RNA–Protein interactions for RNA: ENST00000486793.5

GMDS-205, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 3

Gene GMDS, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-205ENST00000486793 SEPT9Q9UHD8 586 aaPredicted RBP21.12■□□□□ 0.97
GMDS-205ENST00000486793 CDH22Q9UJ99 828 aa21.12■□□□□ 0.97
GMDS-205ENST00000486793 PCDHA4Q9UN74 947 aa21.12■□□□□ 0.97
GMDS-205ENST00000486793 IGKV6-21A0A0C4DH24 114 aa21.11■□□□□ 0.97
GMDS-205ENST00000486793 C2orf71A6NGG8 1288 aa21.11■□□□□ 0.97
GMDS-205ENST00000486793 TDP2O95551 362 aa21.11■□□□□ 0.97
GMDS-205ENST00000486793 CXCL14O95715 111 aa21.11■□□□□ 0.97
GMDS-205ENST00000486793 SP100P23497 879 aaPredicted RBP21.11■□□□□ 0.97
GMDS-205ENST00000486793 DNM2P50570 870 aa21.11■□□□□ 0.97
GMDS-205ENST00000486793 BCAR1P56945 870 aa21.11■□□□□ 0.97
GMDS-205ENST00000486793 CDC42EP1Q00587 391 aa21.11■□□□□ 0.97
GMDS-205ENST00000486793 SMC1AQ14683 1233 aaKnown RBP21.11■□□□□ 0.97
GMDS-205ENST00000486793 PTPN21Q16825 1174 aa21.11■□□□□ 0.97
GMDS-205ENST00000486793 B3GNT9Q6UX72 402 aa21.11■□□□□ 0.97
GMDS-205ENST00000486793 CASP10Q92851 521 aa21.11■□□□□ 0.97
GMDS-205ENST00000486793 PHOX2BQ99453 314 aa21.11■□□□□ 0.97
GMDS-205ENST00000486793 HCFC2Q9Y5Z7 792 aa21.11■□□□□ 0.97
GMDS-205ENST00000486793 KIAA1671Q9BY89 1806 aa21.11■□□□□ 0.97
GMDS-205ENST00000486793 A0A087WZ62 844 aa21.1■□□□□ 0.97
GMDS-205ENST00000486793 DDX11L8A8MPP1 907 aa21.1■□□□□ 0.97
GMDS-205ENST00000486793 CLASP2O75122 1294 aaKnown RBP21.1■□□□□ 0.97
GMDS-205ENST00000486793 SSRP1Q08945 709 aaKnown RBP21.1■□□□□ 0.97
GMDS-205ENST00000486793 LONRF3Q496Y0 759 aa21.1■□□□□ 0.97
GMDS-205ENST00000486793 TRIM22Q8IYM9 498 aa21.1■□□□□ 0.97
GMDS-205ENST00000486793 ASIC4Q96FT7 647 aa21.1■□□□□ 0.97
GMDS-205ENST00000486793 FDXACB1Q9BRP7 624 aaPredicted RBP21.1■□□□□ 0.97
GMDS-205ENST00000486793 MRPL9Q9BYD2 267 aaKnown RBP21.1■□□□□ 0.97
GMDS-205ENST00000486793 C22orf23Q9BZE7 217 aa21.1■□□□□ 0.97
GMDS-205ENST00000486793 SUCLA2Q9P2R7 463 aaPredicted RBP21.1■□□□□ 0.97
GMDS-205ENST00000486793 ZNF318Q5VUA4 2279 aa21.09■□□□□ 0.97
GMDS-205ENST00000486793 PHKA2P46019 1235 aa21.09■□□□□ 0.97
GMDS-205ENST00000486793 PTPN5P54829 565 aa21.09■□□□□ 0.97
GMDS-205ENST00000486793 TOB2Q14106 344 aaPredicted RBP21.09■□□□□ 0.97
GMDS-205ENST00000486793 TPRNQ4KMQ1 711 aa21.09■□□□□ 0.97
GMDS-205ENST00000486793 RUFY3Q7L099 469 aa21.09■□□□□ 0.97
GMDS-205ENST00000486793 BLIDQ8IZY5 108 aa21.09■□□□□ 0.97
GMDS-205ENST00000486793 LPPQ93052 612 aa21.09■□□□□ 0.97
GMDS-205ENST00000486793 ADAM7Q9H2U9 754 aa21.09■□□□□ 0.97
GMDS-205ENST00000486793 TSHZ2Q9NRE2 1034 aa21.09■□□□□ 0.97
GMDS-205ENST00000486793 PLXNA4Q9HCM2 1894 aa21.09■□□□□ 0.97
GMDS-205ENST00000486793 LOXHD1Q8IVV2 1947 aa21.08■□□□□ 0.97
GMDS-205ENST00000486793 M0R2N6 131 aa21.08■□□□□ 0.97
GMDS-205ENST00000486793 MAFO75444 373 aaPredicted RBP21.08■□□□□ 0.97
GMDS-205ENST00000486793 CA8P35219 290 aa21.08■□□□□ 0.97
GMDS-205ENST00000486793 TWF2Q6IBS0 349 aaKnown RBP21.08■□□□□ 0.97
GMDS-205ENST00000486793 CES5AQ6NT32 575 aa21.08■□□□□ 0.97
GMDS-205ENST00000486793 RHPN2Q8IUC4 686 aa21.08■□□□□ 0.97
GMDS-205ENST00000486793 KSR1Q8IVT5 923 aa21.08■□□□□ 0.97
GMDS-205ENST00000486793 ETNPPLQ8TBG4 499 aa21.08■□□□□ 0.97
GMDS-205ENST00000486793 TMEM169Q96HH4 297 aa21.08■□□□□ 0.97
GMDS-205ENST00000486793 MBOAT7Q96N66 472 aa21.08■□□□□ 0.97
GMDS-205ENST00000486793 PRRX2Q99811 253 aa21.08■□□□□ 0.97
GMDS-205ENST00000486793 LARP6Q9BRS8 491 aaKnown RBP21.08■□□□□ 0.97
GMDS-205ENST00000486793 TRAIPQ9BWF2 469 aa21.08■□□□□ 0.97
GMDS-205ENST00000486793 ZSWIM6Q9HCJ5 1215 aa21.08■□□□□ 0.97
GMDS-205ENST00000486793 ZDBF2Q9HCK1 2354 aa21.08■□□□□ 0.96
GMDS-205ENST00000486793 FNDC1Q4ZHG4 1894 aaPredicted RBP21.07■□□□□ 0.96
GMDS-205ENST00000486793 REC8O95072 547 aa21.07■□□□□ 0.96
GMDS-205ENST00000486793 SFPQP23246 707 aaKnown RBP eCLIP21.07■□□□□ 0.96
GMDS-205ENST00000486793 VCPP55072 806 aaKnown RBP21.07■□□□□ 0.96
GMDS-205ENST00000486793 ITIH3Q06033 890 aa21.07■□□□□ 0.96
GMDS-205ENST00000486793 TCF15Q12870 199 aa21.07■□□□□ 0.96
GMDS-205ENST00000486793 BMS1Q14692 1282 aaKnown RBP21.07■□□□□ 0.96
GMDS-205ENST00000486793 ANO5Q75V66 913 aa21.07■□□□□ 0.96
GMDS-205ENST00000486793 ZBTB33Q86T24 672 aa21.07■□□□□ 0.96
GMDS-205ENST00000486793 TMEM173Q86WV6 379 aaPredicted RBP21.07■□□□□ 0.96
GMDS-205ENST00000486793 VPS52Q8N1B4 723 aa21.07■□□□□ 0.96
GMDS-205ENST00000486793 AUTS2Q8WXX7 1259 aa21.07■□□□□ 0.96
GMDS-205ENST00000486793 INO80BQ9C086 356 aaPredicted RBP21.07■□□□□ 0.96
GMDS-205ENST00000486793 POMKQ9H5K3 350 aa21.07■□□□□ 0.96
GMDS-205ENST00000486793 PIN4Q9Y237 131 aaKnown RBP21.07■□□□□ 0.96
GMDS-205ENST00000486793 NR2E1Q9Y466 385 aa21.07■□□□□ 0.96
GMDS-205ENST00000486793 EVPLQ92817 2033 aa21.06■□□□□ 0.96
GMDS-205ENST00000486793 MEIS3P2A8K0S8 358 aa21.06■□□□□ 0.96
GMDS-205ENST00000486793 CPLX1O14810 134 aa21.06■□□□□ 0.96
GMDS-205ENST00000486793 ZC3H11AO75152 810 aaKnown RBP eCLIP21.06■□□□□ 0.96
GMDS-205ENST00000486793 DEXIO95424 95 aa21.06■□□□□ 0.96
GMDS-205ENST00000486793 WEE2P0C1S8 567 aa21.06■□□□□ 0.96
GMDS-205ENST00000486793 AVPR2P30518 371 aa21.06■□□□□ 0.96
GMDS-205ENST00000486793 NPY5RQ15761 445 aa21.06■□□□□ 0.96
GMDS-205ENST00000486793 GLB1LQ6UWU2 654 aa21.06■□□□□ 0.96
GMDS-205ENST00000486793 ZNF410Q86VK4 478 aa21.06■□□□□ 0.96
GMDS-205ENST00000486793 C12orf76Q8N812 135 aaPredicted RBP21.06■□□□□ 0.96
GMDS-205ENST00000486793 KREMEN2Q8NCW0 462 aa21.06■□□□□ 0.96
GMDS-205ENST00000486793 ZNF274Q96GC6 653 aaPredicted RBP21.06■□□□□ 0.96
GMDS-205ENST00000486793 AIFM3Q96NN9 605 aa21.06■□□□□ 0.96
GMDS-205ENST00000486793 DDX25Q9UHL0 483 aaKnown RBP21.06■□□□□ 0.96
GMDS-205ENST00000486793 C2CD4DB7Z1M9 353 aa21.05■□□□□ 0.96
GMDS-205ENST00000486793 ZNF623O75123 536 aa21.05■□□□□ 0.96
GMDS-205ENST00000486793 OFD1O75665 1012 aa21.05■□□□□ 0.96
GMDS-205ENST00000486793 GALTP07902 379 aa21.05■□□□□ 0.96
GMDS-205ENST00000486793 SKIP12755 728 aa21.05■□□□□ 0.96
GMDS-205ENST00000486793 PSMC5P62195 406 aa21.05■□□□□ 0.96
GMDS-205ENST00000486793 NOMO2Q5JPE7 1267 aa21.05■□□□□ 0.96
GMDS-205ENST00000486793 KANK3Q6NY19 840 aa21.05■□□□□ 0.96
GMDS-205ENST00000486793 MOXD1Q6UVY6 613 aa21.05■□□□□ 0.96
GMDS-205ENST00000486793 CATSPER4Q7RTX7 472 aa21.05■□□□□ 0.96
GMDS-205ENST00000486793 TMEM87AQ8NBN3 555 aa21.05■□□□□ 0.96
GMDS-205ENST00000486793 DAGLBQ8NCG7 672 aa21.05■□□□□ 0.96
GMDS-205ENST00000486793 IGSF21Q96ID5 467 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms