RNA–Protein interactions for RNA: ENST00000487147.5

COL6A4P1-202, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

BASIC

Gene COL6A4P1, Length 4,317 nt, Biotype transcribed unprocessed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-202ENST00000487147 ESRRAP11474 423 aaPredicted RBP8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 ATF7P17544 494 aaPredicted RBP8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 PHBP35232 272 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 FNTAP49354 379 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 ALDH5A1P51649 535 aaPredicted RBP8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 EDRF1Q3B7T1 1238 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 ZNF746Q6NUN9 644 aaPredicted RBP8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 TMEM154Q6P9G4 183 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 POTEGQ6S5H5 508 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 POTEEQ6S8J3 1075 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 NSMFQ6X4W1 530 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 DAGLBQ8NCG7 672 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 C1orf131Q8NDD1 294 aaKnown RBP8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 SH3RF3Q8TEJ3 882 aaPredicted RBP8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 BAP1Q92560 729 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 VTI1AQ96AJ9 217 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 FAM84BQ96KN1 310 aaPredicted RBP8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 TUBB6Q9BUF5 446 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 BSDC1Q9NW68 430 aaPredicted RBP8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 SALL4Q9UJQ4 1053 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 MST1RQ04912 1400 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 PITPNM2Q9BZ72 1349 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 SMIM22K7EJ46 135 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 C21orf2O43822 256 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 CRKLP46109 303 aaKnown RBP8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 IFI35P80217 286 aaPredicted RBP8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 MFSD4BQ5TF39 518 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 C12orf60Q5U649 245 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 LRP10Q7Z4F1 713 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 ADGRA1Q86SQ6 560 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 PALM2Q8IXS6 379 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 CCDC89Q8N998 374 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 DNAJC9Q8WXX5 260 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 CCDC127Q96BQ5 260 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 RIOK1Q9BRS2 568 aaKnown RBP8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 SEMA4AQ9H3S1 761 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 ABCF3Q9NUQ8 709 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 AIPL1Q9NZN9 384 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 MINPP1Q9UNW1 487 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 USH1CQ9Y6N9 552 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 A0A0G2JND7 137 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 K7ENM7 598 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 UFL1O94874 794 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 GGPS1O95749 300 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 CYP19A1P11511 503 aaPredicted RBP8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 KCNJ1P48048 391 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 MKRN4PQ13434 485 aaPredicted RBP8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 RCN2Q14257 317 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 WDR44Q5JSH3 913 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 SH2D4BQ5SQS7 431 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 GPATCH4Q5T3I0 446 aaKnown RBP8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 KAZNQ674X7 775 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 TRIM59Q8IWR1 403 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 MARCH10Q8NA82 808 aaPredicted RBP8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 C1orf54Q8WWF1 131 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 FGD4Q96M96 766 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 DHX36Q9H2U1 1008 aaKnown RBP8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 DLGAP2Q9P1A6 1054 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 DCTN4Q9UJW0 460 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 ALG6Q9Y672 507 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 AKAP12Q02952 1782 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 PNMA6FA0A0J9YX94 578 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 GAS7O60861 476 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 CDH16O75309 829 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 SPAG7O75391 227 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 FXR2P51116 673 aaKnown RBP eCLIP8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 ACCSLQ4AC99 568 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 ERFEQ4G0M1 354 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 SBK1Q52WX2 424 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 KCTD1Q719H9 257 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 MAGEC3Q8TD91 643 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 TEKT4Q8WW24 435 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 CEP95Q96GE4 821 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 PARVGQ9HBI0 331 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 DDX39AO00148 427 aaKnown RBP8.21□□□□□ -1.09
COL6A4P1-202ENST00000487147 PDXKO00764 312 aa8.21□□□□□ -1.09
COL6A4P1-202ENST00000487147 TMEM253P0C7T8 217 aa8.21□□□□□ -1.09
COL6A4P1-202ENST00000487147 DLATP10515 647 aaKnown RBP8.21□□□□□ -1.09
COL6A4P1-202ENST00000487147 KRT17Q04695 432 aa8.21□□□□□ -1.09
COL6A4P1-202ENST00000487147 MFSD14BQ5SR56 506 aa8.21□□□□□ -1.09
COL6A4P1-202ENST00000487147 BTNL9Q6UXG8 535 aa8.21□□□□□ -1.09
COL6A4P1-202ENST00000487147 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.21□□□□□ -1.09
COL6A4P1-202ENST00000487147 PRCCQ92733 491 aaPredicted RBP8.21□□□□□ -1.09
COL6A4P1-202ENST00000487147 CENPTQ96BT3 561 aa8.21□□□□□ -1.09
COL6A4P1-202ENST00000487147 PGM2Q96G03 612 aa8.21□□□□□ -1.09
COL6A4P1-202ENST00000487147 LBHD1Q9BQE6 289 aaPredicted RBP8.21□□□□□ -1.09
COL6A4P1-202ENST00000487147 PCIF1Q9H4Z3 704 aa8.21□□□□□ -1.09
COL6A4P1-202ENST00000487147 SYNCQ9H7C4 482 aa8.21□□□□□ -1.09
COL6A4P1-202ENST00000487147 OSGEPQ9NPF4 335 aa8.21□□□□□ -1.09
COL6A4P1-202ENST00000487147 PFDN1O60925 122 aa8.21□□□□□ -1.1
COL6A4P1-202ENST00000487147 CFBP00751 764 aa8.21□□□□□ -1.1
COL6A4P1-202ENST00000487147 CAV1Q03135 178 aa8.21□□□□□ -1.1
COL6A4P1-202ENST00000487147 LMNB2Q03252 620 aa8.21□□□□□ -1.1
COL6A4P1-202ENST00000487147 FUT2Q10981 343 aa8.21□□□□□ -1.1
COL6A4P1-202ENST00000487147 NR1H3Q13133 447 aa8.21□□□□□ -1.1
COL6A4P1-202ENST00000487147 KYNUQ16719 465 aa8.21□□□□□ -1.1
COL6A4P1-202ENST00000487147 KCTD19Q17RG1 926 aaPredicted RBP8.21□□□□□ -1.1
COL6A4P1-202ENST00000487147 ANKRD20A2Q5SQ80 823 aa8.21□□□□□ -1.1
COL6A4P1-202ENST00000487147 ANKRD20A1Q5TYW2 823 aa8.21□□□□□ -1.1
COL6A4P1-202ENST00000487147 GJB7Q6PEY0 223 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms