RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 ALS2Q96Q42 1657 aa14.29□□□□□ -0.12
HMGN1-216ENST00000486741 DHX9Q08211 1270 aaKnown RBP14.29□□□□□ -0.12
HMGN1-216ENST00000486741 PPP2R5AQ15172 486 aa14.29□□□□□ -0.12
HMGN1-216ENST00000486741 SCYL2Q6P3W7 929 aa14.29□□□□□ -0.12
HMGN1-216ENST00000486741 LPAR1Q92633 364 aa14.29□□□□□ -0.12
HMGN1-216ENST00000486741 HSPBP1Q9NZL4 362 aa14.29□□□□□ -0.12
HMGN1-216ENST00000486741 TRPM3Q9HCF6 1732 aaPredicted RBP14.28□□□□□ -0.12
HMGN1-216ENST00000486741 PITPNM2Q9BZ72 1349 aa14.28□□□□□ -0.12
HMGN1-216ENST00000486741 ATP8B1O43520 1251 aa14.28□□□□□ -0.12
HMGN1-216ENST00000486741 GGCXP38435 758 aa14.28□□□□□ -0.12
HMGN1-216ENST00000486741 SLCO1A2P46721 670 aa14.28□□□□□ -0.12
HMGN1-216ENST00000486741 GALCP54803 685 aa14.28□□□□□ -0.12
HMGN1-216ENST00000486741 DENND2CQ68D51 928 aa14.28□□□□□ -0.12
HMGN1-216ENST00000486741 GIMAP7Q8NHV1 300 aa14.28□□□□□ -0.12
HMGN1-216ENST00000486741 SLC30A5Q8TAD4 765 aa14.28□□□□□ -0.12
HMGN1-216ENST00000486741 IKZF4Q9H2S9 585 aa14.28□□□□□ -0.12
HMGN1-216ENST00000486741 ATP6V0A4Q9HBG4 840 aa14.28□□□□□ -0.12
HMGN1-216ENST00000486741 BCL9LQ86UU0 1499 aa14.28□□□□□ -0.12
HMGN1-216ENST00000486741 ATP2A1O14983 1001 aa14.28□□□□□ -0.12
HMGN1-216ENST00000486741 SOX5P35711 763 aa14.28□□□□□ -0.12
HMGN1-216ENST00000486741 MNAT1P51948 309 aa14.28□□□□□ -0.12
HMGN1-216ENST00000486741 RUFY4Q6ZNE9 571 aa14.28□□□□□ -0.12
HMGN1-216ENST00000486741 IRF2BP1Q8IU81 584 aa14.28□□□□□ -0.12
HMGN1-216ENST00000486741 AGBL3Q8NEM8 1001 aa14.28□□□□□ -0.12
HMGN1-216ENST00000486741 HEMGNQ9BXL5 484 aa14.28□□□□□ -0.12
HMGN1-216ENST00000486741 JPH1Q9HDC5 661 aaPredicted RBP14.28□□□□□ -0.12
HMGN1-216ENST00000486741 H0YCG3 227 aa14.28□□□□□ -0.12
HMGN1-216ENST00000486741 TNNC2P02585 160 aa14.28□□□□□ -0.12
HMGN1-216ENST00000486741 KCTD19Q17RG1 926 aaPredicted RBP14.28□□□□□ -0.12
HMGN1-216ENST00000486741 GMCL1P1Q8NEA9 526 aa14.28□□□□□ -0.12
HMGN1-216ENST00000486741 PI4K2AQ9BTU6 479 aa14.28□□□□□ -0.12
HMGN1-216ENST00000486741 TEX13BQ9BXU2 312 aa14.28□□□□□ -0.12
HMGN1-216ENST00000486741 SLC9A2Q9UBY0 812 aa14.28□□□□□ -0.12
HMGN1-216ENST00000486741 SNX24Q9Y343 169 aa14.28□□□□□ -0.12
HMGN1-216ENST00000486741 MYH2Q9UKX2 1941 aa14.28□□□□□ -0.12
HMGN1-216ENST00000486741 GAS8O95995 478 aa14.27□□□□□ -0.12
HMGN1-216ENST00000486741 IREB2P48200 963 aaKnown RBP14.27□□□□□ -0.12
HMGN1-216ENST00000486741 KLHDC7AQ5VTJ3 777 aa14.27□□□□□ -0.12
HMGN1-216ENST00000486741 TMEM270Q6UE05 265 aa14.27□□□□□ -0.12
HMGN1-216ENST00000486741 RNF10Q8N5U6 811 aaKnown RBP14.27□□□□□ -0.12
HMGN1-216ENST00000486741 RNF169Q8NCN4 708 aa14.27□□□□□ -0.12
HMGN1-216ENST00000486741 MSANTD4Q8NCY6 345 aa14.27□□□□□ -0.12
HMGN1-216ENST00000486741 MCPH1Q8NEM0 835 aa14.27□□□□□ -0.12
HMGN1-216ENST00000486741 CBWD1Q9BRT8 395 aa14.27□□□□□ -0.12
HMGN1-216ENST00000486741 LRRC10BA6NIK2 292 aa14.27□□□□□ -0.12
HMGN1-216ENST00000486741 BFSP1Q12934 665 aa14.27□□□□□ -0.12
HMGN1-216ENST00000486741 TKFCQ3LXA3 575 aa14.27□□□□□ -0.12
HMGN1-216ENST00000486741 ANKRD42Q8N9B4 389 aa14.27□□□□□ -0.12
HMGN1-216ENST00000486741 CAPS2Q9BXY5 557 aa14.27□□□□□ -0.12
HMGN1-216ENST00000486741 ZNF302Q9NR11 478 aa14.27□□□□□ -0.12
HMGN1-216ENST00000486741 RBM12Q9NTZ6 932 aaKnown RBP14.27□□□□□ -0.12
HMGN1-216ENST00000486741 CNOT8Q9UFF9 292 aaKnown RBP14.27□□□□□ -0.12
HMGN1-216ENST00000486741 AMACRQ9UHK6 382 aa14.27□□□□□ -0.12
HMGN1-216ENST00000486741 KCNG1Q9UIX4 513 aa14.27□□□□□ -0.12
HMGN1-216ENST00000486741 CLDN3O15551 220 aa14.27□□□□□ -0.13
HMGN1-216ENST00000486741 ATMINO43313 823 aaPredicted RBP14.27□□□□□ -0.13
HMGN1-216ENST00000486741 TBC1D8O95759 1140 aa14.27□□□□□ -0.13
HMGN1-216ENST00000486741 ICAM1P05362 532 aa14.27□□□□□ -0.13
HMGN1-216ENST00000486741 YARSP54577 528 aaKnown RBP14.27□□□□□ -0.13
HMGN1-216ENST00000486741 SEZ6Q53EL9 994 aa14.27□□□□□ -0.13
HMGN1-216ENST00000486741 FGFBP2Q9BYJ0 223 aa14.27□□□□□ -0.13
HMGN1-216ENST00000486741 AGPAT3Q9NRZ7 376 aa14.27□□□□□ -0.13
HMGN1-216ENST00000486741 ANAPC7Q9UJX3 599 aa14.27□□□□□ -0.13
HMGN1-216ENST00000486741 ZNF148Q9UQR1 794 aa14.27□□□□□ -0.13
HMGN1-216ENST00000486741 COL14A1Q05707 1796 aaKnown RBP14.27□□□□□ -0.13
HMGN1-216ENST00000486741 DYNLT1P63172 113 aa14.27□□□□□ -0.13
HMGN1-216ENST00000486741 C10orf76Q5T2E6 689 aa14.27□□□□□ -0.13
HMGN1-216ENST00000486741 CDR2LQ86X02 465 aaPredicted RBP14.27□□□□□ -0.13
HMGN1-216ENST00000486741 NEK9Q8TD19 979 aa14.27□□□□□ -0.13
HMGN1-216ENST00000486741 PBKQ96KB5 322 aa14.27□□□□□ -0.13
HMGN1-216ENST00000486741 C11orf70Q9BRQ4 267 aa14.27□□□□□ -0.13
HMGN1-216ENST00000486741 POLR3CQ9BUI4 534 aaPredicted RBP14.27□□□□□ -0.13
HMGN1-216ENST00000486741 EDEM3Q9BZQ6 932 aa14.27□□□□□ -0.13
HMGN1-216ENST00000486741 SSU72P8A0A1W2PR75 194 aa14.26□□□□□ -0.13
HMGN1-216ENST00000486741 SLITRK3O94933 977 aa14.26□□□□□ -0.13
HMGN1-216ENST00000486741 VCAM1P19320 739 aa14.26□□□□□ -0.13
HMGN1-216ENST00000486741 SFNP31947 248 aa14.26□□□□□ -0.13
HMGN1-216ENST00000486741 SH3BP5LQ7L8J4 393 aa14.26□□□□□ -0.13
HMGN1-216ENST00000486741 FAM49AQ9H0Q0 323 aaPredicted RBP14.26□□□□□ -0.13
HMGN1-216ENST00000486741 PLCB1Q9NQ66 1216 aa14.26□□□□□ -0.13
HMGN1-216ENST00000486741 TISP43B9A030 160 aa14.26□□□□□ -0.13
HMGN1-216ENST00000486741 SPDYE2Q495Y8 402 aa14.26□□□□□ -0.13
HMGN1-216ENST00000486741 TMEM119Q4V9L6 283 aa14.26□□□□□ -0.13
HMGN1-216ENST00000486741 RGS16O15492 202 aaPredicted RBP14.26□□□□□ -0.13
HMGN1-216ENST00000486741 PON1P27169 355 aa14.26□□□□□ -0.13
HMGN1-216ENST00000486741 CCT5P48643 541 aa14.26□□□□□ -0.13
HMGN1-216ENST00000486741 SGO2Q562F6 1265 aa14.26□□□□□ -0.13
HMGN1-216ENST00000486741 FAM47CQ5HY64 1035 aa14.26□□□□□ -0.13
HMGN1-216ENST00000486741 KRT39Q6A163 491 aa14.26□□□□□ -0.13
HMGN1-216ENST00000486741 RHPN2Q8IUC4 686 aa14.26□□□□□ -0.13
HMGN1-216ENST00000486741 SLC10A4Q96EP9 437 aa14.26□□□□□ -0.13
HMGN1-216ENST00000486741 POP1Q99575 1024 aaKnown RBP14.26□□□□□ -0.13
HMGN1-216ENST00000486741 RIT2Q99578 217 aa14.26□□□□□ -0.13
HMGN1-216ENST00000486741 DNAJC18Q9H819 358 aa14.26□□□□□ -0.13
HMGN1-216ENST00000486741 ALCAMQ13740 583 aa14.25□□□□□ -0.13
HMGN1-216ENST00000486741 APOBEC3FQ8IUX4 373 aaKnown RBP14.25□□□□□ -0.13
HMGN1-216ENST00000486741 HAUS1Q96CS2 278 aa14.25□□□□□ -0.13
HMGN1-216ENST00000486741 RASSF4Q9H2L5 321 aa14.25□□□□□ -0.13
HMGN1-216ENST00000486741 RNF14Q9UBS8 474 aa14.25□□□□□ -0.13
HMGN1-216ENST00000486741 APEX2Q9UBZ4 518 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms