RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 ABHD16BQ9H3Z7 469 aa7.74□□□□□ -1.17
SF3A3-206ENST00000487062 SMARCAD1Q9H4L7 1026 aa7.74□□□□□ -1.17
SF3A3-206ENST00000487062 RRAGDQ9NQL2 400 aaPredicted RBP7.74□□□□□ -1.17
SF3A3-206ENST00000487062 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.74□□□□□ -1.17
SF3A3-206ENST00000487062 ARMCX3Q9UH62 379 aaPredicted RBP7.74□□□□□ -1.17
SF3A3-206ENST00000487062 CPA4Q9UI42 421 aa7.74□□□□□ -1.17
SF3A3-206ENST00000487062 ABT1Q9ULW3 272 aaKnown RBP7.74□□□□□ -1.17
SF3A3-206ENST00000487062 PYCARDQ9ULZ3 195 aa7.74□□□□□ -1.17
SF3A3-206ENST00000487062 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.74□□□□□ -1.17
SF3A3-206ENST00000487062 MGAMO43451 1857 aa7.74□□□□□ -1.17
SF3A3-206ENST00000487062 EMSYQ7Z589 1322 aa7.74□□□□□ -1.17
SF3A3-206ENST00000487062 ADGRA2Q96PE1 1338 aa7.74□□□□□ -1.17
SF3A3-206ENST00000487062 RBM47A0AV96 593 aaKnown RBP7.73□□□□□ -1.17
SF3A3-206ENST00000487062 TMEM150BA6NC51 233 aa7.73□□□□□ -1.17
SF3A3-206ENST00000487062 TMEM88BA6NKF7 163 aa7.73□□□□□ -1.17
SF3A3-206ENST00000487062 CCDC169A6NNP5 214 aa7.73□□□□□ -1.17
SF3A3-206ENST00000487062 IGF2BP3O00425 579 aaKnown RBP eCLIP7.73□□□□□ -1.17
SF3A3-206ENST00000487062 NKRFO15226 690 aaKnown RBP eCLIP7.73□□□□□ -1.17
SF3A3-206ENST00000487062 CLIC2O15247 247 aa7.73□□□□□ -1.17
SF3A3-206ENST00000487062 ARHGAP6O43182 974 aa7.73□□□□□ -1.17
SF3A3-206ENST00000487062 GAS2O43903 313 aaKnown RBP7.73□□□□□ -1.17
SF3A3-206ENST00000487062 STX10O60499 249 aa7.73□□□□□ -1.17
SF3A3-206ENST00000487062 TLR2O60603 784 aa7.73□□□□□ -1.17
SF3A3-206ENST00000487062 MFAP3LO75121 409 aa7.73□□□□□ -1.17
SF3A3-206ENST00000487062 LGR5O75473 907 aa7.73□□□□□ -1.17
SF3A3-206ENST00000487062 ARIH2O95376 493 aa7.73□□□□□ -1.17
SF3A3-206ENST00000487062 TRIM21P19474 475 aaKnown RBP7.73□□□□□ -1.17
SF3A3-206ENST00000487062 CASP14P31944 242 aa7.73□□□□□ -1.17
SF3A3-206ENST00000487062 HOXD13P35453 343 aa7.73□□□□□ -1.17
SF3A3-206ENST00000487062 PSMC2P35998 433 aaKnown RBP7.73□□□□□ -1.17
SF3A3-206ENST00000487062 ADKP55263 362 aaKnown RBP7.73□□□□□ -1.17
SF3A3-206ENST00000487062 RBL2Q08999 1139 aa7.73□□□□□ -1.17
SF3A3-206ENST00000487062 IRF5Q13568 498 aa7.73□□□□□ -1.17
SF3A3-206ENST00000487062 HSP90AA2PQ14568 343 aaPredicted RBP7.73□□□□□ -1.17
SF3A3-206ENST00000487062 EMC2Q15006 297 aa7.73□□□□□ -1.17
SF3A3-206ENST00000487062 SYCP1Q15431 976 aa7.73□□□□□ -1.17
SF3A3-206ENST00000487062 PTPN21Q16825 1174 aa7.73□□□□□ -1.17
SF3A3-206ENST00000487062 ZC2HC1CQ53FD0 456 aaPredicted RBP7.73□□□□□ -1.17
SF3A3-206ENST00000487062 FIGNQ5HY92 759 aa7.73□□□□□ -1.17
SF3A3-206ENST00000487062 MIIPQ5JXC2 388 aa7.73□□□□□ -1.17
SF3A3-206ENST00000487062 CEP135Q66GS9 1140 aa7.73□□□□□ -1.17
SF3A3-206ENST00000487062 TAPT1Q6NXT6 567 aa7.73□□□□□ -1.17
SF3A3-206ENST00000487062 SLC9A9Q8IVB4 645 aa7.73□□□□□ -1.17
SF3A3-206ENST00000487062 TRIM59Q8IWR1 403 aa7.73□□□□□ -1.17
SF3A3-206ENST00000487062 TC2NQ8N9U0 490 aa7.73□□□□□ -1.17
SF3A3-206ENST00000487062 ZNF397Q8NF99 534 aaPredicted RBP7.73□□□□□ -1.17
SF3A3-206ENST00000487062 CPLX3Q8WVH0 158 aa7.73□□□□□ -1.17
SF3A3-206ENST00000487062 SLC7A3Q8WY07 619 aa7.73□□□□□ -1.17
SF3A3-206ENST00000487062 EEF2KMTQ96G04 330 aa7.73□□□□□ -1.17
SF3A3-206ENST00000487062 MAML3Q96JK9 1138 aa7.73□□□□□ -1.17
SF3A3-206ENST00000487062 GPR20Q99678 358 aa7.73□□□□□ -1.17
SF3A3-206ENST00000487062 BAG1Q99933 345 aaPredicted RBP7.73□□□□□ -1.17
SF3A3-206ENST00000487062 SH2D3AQ9BRG2 576 aa7.73□□□□□ -1.17
SF3A3-206ENST00000487062 NTPCRQ9BSD7 190 aaKnown RBP7.73□□□□□ -1.17
SF3A3-206ENST00000487062 TINF2Q9BSI4 451 aa7.73□□□□□ -1.17
SF3A3-206ENST00000487062 STRA6Q9BX79 667 aa7.73□□□□□ -1.17
SF3A3-206ENST00000487062 KMT5AQ9NQR1 393 aa7.73□□□□□ -1.17
SF3A3-206ENST00000487062 PDLIM7Q9NR12 457 aa7.73□□□□□ -1.17
SF3A3-206ENST00000487062 CAPN11Q9UMQ6 739 aa7.73□□□□□ -1.17
SF3A3-206ENST00000487062 FRMD4BQ9Y2L6 1034 aa7.73□□□□□ -1.17
SF3A3-206ENST00000487062 LUC7L2Q9Y383 392 aaKnown RBP7.73□□□□□ -1.17
SF3A3-206ENST00000487062 ZMYM2Q9UBW7 1377 aa7.72□□□□□ -1.17
SF3A3-206ENST00000487062 A0A1W2PQJ5 194 aa7.72□□□□□ -1.17
SF3A3-206ENST00000487062 SLC16A4O15374 487 aa7.72□□□□□ -1.17
SF3A3-206ENST00000487062 TGFB1I1O43294 461 aa7.72□□□□□ -1.17
SF3A3-206ENST00000487062 HBP1O60381 514 aa7.72□□□□□ -1.17
SF3A3-206ENST00000487062 MAFO75444 373 aaPredicted RBP7.72□□□□□ -1.17
SF3A3-206ENST00000487062 ALDH1A1P00352 501 aa7.72□□□□□ -1.17
SF3A3-206ENST00000487062 AFPP02771 609 aaKnown RBP7.72□□□□□ -1.17
SF3A3-206ENST00000487062 GYPCP04921 128 aa7.72□□□□□ -1.17
SF3A3-206ENST00000487062 XRCC5P13010 732 aaKnown RBP7.72□□□□□ -1.17
SF3A3-206ENST00000487062 KRT13P13646 458 aa7.72□□□□□ -1.17
SF3A3-206ENST00000487062 ATP4AP20648 1035 aa7.72□□□□□ -1.17
SF3A3-206ENST00000487062 NPTX2P47972 431 aa7.72□□□□□ -1.17
SF3A3-206ENST00000487062 TM4SF4P48230 202 aa7.72□□□□□ -1.17
SF3A3-206ENST00000487062 KCNA1Q09470 495 aa7.72□□□□□ -1.17
SF3A3-206ENST00000487062 HSDL1Q3SXM5 330 aa7.72□□□□□ -1.17
SF3A3-206ENST00000487062 DNTTIP2Q5QJE6 756 aaKnown RBP7.72□□□□□ -1.17
SF3A3-206ENST00000487062 MORN1Q5T089 497 aa7.72□□□□□ -1.17
SF3A3-206ENST00000487062 IER5Q5VY09 327 aa7.72□□□□□ -1.17
SF3A3-206ENST00000487062 IQSEC1Q6DN90 963 aa7.72□□□□□ -1.17
SF3A3-206ENST00000487062 C17orf99Q6UX52 265 aa7.72□□□□□ -1.17
SF3A3-206ENST00000487062 C12orf56Q8IXR9 622 aa7.72□□□□□ -1.17
SF3A3-206ENST00000487062 FAM186BQ8IYM0 893 aa7.72□□□□□ -1.17
SF3A3-206ENST00000487062 NEK11Q8NG66 645 aa7.72□□□□□ -1.17
SF3A3-206ENST00000487062 OR8K1Q8NGG5 319 aa7.72□□□□□ -1.17
SF3A3-206ENST00000487062 ATP8B4Q8TF62 1192 aa7.72□□□□□ -1.17
SF3A3-206ENST00000487062 TCP11Q8WWU5 503 aa7.72□□□□□ -1.17
SF3A3-206ENST00000487062 SOCS4Q8WXH5 440 aa7.72□□□□□ -1.17
SF3A3-206ENST00000487062 EMID1Q96A84 441 aaPredicted RBP7.72□□□□□ -1.17
SF3A3-206ENST00000487062 PCYT2Q99447 389 aa7.72□□□□□ -1.17
SF3A3-206ENST00000487062 PHOX2BQ99453 314 aa7.72□□□□□ -1.17
SF3A3-206ENST00000487062 EDEM3Q9BZQ6 932 aa7.72□□□□□ -1.17
SF3A3-206ENST00000487062 POLR3FQ9H1D9 316 aaPredicted RBP7.72□□□□□ -1.17
SF3A3-206ENST00000487062 TMX1Q9H3N1 280 aa7.72□□□□□ -1.17
SF3A3-206ENST00000487062 DHX33Q9H6R0 707 aaKnown RBP7.72□□□□□ -1.17
SF3A3-206ENST00000487062 GPRC5CQ9NQ84 441 aa7.72□□□□□ -1.17
SF3A3-206ENST00000487062 XPNPEP1Q9NQW7 623 aa7.72□□□□□ -1.17
SF3A3-206ENST00000487062 PDGFCQ9NRA1 345 aa7.72□□□□□ -1.17
SF3A3-206ENST00000487062 AGPAT3Q9NRZ7 376 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms