RNA–Protein interactions for RNA: ENST00000487147.5

COL6A4P1-202, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

BASIC

Gene COL6A4P1, Length 4,317 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-202ENST00000487147 ESRRAP11474 423 aaPredicted RBP8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 ATF7P17544 494 aaPredicted RBP8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 PHBP35232 272 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 FNTAP49354 379 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 ALDH5A1P51649 535 aaPredicted RBP8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 EDRF1Q3B7T1 1238 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 ZNF746Q6NUN9 644 aaPredicted RBP8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 TMEM154Q6P9G4 183 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 POTEGQ6S5H5 508 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 POTEEQ6S8J3 1075 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 NSMFQ6X4W1 530 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 DAGLBQ8NCG7 672 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 C1orf131Q8NDD1 294 aaKnown RBP8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 SH3RF3Q8TEJ3 882 aaPredicted RBP8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 BAP1Q92560 729 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 VTI1AQ96AJ9 217 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 FAM84BQ96KN1 310 aaPredicted RBP8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 TUBB6Q9BUF5 446 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 BSDC1Q9NW68 430 aaPredicted RBP8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 SALL4Q9UJQ4 1053 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 MST1RQ04912 1400 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 PITPNM2Q9BZ72 1349 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 SMIM22K7EJ46 135 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 C21orf2O43822 256 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 CRKLP46109 303 aaKnown RBP8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 IFI35P80217 286 aaPredicted RBP8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 MFSD4BQ5TF39 518 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 C12orf60Q5U649 245 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 LRP10Q7Z4F1 713 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 ADGRA1Q86SQ6 560 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 PALM2Q8IXS6 379 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 CCDC89Q8N998 374 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 DNAJC9Q8WXX5 260 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 CCDC127Q96BQ5 260 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 RIOK1Q9BRS2 568 aaKnown RBP8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 SEMA4AQ9H3S1 761 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 ABCF3Q9NUQ8 709 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 AIPL1Q9NZN9 384 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 MINPP1Q9UNW1 487 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 USH1CQ9Y6N9 552 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 A0A0G2JND7 137 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 K7ENM7 598 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 UFL1O94874 794 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 GGPS1O95749 300 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 CYP19A1P11511 503 aaPredicted RBP8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 KCNJ1P48048 391 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 MKRN4PQ13434 485 aaPredicted RBP8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 RCN2Q14257 317 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 WDR44Q5JSH3 913 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 SH2D4BQ5SQS7 431 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 GPATCH4Q5T3I0 446 aaKnown RBP8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 KAZNQ674X7 775 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 TRIM59Q8IWR1 403 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 MARCH10Q8NA82 808 aaPredicted RBP8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 C1orf54Q8WWF1 131 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 FGD4Q96M96 766 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 DHX36Q9H2U1 1008 aaKnown RBP8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 DLGAP2Q9P1A6 1054 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 DCTN4Q9UJW0 460 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 ALG6Q9Y672 507 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 AKAP12Q02952 1782 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 PNMA6FA0A0J9YX94 578 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 GAS7O60861 476 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 CDH16O75309 829 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 SPAG7O75391 227 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 FXR2P51116 673 aaKnown RBP eCLIP8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 ACCSLQ4AC99 568 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 ERFEQ4G0M1 354 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 SBK1Q52WX2 424 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 KCTD1Q719H9 257 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 MAGEC3Q8TD91 643 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 TEKT4Q8WW24 435 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 CEP95Q96GE4 821 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 PARVGQ9HBI0 331 aa8.22□□□□□ -1.09
COL6A4P1-202ENST00000487147 DDX39AO00148 427 aaKnown RBP8.21□□□□□ -1.09
COL6A4P1-202ENST00000487147 PDXKO00764 312 aa8.21□□□□□ -1.09
COL6A4P1-202ENST00000487147 TMEM253P0C7T8 217 aa8.21□□□□□ -1.09
COL6A4P1-202ENST00000487147 DLATP10515 647 aaKnown RBP8.21□□□□□ -1.09
COL6A4P1-202ENST00000487147 KRT17Q04695 432 aa8.21□□□□□ -1.09
COL6A4P1-202ENST00000487147 MFSD14BQ5SR56 506 aa8.21□□□□□ -1.09
COL6A4P1-202ENST00000487147 BTNL9Q6UXG8 535 aa8.21□□□□□ -1.09
COL6A4P1-202ENST00000487147 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.21□□□□□ -1.09
COL6A4P1-202ENST00000487147 PRCCQ92733 491 aaPredicted RBP8.21□□□□□ -1.09
COL6A4P1-202ENST00000487147 CENPTQ96BT3 561 aa8.21□□□□□ -1.09
COL6A4P1-202ENST00000487147 PGM2Q96G03 612 aa8.21□□□□□ -1.09
COL6A4P1-202ENST00000487147 LBHD1Q9BQE6 289 aaPredicted RBP8.21□□□□□ -1.09
COL6A4P1-202ENST00000487147 PCIF1Q9H4Z3 704 aa8.21□□□□□ -1.09
COL6A4P1-202ENST00000487147 SYNCQ9H7C4 482 aa8.21□□□□□ -1.09
COL6A4P1-202ENST00000487147 OSGEPQ9NPF4 335 aa8.21□□□□□ -1.09
COL6A4P1-202ENST00000487147 PFDN1O60925 122 aa8.21□□□□□ -1.1
COL6A4P1-202ENST00000487147 CFBP00751 764 aa8.21□□□□□ -1.1
COL6A4P1-202ENST00000487147 CAV1Q03135 178 aa8.21□□□□□ -1.1
COL6A4P1-202ENST00000487147 LMNB2Q03252 620 aa8.21□□□□□ -1.1
COL6A4P1-202ENST00000487147 FUT2Q10981 343 aa8.21□□□□□ -1.1
COL6A4P1-202ENST00000487147 NR1H3Q13133 447 aa8.21□□□□□ -1.1
COL6A4P1-202ENST00000487147 KYNUQ16719 465 aa8.21□□□□□ -1.1
COL6A4P1-202ENST00000487147 KCTD19Q17RG1 926 aaPredicted RBP8.21□□□□□ -1.1
COL6A4P1-202ENST00000487147 ANKRD20A2Q5SQ80 823 aa8.21□□□□□ -1.1
COL6A4P1-202ENST00000487147 ANKRD20A1Q5TYW2 823 aa8.21□□□□□ -1.1
COL6A4P1-202ENST00000487147 GJB7Q6PEY0 223 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms