RNA–Protein interactions for RNA: ENST00000486845.1

PHF1-208, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,099 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-208ENST00000486845 CDC42EP1Q00587 391 aa22.6■■□□□ 1.21
PHF1-208ENST00000486845 TEKT3Q9BXF9 490 aa22.6■■□□□ 1.21
PHF1-208ENST00000486845 GCOM2Q9BZD3 368 aaPredicted RBP22.6■■□□□ 1.21
PHF1-208ENST00000486845 CHST12Q9NRB3 414 aa22.6■■□□□ 1.21
PHF1-208ENST00000486845 ZFHX2Q9C0A1 2572 aaPredicted RBP22.6■■□□□ 1.21
PHF1-208ENST00000486845 USP34Q70CQ2 3546 aa22.6■■□□□ 1.21
PHF1-208ENST00000486845 CHMP2AO43633 222 aa22.59■■□□□ 1.21
PHF1-208ENST00000486845 CXCL14O95715 111 aa22.59■■□□□ 1.21
PHF1-208ENST00000486845 UGCGQ16739 394 aa22.59■■□□□ 1.21
PHF1-208ENST00000486845 TMEM87AQ8NBN3 555 aa22.59■■□□□ 1.21
PHF1-208ENST00000486845 SLC5A5Q92911 643 aa22.59■■□□□ 1.21
PHF1-208ENST00000486845 CCDC136Q96JN2 1154 aa22.59■■□□□ 1.21
PHF1-208ENST00000486845 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.58■■□□□ 1.21
PHF1-208ENST00000486845 NT5C1B-RDH14C9J2C7 533 aa22.58■■□□□ 1.21
PHF1-208ENST00000486845 GALR2O43603 387 aaPredicted RBP22.58■■□□□ 1.21
PHF1-208ENST00000486845 BRD1O95696 1058 aa22.58■■□□□ 1.21
PHF1-208ENST00000486845 USP11P51784 963 aa22.58■■□□□ 1.21
PHF1-208ENST00000486845 POLGP54098 1239 aaPredicted RBP22.58■■□□□ 1.21
PHF1-208ENST00000486845 TARBP2Q15633 366 aaKnown RBP22.58■■□□□ 1.21
PHF1-208ENST00000486845 RARS2Q5T160 578 aaKnown RBP22.58■■□□□ 1.21
PHF1-208ENST00000486845 LRCH2Q5VUJ6 765 aa22.58■■□□□ 1.21
PHF1-208ENST00000486845 Q6ZUG5 572 aa22.58■■□□□ 1.21
PHF1-208ENST00000486845 VPS52Q8N1B4 723 aa22.58■■□□□ 1.21
PHF1-208ENST00000486845 TDRD5Q8NAT2 981 aaKnown RBP22.58■■□□□ 1.21
PHF1-208ENST00000486845 BRF1Q92994 677 aa22.58■■□□□ 1.21
PHF1-208ENST00000486845 PHKBQ93100 1093 aa22.58■■□□□ 1.21
PHF1-208ENST00000486845 TRAIPQ9BWF2 469 aa22.58■■□□□ 1.21
PHF1-208ENST00000486845 ZBP1Q9H171 429 aa22.58■■□□□ 1.21
PHF1-208ENST00000486845 UNC45AQ9H3U1 944 aa22.58■■□□□ 1.21
PHF1-208ENST00000486845 MYO10Q9HD67 2058 aa22.58■■□□□ 1.2
PHF1-208ENST00000486845 H0Y858 1186 aa22.57■■□□□ 1.2
PHF1-208ENST00000486845 ZC3H11AO75152 810 aaKnown RBP eCLIP22.57■■□□□ 1.21e-12■■■■□ 20.2
PHF1-208ENST00000486845 SKIP12755 728 aa22.57■■□□□ 1.2
PHF1-208ENST00000486845 CPA1P15085 419 aa22.57■■□□□ 1.2
PHF1-208ENST00000486845 SFPQP23246 707 aaKnown RBP eCLIP22.57■■□□□ 1.2
PHF1-208ENST00000486845 PHKA2P46019 1235 aa22.57■■□□□ 1.2
PHF1-208ENST00000486845 GIT2Q14161 759 aa22.57■■□□□ 1.2
PHF1-208ENST00000486845 KIAA1841Q6NSI8 718 aa22.57■■□□□ 1.2
PHF1-208ENST00000486845 RDM1Q8NG50 284 aa22.57■■□□□ 1.2
PHF1-208ENST00000486845 SNX27Q96L92 541 aa22.57■■□□□ 1.2
PHF1-208ENST00000486845 RNF26Q9BY78 433 aaPredicted RBP22.57■■□□□ 1.2
PHF1-208ENST00000486845 SEPT9Q9UHD8 586 aaPredicted RBP22.57■■□□□ 1.2
PHF1-208ENST00000486845 IRAK3Q9Y616 596 aa22.57■■□□□ 1.2
PHF1-208ENST00000486845 CDC45O75419 566 aa22.56■■□□□ 1.2
PHF1-208ENST00000486845 CSDE1O75534 798 aaKnown RBP22.56■■□□□ 1.2
PHF1-208ENST00000486845 DNM2P50570 870 aa22.56■■□□□ 1.2
PHF1-208ENST00000486845 DRP2Q13474 957 aa22.56■■□□□ 1.2
PHF1-208ENST00000486845 XKR3Q5GH77 459 aa22.56■■□□□ 1.2
PHF1-208ENST00000486845 ATAT1Q5SQI0 421 aa22.56■■□□□ 1.2
PHF1-208ENST00000486845 TWF2Q6IBS0 349 aaKnown RBP22.56■■□□□ 1.2
PHF1-208ENST00000486845 GLB1LQ6UWU2 654 aa22.56■■□□□ 1.2
PHF1-208ENST00000486845 ZDHHC14Q8IZN3 488 aa22.56■■□□□ 1.2
PHF1-208ENST00000486845 NIFKQ9BYG3 293 aaKnown RBP22.56■■□□□ 1.2
PHF1-208ENST00000486845 INO80BQ9C086 356 aaPredicted RBP22.56■■□□□ 1.2
PHF1-208ENST00000486845 USTQ9Y2C2 406 aa22.56■■□□□ 1.2
PHF1-208ENST00000486845 WEE2P0C1S8 567 aa22.55■■□□□ 1.2
PHF1-208ENST00000486845 CTSAP10619 480 aa22.55■■□□□ 1.2
PHF1-208ENST00000486845 MTERF2Q49AM1 385 aa22.55■■□□□ 1.2
PHF1-208ENST00000486845 BLOC1S2Q6QNY1 142 aa22.55■■□□□ 1.2
PHF1-208ENST00000486845 MIER3Q7Z3K6 550 aa22.55■■□□□ 1.2
PHF1-208ENST00000486845 DDX53Q86TM3 631 aaKnown RBP22.55■■□□□ 1.2
PHF1-208ENST00000486845 ZNF410Q86VK4 478 aa22.55■■□□□ 1.2
PHF1-208ENST00000486845 PLCD3Q8N3E9 789 aa22.55■■□□□ 1.2
PHF1-208ENST00000486845 C12orf76Q8N812 135 aaPredicted RBP22.55■■□□□ 1.2
PHF1-208ENST00000486845 IGSF21Q96ID5 467 aa22.55■■□□□ 1.2
PHF1-208ENST00000486845 JAKMIP1Q96N16 626 aaKnown RBP22.55■■□□□ 1.2
PHF1-208ENST00000486845 VPS54Q9P1Q0 977 aa22.55■■□□□ 1.2
PHF1-208ENST00000486845 DBR1Q9UK59 544 aaKnown RBP22.55■■□□□ 1.2
PHF1-208ENST00000486845 PLXNA3P51805 1871 aa22.54■■□□□ 1.2
PHF1-208ENST00000486845 A0A087WZ62 844 aa22.54■■□□□ 1.2
PHF1-208ENST00000486845 IGKV6-21A0A0C4DH24 114 aa22.54■■□□□ 1.2
PHF1-208ENST00000486845 EDIL3O43854 480 aa22.54■■□□□ 1.2
PHF1-208ENST00000486845 PSMD10O75832 226 aa22.54■■□□□ 1.2
PHF1-208ENST00000486845 EPCAMP16422 314 aa22.54■■□□□ 1.2
PHF1-208ENST00000486845 RAB27AP51159 221 aa22.54■■□□□ 1.2
PHF1-208ENST00000486845 NOMO2Q5JPE7 1267 aa22.54■■□□□ 1.2
PHF1-208ENST00000486845 TMEM173Q86WV6 379 aaPredicted RBP22.54■■□□□ 1.2
PHF1-208ENST00000486845 AUTS2Q8WXX7 1259 aa22.54■■□□□ 1.2
PHF1-208ENST00000486845 KCNB2Q92953 911 aa22.54■■□□□ 1.2
PHF1-208ENST00000486845 FDXACB1Q9BRP7 624 aaPredicted RBP22.54■■□□□ 1.2
PHF1-208ENST00000486845 SLC26A6Q9BXS9 759 aa22.54■■□□□ 1.2
PHF1-208ENST00000486845 C22orf23Q9BZE7 217 aa22.54■■□□□ 1.2
PHF1-208ENST00000486845 PIN4Q9Y237 131 aaKnown RBP22.54■■□□□ 1.2
PHF1-208ENST00000486845 PROB1E7EW31 1015 aa22.53■■□□□ 1.2
PHF1-208ENST00000486845 ASGR2P07307 311 aa22.53■■□□□ 1.2
PHF1-208ENST00000486845 IFNAR1P17181 557 aa22.53■■□□□ 1.2
PHF1-208ENST00000486845 NLRP5P59047 1200 aa22.53■■□□□ 1.2
PHF1-208ENST00000486845 RNASELQ05823 741 aaKnown RBP22.53■■□□□ 1.2
PHF1-208ENST00000486845 NTRK3Q16288 839 aa22.53■■□□□ 1.2
PHF1-208ENST00000486845 Q4G0T1 1027 aa22.53■■□□□ 1.2
PHF1-208ENST00000486845 PPFIBP1Q86W92 1011 aa22.53■■□□□ 1.2
PHF1-208ENST00000486845 FBXL16Q8N461 479 aa22.53■■□□□ 1.2
PHF1-208ENST00000486845 TMEM105Q8N8V8 129 aa22.53■■□□□ 1.2
PHF1-208ENST00000486845 SLC22A17Q8WUG5 538 aa22.53■■□□□ 1.2
PHF1-208ENST00000486845 LPPQ93052 612 aa22.53■■□□□ 1.2
PHF1-208ENST00000486845 CEP89Q96ST8 783 aa22.53■■□□□ 1.2
PHF1-208ENST00000486845 MFSD1Q9H3U5 465 aa22.53■■□□□ 1.2
PHF1-208ENST00000486845 NRDE2Q9H7Z3 1164 aa22.53■■□□□ 1.2
PHF1-208ENST00000486845 SH3GLB2Q9NR46 395 aa22.53■■□□□ 1.2
PHF1-208ENST00000486845 TBC1D13Q9NVG8 400 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms