RNA–Protein interactions for RNA: ENST00000486621.1

TTC4-204, Transcript of tetratricopeptide repeat domain 4, human

TSL 2

Gene TTC4, Length 549 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TTC4-204	ENST00000486621	PFKM	P08237	780 aa		5.7	□□□□□ -1.5
TTC4-204	ENST00000486621	PRDX5	P30044	214 aa		5.7	□□□□□ -1.5
TTC4-204	ENST00000486621	MCTP2	Q6DN12	878 aa		5.7	□□□□□ -1.5
TTC4-204	ENST00000486621	PHLDB3	Q6NSJ2	640 aa		5.7	□□□□□ -1.5
TTC4-204	ENST00000486621	ZNF746	Q6NUN9	644 aa	Predicted RBP	5.7	□□□□□ -1.5
TTC4-204	ENST00000486621	CATSPERG	Q6ZRH7	1159 aa		5.7	□□□□□ -1.5
TTC4-204	ENST00000486621	KLHDC9	Q8NEP7	349 aa		5.7	□□□□□ -1.5
TTC4-204	ENST00000486621	EPS8L3	Q8TE67	593 aa	Known RBP	5.7	□□□□□ -1.5
TTC4-204	ENST00000486621	GDPD5	Q8WTR4	605 aa		5.7	□□□□□ -1.5
TTC4-204	ENST00000486621	MAML3	Q96JK9	1138 aa		5.7	□□□□□ -1.5
TTC4-204	ENST00000486621	GCM1	Q9NP62	436 aa		5.7	□□□□□ -1.5
TTC4-204	ENST00000486621	DDX4	Q9NQI0	724 aa	Known RBP	5.7	□□□□□ -1.5
TTC4-204	ENST00000486621	PPP4R2	Q9NY27	417 aa		5.7	□□□□□ -1.5
TTC4-204	ENST00000486621	BTBD7	Q9P203	1132 aa		5.7	□□□□□ -1.5
TTC4-204	ENST00000486621	CTNNA3	Q9UI47	895 aa		5.7	□□□□□ -1.5
TTC4-204	ENST00000486621	KMT2B	Q9UMN6	2715 aa	Predicted RBP	5.7	□□□□□ -1.5
TTC4-204	ENST00000486621	TRIO	O75962	3097 aa		5.7	□□□□□ -1.5
TTC4-204	ENST00000486621	CFAP47	Q6ZTR5	3102 aa		5.7	□□□□□ -1.5
TTC4-204	ENST00000486621	COL4A6	Q14031	1691 aa		5.69	□□□□□ -1.5
TTC4-204	ENST00000486621		A0A1B0GUL7	405 aa		5.69	□□□□□ -1.5
TTC4-204	ENST00000486621	NDUFB5	O43674	189 aa		5.69	□□□□□ -1.5
TTC4-204	ENST00000486621	ASGR1	P07306	291 aa		5.69	□□□□□ -1.5
TTC4-204	ENST00000486621	VCP	P55072	806 aa	Known RBP	5.69	□□□□□ -1.5
TTC4-204	ENST00000486621	ZXDA	P98168	799 aa		5.69	□□□□□ -1.5
TTC4-204	ENST00000486621	SLBP	Q14493	270 aa	Known RBP eCLIP	5.69	□□□□□ -1.5
TTC4-204	ENST00000486621	RRP1B	Q14684	758 aa	Known RBP	5.69	□□□□□ -1.5
TTC4-204	ENST00000486621	ERICH6B	Q5W0A0	696 aa		5.69	□□□□□ -1.5
TTC4-204	ENST00000486621	CCSAP	Q6IQ19	270 aa	Predicted RBP	5.69	□□□□□ -1.5
TTC4-204	ENST00000486621	LBX2	Q6XYB7	198 aa		5.69	□□□□□ -1.5
TTC4-204	ENST00000486621	HERC6	Q8IVU3	1022 aa		5.69	□□□□□ -1.5
TTC4-204	ENST00000486621	ABRA	Q8N0Z2	381 aa		5.69	□□□□□ -1.5
TTC4-204	ENST00000486621	LILRA2	Q8N149	483 aa		5.69	□□□□□ -1.5
TTC4-204	ENST00000486621	MFSD2A	Q8NA29	543 aa		5.69	□□□□□ -1.5
TTC4-204	ENST00000486621	GRIN3A	Q8TCU5	1115 aa		5.69	□□□□□ -1.5
TTC4-204	ENST00000486621	PUS3	Q9BZE2	481 aa	Known RBP	5.69	□□□□□ -1.5
TTC4-204	ENST00000486621	SPC25	Q9HBM1	224 aa		5.69	□□□□□ -1.5
TTC4-204	ENST00000486621	GINM1	Q9NU53	330 aa		5.69	□□□□□ -1.5
TTC4-204	ENST00000486621	EGFL7	Q9UHF1	273 aa		5.69	□□□□□ -1.5
TTC4-204	ENST00000486621	HERC5	Q9UII4	1024 aa	Known RBP	5.69	□□□□□ -1.5
TTC4-204	ENST00000486621	FAM184B	Q9ULE4	1060 aa		5.69	□□□□□ -1.5
TTC4-204	ENST00000486621	ZNFX1	Q9P2E3	1918 aa	Known RBP	5.69	□□□□□ -1.5
TTC4-204	ENST00000486621		A0A1B0GUL6	1792 aa		5.69	□□□□□ -1.5
TTC4-204	ENST00000486621	UMODL1	Q5DID0	1318 aa		5.69	□□□□□ -1.5
TTC4-204	ENST00000486621	CLSPN	Q9HAW4	1339 aa		5.69	□□□□□ -1.5
TTC4-204	ENST00000486621	ADAMTS20	P59510	1910 aa		5.68	□□□□□ -1.5
TTC4-204	ENST00000486621	OTOL1	A6NHN0	477 aa	Predicted RBP	5.68	□□□□□ -1.5
TTC4-204	ENST00000486621	ICMT	O60725	284 aa		5.68	□□□□□ -1.5
TTC4-204	ENST00000486621	PDE8B	O95263	885 aa		5.68	□□□□□ -1.5
TTC4-204	ENST00000486621	IFIT1	P09914	478 aa	Known RBP	5.68	□□□□□ -1.5
TTC4-204	ENST00000486621	C6orf222	P0C671	652 aa	Predicted RBP	5.68	□□□□□ -1.5
TTC4-204	ENST00000486621	ERCC3	P19447	782 aa		5.68	□□□□□ -1.5
TTC4-204	ENST00000486621	CST5	P28325	142 aa	Predicted RBP	5.68	□□□□□ -1.5
TTC4-204	ENST00000486621	KIR3DL1	P43629	444 aa		5.68	□□□□□ -1.5
TTC4-204	ENST00000486621	TNK2	Q07912	1038 aa		5.68	□□□□□ -1.5
TTC4-204	ENST00000486621	SIGLEC14	Q08ET2	396 aa		5.68	□□□□□ -1.5
TTC4-204	ENST00000486621	METTL24	Q5JXM2	366 aa		5.68	□□□□□ -1.5
TTC4-204	ENST00000486621	DEFB128	Q7Z7B8	93 aa		5.68	□□□□□ -1.5
TTC4-204	ENST00000486621	SHCBP1	Q8NEM2	672 aa		5.68	□□□□□ -1.5
TTC4-204	ENST00000486621	PDZD8	Q8NEN9	1154 aa		5.68	□□□□□ -1.5
TTC4-204	ENST00000486621	LINS1	Q8NG48	757 aa		5.68	□□□□□ -1.5
TTC4-204	ENST00000486621	RIN3	Q8TB24	985 aa		5.68	□□□□□ -1.5
TTC4-204	ENST00000486621	PABPC5	Q96DU9	382 aa	Known RBP	5.68	□□□□□ -1.5
TTC4-204	ENST00000486621	SCLY	Q96I15	445 aa		5.68	□□□□□ -1.5
TTC4-204	ENST00000486621	CHAMP1	Q96JM3	812 aa		5.68	□□□□□ -1.5
TTC4-204	ENST00000486621	COX4I2	Q96KJ9	171 aa		5.68	□□□□□ -1.5
TTC4-204	ENST00000486621	TGS1	Q96RS0	853 aa	Known RBP	5.68	□□□□□ -1.5
TTC4-204	ENST00000486621	TINF2	Q9BSI4	451 aa		5.68	□□□□□ -1.5
TTC4-204	ENST00000486621	MOV10L1	Q9BXT6	1211 aa	Known RBP	5.68	□□□□□ -1.5
TTC4-204	ENST00000486621	STK31	Q9BXU1	1019 aa		5.68	□□□□□ -1.5
TTC4-204	ENST00000486621	SEZ6L	Q9BYH1	1024 aa		5.68	□□□□□ -1.5
TTC4-204	ENST00000486621	MROH8	Q9H579	483 aa		5.68	□□□□□ -1.5
TTC4-204	ENST00000486621	ZNF552	Q9H707	407 aa	Predicted RBP	5.68	□□□□□ -1.5
TTC4-204	ENST00000486621	FBRS	Q9HAH7	460 aa		5.68	□□□□□ -1.5
TTC4-204	ENST00000486621	HOXC10	Q9NYD6	342 aa		5.68	□□□□□ -1.5
TTC4-204	ENST00000486621	PI4KB	Q9UBF8	816 aa		5.68	□□□□□ -1.5
TTC4-204	ENST00000486621	CNPY2	Q9Y2B0	182 aa		5.68	□□□□□ -1.5
TTC4-204	ENST00000486621	MYH2	Q9UKX2	1941 aa		5.68	□□□□□ -1.5
TTC4-204	ENST00000486621	ATAD5	Q96QE3	1844 aa		5.67	□□□□□ -1.5
TTC4-204	ENST00000486621	ACACB	O00763	2458 aa		5.67	□□□□□ -1.5
TTC4-204	ENST00000486621	STXBP3	O00186	592 aa		5.67	□□□□□ -1.5
TTC4-204	ENST00000486621	NCK2	O43639	380 aa		5.67	□□□□□ -1.5
TTC4-204	ENST00000486621	PSPN	O60542	156 aa		5.67	□□□□□ -1.5
TTC4-204	ENST00000486621	DUSP11	O75319	330 aa	Known RBP	5.67	□□□□□ -1.5
TTC4-204	ENST00000486621	FCER1A	P12319	257 aa		5.67	□□□□□ -1.5
TTC4-204	ENST00000486621	BMP6	P22004	513 aa		5.67	□□□□□ -1.5
TTC4-204	ENST00000486621	BTD	P43251	543 aa		5.67	□□□□□ -1.5
TTC4-204	ENST00000486621	USP14	P54578	494 aa		5.67	□□□□□ -1.5
TTC4-204	ENST00000486621	ERVK-21	P61565	698 aa		5.67	□□□□□ -1.5
TTC4-204	ENST00000486621	SSPN	Q14714	243 aa		5.67	□□□□□ -1.5
TTC4-204	ENST00000486621	SMAD2	Q15796	467 aa	Known RBP	5.67	□□□□□ -1.5
TTC4-204	ENST00000486621	PTPRO	Q16827	1216 aa		5.67	□□□□□ -1.5
TTC4-204	ENST00000486621	LETMD1	Q6P1Q0	360 aa		5.67	□□□□□ -1.5
TTC4-204	ENST00000486621	FRMD5	Q7Z6J6	570 aa		5.67	□□□□□ -1.5
TTC4-204	ENST00000486621	KIAA2013	Q8IYS2	634 aa		5.67	□□□□□ -1.5
TTC4-204	ENST00000486621	ZGPAT	Q8N5A5	531 aa	Known RBP	5.67	□□□□□ -1.5
TTC4-204	ENST00000486621	ELMO3	Q96BJ8	720 aa		5.67	□□□□□ -1.5
TTC4-204	ENST00000486621	INTS4	Q96HW7	963 aa	Known RBP	5.67	□□□□□ -1.5
TTC4-204	ENST00000486621	C12orf42	Q96LP6	360 aa		5.67	□□□□□ -1.5
TTC4-204	ENST00000486621	CITED4	Q96RK1	184 aa		5.67	□□□□□ -1.5
TTC4-204	ENST00000486621	NOC4L	Q9BVI4	516 aa	Known RBP	5.67	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms