RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 RIN2Q8WYP3 895 aaPredicted RBP19.57■□□□□ 0.72
PDLIM7-207ENST00000486828 GPR88Q9GZN0 384 aa19.57■□□□□ 0.72
PDLIM7-207ENST00000486828 TMEM206Q9H813 350 aa19.57■□□□□ 0.72
PDLIM7-207ENST00000486828 SLC38A10Q9HBR0 1119 aa19.57■□□□□ 0.72
PDLIM7-207ENST00000486828 MAP3K20Q9NYL2 800 aaKnown RBP19.57■□□□□ 0.72
PDLIM7-207ENST00000486828 APEX2Q9UBZ4 518 aa19.57■□□□□ 0.72
PDLIM7-207ENST00000486828 TMEM59LQ9UK28 342 aa19.57■□□□□ 0.72
PDLIM7-207ENST00000486828 HEXIM1O94992 359 aaKnown RBP19.56■□□□□ 0.72
PDLIM7-207ENST00000486828 LYPLA2O95372 231 aa19.56■□□□□ 0.72
PDLIM7-207ENST00000486828 GLI1P08151 1106 aa19.56■□□□□ 0.72
PDLIM7-207ENST00000486828 CAPN2P17655 700 aa19.56■□□□□ 0.72
PDLIM7-207ENST00000486828 LMNB1P20700 586 aa19.56■□□□□ 0.72
PDLIM7-207ENST00000486828 ACTN2P35609 894 aa19.56■□□□□ 0.72
PDLIM7-207ENST00000486828 RARRES1P49788 294 aa19.56■□□□□ 0.72
PDLIM7-207ENST00000486828 TNNC1P63316 161 aa19.56■□□□□ 0.72
PDLIM7-207ENST00000486828 MRPS9P82933 396 aaKnown RBP19.56■□□□□ 0.72
PDLIM7-207ENST00000486828 GPR162Q16538 588 aa19.56■□□□□ 0.72
PDLIM7-207ENST00000486828 MUM1L1Q5H9M0 696 aa19.56■□□□□ 0.72
PDLIM7-207ENST00000486828 CPXCR1Q8N123 301 aa19.56■□□□□ 0.72
PDLIM7-207ENST00000486828 SYTL5Q8TDW5 730 aaPredicted RBP19.56■□□□□ 0.72
PDLIM7-207ENST00000486828 KRT12Q99456 494 aa19.56■□□□□ 0.72
PDLIM7-207ENST00000486828 RAVER2Q9HCJ3 691 aaKnown RBP19.56■□□□□ 0.72
PDLIM7-207ENST00000486828 CCDC172P0C7W6 258 aa19.55■□□□□ 0.72
PDLIM7-207ENST00000486828 QARSP47897 775 aaKnown RBP19.55■□□□□ 0.72
PDLIM7-207ENST00000486828 MTMR1Q13613 665 aa19.55■□□□□ 0.72
PDLIM7-207ENST00000486828 PLS1Q14651 629 aa19.55■□□□□ 0.72
PDLIM7-207ENST00000486828 CIAPIN1Q6FI81 312 aa19.55■□□□□ 0.72
PDLIM7-207ENST00000486828 ACTRT1Q8TDG2 376 aa19.55■□□□□ 0.72
PDLIM7-207ENST00000486828 SYT11Q9BT88 431 aa19.55■□□□□ 0.72
PDLIM7-207ENST00000486828 GOLPH3Q9H4A6 298 aa19.55■□□□□ 0.72
PDLIM7-207ENST00000486828 ZBTB48P10074 688 aaPredicted RBP19.55■□□□□ 0.72
PDLIM7-207ENST00000486828 KRT13P13646 458 aa19.55■□□□□ 0.72
PDLIM7-207ENST00000486828 RFX1P22670 979 aa19.55■□□□□ 0.72
PDLIM7-207ENST00000486828 ZSCAN26Q16670 478 aa19.55■□□□□ 0.72
PDLIM7-207ENST00000486828 MAEAQ7L5Y9 396 aa19.55■□□□□ 0.72
PDLIM7-207ENST00000486828 C12orf56Q8IXR9 622 aa19.55■□□□□ 0.72
PDLIM7-207ENST00000486828 SYCE1Q8N0S2 351 aa19.55■□□□□ 0.72
PDLIM7-207ENST00000486828 TEPSINQ96N21 525 aa19.55■□□□□ 0.72
PDLIM7-207ENST00000486828 ACCSQ96QU6 501 aa19.55■□□□□ 0.72
PDLIM7-207ENST00000486828 EPB41L5Q9HCM4 733 aa19.55■□□□□ 0.72
PDLIM7-207ENST00000486828 TBC1D22BQ9NU19 505 aa19.55■□□□□ 0.72
PDLIM7-207ENST00000486828 GINM1Q9NU53 330 aa19.55■□□□□ 0.72
PDLIM7-207ENST00000486828 STXBP5LQ9Y2K9 1186 aa19.55■□□□□ 0.72
PDLIM7-207ENST00000486828 PLS3P13797 630 aa19.54■□□□□ 0.72
PDLIM7-207ENST00000486828 GALCP54803 685 aa19.54■□□□□ 0.72
PDLIM7-207ENST00000486828 RNASE9P60153 205 aaKnown RBP19.54■□□□□ 0.72
PDLIM7-207ENST00000486828 GUCY2DQ02846 1103 aa19.54■□□□□ 0.72
PDLIM7-207ENST00000486828 PAK2Q13177 524 aa19.54■□□□□ 0.72
PDLIM7-207ENST00000486828 INTS8Q75QN2 995 aaKnown RBP19.54■□□□□ 0.72
PDLIM7-207ENST00000486828 GLYCTKQ8IVS8 523 aa19.54■□□□□ 0.72
PDLIM7-207ENST00000486828 SUCLA2Q9P2R7 463 aaPredicted RBP19.54■□□□□ 0.72
PDLIM7-207ENST00000486828 SAMM50Q9Y512 469 aa19.54■□□□□ 0.72
PDLIM7-207ENST00000486828 NCANO14594 1321 aa19.53■□□□□ 0.72
PDLIM7-207ENST00000486828 CLSTN1O94985 981 aa19.53■□□□□ 0.72
PDLIM7-207ENST00000486828 TMEM253P0C7T8 217 aa19.53■□□□□ 0.72
PDLIM7-207ENST00000486828 CARSP49589 748 aaKnown RBP19.53■□□□□ 0.72
PDLIM7-207ENST00000486828 ALS2CLQ60I27 953 aa19.53■□□□□ 0.72
PDLIM7-207ENST00000486828 LEKR1Q6ZMV7 388 aa19.53■□□□□ 0.72
PDLIM7-207ENST00000486828 PEX26Q7Z412 305 aa19.53■□□□□ 0.72
PDLIM7-207ENST00000486828 RDH13Q8NBN7 331 aa19.53■□□□□ 0.72
PDLIM7-207ENST00000486828 TSEN2Q8NCE0 465 aaKnown RBP19.53■□□□□ 0.72
PDLIM7-207ENST00000486828 LMO3Q8TAP4 145 aa19.53■□□□□ 0.72
PDLIM7-207ENST00000486828 SCFD2Q8WU76 684 aa19.53■□□□□ 0.72
PDLIM7-207ENST00000486828 TAAR1Q96RJ0 339 aa19.53■□□□□ 0.72
PDLIM7-207ENST00000486828 SH3GL2Q99962 352 aa19.53■□□□□ 0.72
PDLIM7-207ENST00000486828 HOMER2Q9NSB8 354 aa19.53■□□□□ 0.72
PDLIM7-207ENST00000486828 SCAF8Q9UPN6 1271 aaKnown RBP19.53■□□□□ 0.72
PDLIM7-207ENST00000486828 CEP104O60308 925 aa19.53■□□□□ 0.72
PDLIM7-207ENST00000486828 RPS6KA5O75582 802 aa19.53■□□□□ 0.72
PDLIM7-207ENST00000486828 YWHABP31946 246 aaKnown RBP19.53■□□□□ 0.72
PDLIM7-207ENST00000486828 TNFAIP1Q13829 316 aa19.53■□□□□ 0.72
PDLIM7-207ENST00000486828 PGM5Q15124 567 aa19.53■□□□□ 0.72
PDLIM7-207ENST00000486828 PHLDB3Q6NSJ2 640 aa19.53■□□□□ 0.72
PDLIM7-207ENST00000486828 METTL13Q8N6R0 699 aa19.53■□□□□ 0.72
PDLIM7-207ENST00000486828 CALR3Q96L12 384 aaKnown RBP19.53■□□□□ 0.72
PDLIM7-207ENST00000486828 TIPINQ9BVW5 301 aa19.53■□□□□ 0.72
PDLIM7-207ENST00000486828 ST6GALNAC4Q9H4F1 302 aa19.53■□□□□ 0.72
PDLIM7-207ENST00000486828 PPP1R9AQ9ULJ8 1098 aa19.53■□□□□ 0.72
PDLIM7-207ENST00000486828 ZSCAN5CA6NGD5 496 aaPredicted RBP19.52■□□□□ 0.72
PDLIM7-207ENST00000486828 CTNND1O60716 968 aaKnown RBP19.52■□□□□ 0.72
PDLIM7-207ENST00000486828 EIF2AK2P19525 551 aaKnown RBP19.52■□□□□ 0.72
PDLIM7-207ENST00000486828 RPS6P62753 249 aaKnown RBP19.52■□□□□ 0.72
PDLIM7-207ENST00000486828 SPP2Q13103 211 aa19.52■□□□□ 0.72
PDLIM7-207ENST00000486828 DGKZQ13574 1117 aa19.52■□□□□ 0.72
PDLIM7-207ENST00000486828 KIF22Q14807 665 aa19.52■□□□□ 0.72
PDLIM7-207ENST00000486828 C4orf19Q8IY42 314 aa19.52■□□□□ 0.72
PDLIM7-207ENST00000486828 PCIF1Q9H4Z3 704 aa19.52■□□□□ 0.72
PDLIM7-207ENST00000486828 PNMA2Q9UL42 364 aa19.52■□□□□ 0.72
PDLIM7-207ENST00000486828 NFU1Q9UMS0 254 aa19.52■□□□□ 0.72
PDLIM7-207ENST00000486828 ASTN2O75129 1339 aaPredicted RBP19.52■□□□□ 0.71
PDLIM7-207ENST00000486828 EMSYQ7Z589 1322 aa19.52■□□□□ 0.71
PDLIM7-207ENST00000486828 TMCO5BA8MYB1 307 aa19.51■□□□□ 0.71
PDLIM7-207ENST00000486828 PGRMC1O00264 195 aaKnown RBP19.51■□□□□ 0.71
PDLIM7-207ENST00000486828 P4HA2O15460 535 aa19.51■□□□□ 0.71
PDLIM7-207ENST00000486828 RAD51CO43502 376 aa19.51■□□□□ 0.71
PDLIM7-207ENST00000486828 OPA1O60313 960 aa19.51■□□□□ 0.71
PDLIM7-207ENST00000486828 VAMP7P51809 220 aa19.51■□□□□ 0.71
PDLIM7-207ENST00000486828 DLG4P78352 724 aa19.51■□□□□ 0.71
PDLIM7-207ENST00000486828 GTF2BQ00403 316 aa19.51■□□□□ 0.71
PDLIM7-207ENST00000486828 DAAM2Q86T65 1068 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms