RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 CELF4Q9BZC1 486 aaKnown RBP8.04□□□□□ -1.12
UBE4B-209ENST00000487244 KDM4CQ9H3R0 1056 aa8.04□□□□□ -1.12
UBE4B-209ENST00000487244 TTC12Q9H892 705 aaPredicted RBP8.04□□□□□ -1.12
UBE4B-209ENST00000487244 RGL1Q9NZL6 768 aa8.04□□□□□ -1.12
UBE4B-209ENST00000487244 MSRAQ9UJ68 235 aa8.04□□□□□ -1.12
UBE4B-209ENST00000487244 GINS2Q9Y248 185 aa8.04□□□□□ -1.12
UBE4B-209ENST00000487244 FCF1Q9Y324 198 aaKnown RBP8.04□□□□□ -1.12
UBE4B-209ENST00000487244 PCDHA11Q9Y5I1 949 aa8.04□□□□□ -1.12
UBE4B-209ENST00000487244 TRPV2Q9Y5S1 764 aa8.04□□□□□ -1.12
UBE4B-209ENST00000487244 A0A0C4DFX4 3053 aa8.04□□□□□ -1.12
UBE4B-209ENST00000487244 UNC80Q8N2C7 3258 aa8.04□□□□□ -1.12
UBE4B-209ENST00000487244 FNDC1Q4ZHG4 1894 aaPredicted RBP8.03□□□□□ -1.12
UBE4B-209ENST00000487244 A0A087WWV3 80 aa8.03□□□□□ -1.12
UBE4B-209ENST00000487244 EPOPA6NHQ4 379 aa8.03□□□□□ -1.12
UBE4B-209ENST00000487244 MARCH6O60337 910 aa8.03□□□□□ -1.12
UBE4B-209ENST00000487244 GPR32O75388 356 aa8.03□□□□□ -1.12
UBE4B-209ENST00000487244 U2AF2P26368 475 aaKnown RBP eCLIP8.03□□□□□ -1.12
UBE4B-209ENST00000487244 TXKP42681 527 aa8.03□□□□□ -1.12
UBE4B-209ENST00000487244 QARSP47897 775 aaKnown RBP8.03□□□□□ -1.12
UBE4B-209ENST00000487244 MCM2P49736 904 aa8.03□□□□□ -1.12
UBE4B-209ENST00000487244 NPEPPSP55786 919 aa8.03□□□□□ -1.12
UBE4B-209ENST00000487244 PSMC5P62195 406 aa8.03□□□□□ -1.12
UBE4B-209ENST00000487244 GNL2Q13823 731 aaKnown RBP8.03□□□□□ -1.12
UBE4B-209ENST00000487244 XKR3Q5GH77 459 aa8.03□□□□□ -1.12
UBE4B-209ENST00000487244 TTC38Q5R3I4 469 aa8.03□□□□□ -1.12
UBE4B-209ENST00000487244 IER5Q5VY09 327 aa8.03□□□□□ -1.12
UBE4B-209ENST00000487244 PPP2R2DQ66LE6 453 aa8.03□□□□□ -1.12
UBE4B-209ENST00000487244 EFCAB12Q6NXP0 572 aa8.03□□□□□ -1.12
UBE4B-209ENST00000487244 TSHZ1Q6ZSZ6 1077 aa8.03□□□□□ -1.12
UBE4B-209ENST00000487244 SLFN12Q8IYM2 578 aa8.03□□□□□ -1.12
UBE4B-209ENST00000487244 MYOCDQ8IZQ8 938 aa8.03□□□□□ -1.12
UBE4B-209ENST00000487244 PHOSPHO2Q8TCD6 241 aa8.03□□□□□ -1.12
UBE4B-209ENST00000487244 TNPO1Q92973 898 aaKnown RBP8.03□□□□□ -1.12
UBE4B-209ENST00000487244 DYDC2Q96IM9 177 aa8.03□□□□□ -1.12
UBE4B-209ENST00000487244 OSMRQ99650 979 aa8.03□□□□□ -1.12
UBE4B-209ENST00000487244 LXNQ9BS40 222 aa8.03□□□□□ -1.12
UBE4B-209ENST00000487244 NIFKQ9BYG3 293 aaKnown RBP8.03□□□□□ -1.12
UBE4B-209ENST00000487244 TMX1Q9H3N1 280 aa8.03□□□□□ -1.12
UBE4B-209ENST00000487244 PRDM12Q9H4Q4 367 aa8.03□□□□□ -1.12
UBE4B-209ENST00000487244 CERS4Q9HA82 394 aa8.03□□□□□ -1.12
UBE4B-209ENST00000487244 SUGCTQ9HAC7 445 aa8.03□□□□□ -1.12
UBE4B-209ENST00000487244 PCDHB6Q9Y5E3 794 aa8.03□□□□□ -1.12
UBE4B-209ENST00000487244 BRWD1Q9NSI6 2320 aa8.03□□□□□ -1.12
UBE4B-209ENST00000487244 MYO7AQ13402 2215 aa8.03□□□□□ -1.12
UBE4B-209ENST00000487244 MYH15Q9Y2K3 1946 aa8.03□□□□□ -1.12
UBE4B-209ENST00000487244 KDM3AQ9Y4C1 1321 aa8.03□□□□□ -1.12
UBE4B-209ENST00000487244 RALGAPA2Q2PPJ7 1873 aa8.02□□□□□ -1.12
UBE4B-209ENST00000487244 TMEM265A0A087WTH1 108 aa8.02□□□□□ -1.13
UBE4B-209ENST00000487244 M0QZ92 97 aa8.02□□□□□ -1.13
UBE4B-209ENST00000487244 RFXAPO00287 272 aa8.02□□□□□ -1.13
UBE4B-209ENST00000487244 SPTLC1O15269 473 aa8.02□□□□□ -1.13
UBE4B-209ENST00000487244 ZBTB24O43167 697 aaPredicted RBP8.02□□□□□ -1.13
UBE4B-209ENST00000487244 MGEA5O60502 916 aa8.02□□□□□ -1.13
UBE4B-209ENST00000487244 UPP2O95045 317 aa8.02□□□□□ -1.13
UBE4B-209ENST00000487244 GJB5O95377 273 aa8.02□□□□□ -1.13
UBE4B-209ENST00000487244 BAG4O95429 457 aaKnown RBP8.02□□□□□ -1.13
UBE4B-209ENST00000487244 OR52Z1P0C646 297 aa8.02□□□□□ -1.13
UBE4B-209ENST00000487244 MMP16P51512 607 aa8.02□□□□□ -1.13
UBE4B-209ENST00000487244 TAP1Q03518 808 aa8.02□□□□□ -1.13
UBE4B-209ENST00000487244 TBC1D8BQ0IIM8 1120 aa8.02□□□□□ -1.13
UBE4B-209ENST00000487244 CUL4AQ13619 759 aa8.02□□□□□ -1.13
UBE4B-209ENST00000487244 ADGRE1Q14246 886 aa8.02□□□□□ -1.13
UBE4B-209ENST00000487244 EPHA7Q15375 998 aa8.02□□□□□ -1.13
UBE4B-209ENST00000487244 MCTP1Q6DN14 999 aa8.02□□□□□ -1.13
UBE4B-209ENST00000487244 LIAT1Q6ZQX7 453 aa8.02□□□□□ -1.13
UBE4B-209ENST00000487244 RTN4RL1Q86UN2 441 aaPredicted RBP8.02□□□□□ -1.13
UBE4B-209ENST00000487244 C4orf32Q8N8J7 132 aa8.02□□□□□ -1.13
UBE4B-209ENST00000487244 EIF2AK1Q9BQI3 630 aaKnown RBP8.02□□□□□ -1.13
UBE4B-209ENST00000487244 ADAMTS10Q9H324 1103 aa8.02□□□□□ -1.13
UBE4B-209ENST00000487244 SLC28A3Q9HAS3 691 aa8.02□□□□□ -1.13
UBE4B-209ENST00000487244 ERVK-5Q9HDB9 667 aa8.02□□□□□ -1.13
UBE4B-209ENST00000487244 NRBP2Q9NSY0 501 aa8.02□□□□□ -1.13
UBE4B-209ENST00000487244 PADI3Q9ULW8 664 aa8.02□□□□□ -1.13
UBE4B-209ENST00000487244 PCDHA12Q9UN75 941 aa8.02□□□□□ -1.13
UBE4B-209ENST00000487244 CEP131Q9UPN4 1083 aa8.02□□□□□ -1.13
UBE4B-209ENST00000487244 SMC3Q9UQE7 1217 aa8.02□□□□□ -1.13
UBE4B-209ENST00000487244 AKT3Q9Y243 479 aa8.02□□□□□ -1.13
UBE4B-209ENST00000487244 STXBP5LQ9Y2K9 1186 aa8.02□□□□□ -1.13
UBE4B-209ENST00000487244 NOC2LQ9Y3T9 749 aaKnown RBP8.02□□□□□ -1.13
UBE4B-209ENST00000487244 IGKV6-21A0A0C4DH24 114 aa8.01□□□□□ -1.13
UBE4B-209ENST00000487244 ENPP3O14638 875 aa8.01□□□□□ -1.13
UBE4B-209ENST00000487244 MAGEB2O15479 319 aa8.01□□□□□ -1.13
UBE4B-209ENST00000487244 EFCAB14O75071 495 aa8.01□□□□□ -1.13
UBE4B-209ENST00000487244 MED24O75448 989 aa8.01□□□□□ -1.13
UBE4B-209ENST00000487244 CSDE1O75534 798 aaKnown RBP8.01□□□□□ -1.13
UBE4B-209ENST00000487244 DXOO77932 396 aaKnown RBP8.01□□□□□ -1.13
UBE4B-209ENST00000487244 SLITRK3O94933 977 aa8.01□□□□□ -1.13
UBE4B-209ENST00000487244 AMHP03971 560 aa8.01□□□□□ -1.13
UBE4B-209ENST00000487244 P4HBP07237 508 aaKnown RBP8.01□□□□□ -1.13
UBE4B-209ENST00000487244 SPATA31C1P0DKV0 1188 aa8.01□□□□□ -1.13
UBE4B-209ENST00000487244 FGFR4P22455 802 aa8.01□□□□□ -1.13
UBE4B-209ENST00000487244 YWHABP31946 246 aaKnown RBP8.01□□□□□ -1.13
UBE4B-209ENST00000487244 TECP42680 631 aa8.01□□□□□ -1.13
UBE4B-209ENST00000487244 NLRP11P59045 1033 aaKnown RBP8.01□□□□□ -1.13
UBE4B-209ENST00000487244 NFX1Q12986 1120 aaKnown RBP8.01□□□□□ -1.13
UBE4B-209ENST00000487244 PAK2Q13177 524 aa8.01□□□□□ -1.13
UBE4B-209ENST00000487244 IL17AQ16552 155 aa8.01□□□□□ -1.13
UBE4B-209ENST00000487244 PLA2G2CQ5R387 149 aa8.01□□□□□ -1.13
UBE4B-209ENST00000487244 FAM228AQ86W67 206 aa8.01□□□□□ -1.13
UBE4B-209ENST00000487244 KSR1Q8IVT5 923 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms