST00000487447 AGPAT5Q9NUQ2 364 aa12.92□□□□□ -0.34
CLIP2-207ENST00000487447 PCDHA11Q9Y5I1 949 aa12.92□□□□□ -0.34
CLIP2-207ENST00000487447 KIAA1671Q9BY89 1806 aa12.92□□□□□ -0.34
CLIP2-207ENST00000487447 FNDC1Q4ZHG4 1894 aaPredicted RBP12.91□□□□□ -0.34
CLIP2-207ENST00000487447 FAM237AA0A1B0GTK4 181 aa12.91□□□□□ -0.34
CLIP2-207ENST00000487447 GRXCR1A8MXD5 290 aa12.91□□□□□ -0.34
CLIP2-207ENST00000487447 C9IYK1 514 aa12.91□□□□□ -0.34
CLIP2-207ENST00000487447 SRGAP2CP0DJJ0 459 aa12.91□□□□□ -0.34
CLIP2-207ENST00000487447 FOSL2P15408 326 aa12.91□□□□□ -0.34
CLIP2-207ENST00000487447 ZNF131P52739 623 aa12.91□□□□□ -0.34
CLIP2-207ENST00000487447 MBTD1Q05BQ5 628 aa12.91□□□□□ -0.34
CLIP2-207ENST00000487447 NFX1Q12986 1120 aaKnown RBP12.91□□□□□ -0.34
CLIP2-207ENST00000487447 GRIN2CQ14957 1233 aa12.91□□□□□ -0.34
CLIP2-207ENST00000487447 PPP2R5AQ15172 486 aa12.91□□□□□ -0.34
CLIP2-207ENST00000487447 ZRSR1Q15695 479 aaKnown RBP12.91□□□□□ -0.34
CLIP2-207ENST00000487447 RAB30Q15771 203 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms