RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 PBX3P40426 434 aa10.54□□□□□ -0.72
TMEM39A-208ENST00000486159 AKAP17AQ02040 695 aaKnown RBP10.54□□□□□ -0.72
TMEM39A-208ENST00000486159 ADAM15Q13444 863 aa10.54□□□□□ -0.72
TMEM39A-208ENST00000486159 DRP2Q13474 957 aa10.54□□□□□ -0.72
TMEM39A-208ENST00000486159 SAFBQ15424 915 aaKnown RBP eCLIP10.54□□□□□ -0.72
TMEM39A-208ENST00000486159 MIS18BP1Q6P0N0 1132 aa10.54□□□□□ -0.72
TMEM39A-208ENST00000486159 NPAS4Q8IUM7 802 aa10.54□□□□□ -0.72
TMEM39A-208ENST00000486159 CMTR2Q8IYT2 770 aaKnown RBP10.54□□□□□ -0.72
TMEM39A-208ENST00000486159 METTL13Q8N6R0 699 aa10.54□□□□□ -0.72
TMEM39A-208ENST00000486159 OCEL1Q9H607 264 aa10.54□□□□□ -0.72
TMEM39A-208ENST00000486159 CLEC1BQ9P126 229 aa10.54□□□□□ -0.72
TMEM39A-208ENST00000486159 MAFBQ9Y5Q3 323 aaPredicted RBP10.54□□□□□ -0.72
TMEM39A-208ENST00000486159 SQORQ9Y6N5 450 aa10.54□□□□□ -0.72
TMEM39A-208ENST00000486159 ESYT2A0FGR8 921 aa10.53□□□□□ -0.72
TMEM39A-208ENST00000486159 C9IYK1 514 aa10.53□□□□□ -0.72
TMEM39A-208ENST00000486159 hCG_1984214I3L0E3 225 aa10.53□□□□□ -0.72
TMEM39A-208ENST00000486159 CHMP2AO43633 222 aa10.53□□□□□ -0.72
TMEM39A-208ENST00000486159 YEATS4O95619 227 aa10.53□□□□□ -0.72
TMEM39A-208ENST00000486159 GLP2RO95838 553 aa10.53□□□□□ -0.72
TMEM39A-208ENST00000486159 NRIP1P48552 1158 aa10.53□□□□□ -0.72
TMEM39A-208ENST00000486159 SARSP49591 514 aaKnown RBP10.53□□□□□ -0.72
TMEM39A-208ENST00000486159 ERVFC1P60507 584 aa10.53□□□□□ -0.72
TMEM39A-208ENST00000486159 DSC3Q14574 896 aa10.53□□□□□ -0.72
TMEM39A-208ENST00000486159 FOXD4L6Q3SYB3 417 aaPredicted RBP10.53□□□□□ -0.72
TMEM39A-208ENST00000486159 ZNF484Q5JVG2 852 aa10.53□□□□□ -0.72
TMEM39A-208ENST00000486159 FAM160B1Q5W0V3 765 aa10.53□□□□□ -0.72
TMEM39A-208ENST00000486159 LRSAM1Q6UWE0 723 aa10.53□□□□□ -0.72
TMEM39A-208ENST00000486159 FOXD4L3Q6VB84 417 aaPredicted RBP10.53□□□□□ -0.72
TMEM39A-208ENST00000486159 LRRC55Q6ZSA7 311 aa10.53□□□□□ -0.72
TMEM39A-208ENST00000486159 REXO1Q8N1G1 1221 aaKnown RBP10.53□□□□□ -0.72
TMEM39A-208ENST00000486159 NME8Q8N427 588 aa10.53□□□□□ -0.72
TMEM39A-208ENST00000486159 LINC01465Q8N7H1 131 aa10.53□□□□□ -0.72
TMEM39A-208ENST00000486159 ZNF713Q8N859 430 aaPredicted RBP10.53□□□□□ -0.72
TMEM39A-208ENST00000486159 VN1R2Q8NFZ6 395 aa10.53□□□□□ -0.72
TMEM39A-208ENST00000486159 COL26A1Q96A83 441 aa10.53□□□□□ -0.72
TMEM39A-208ENST00000486159 FTHL17Q9BXU8 183 aa10.53□□□□□ -0.72
TMEM39A-208ENST00000486159 LMAN2LQ9H0V9 348 aa10.53□□□□□ -0.72
TMEM39A-208ENST00000486159 UNC45AQ9H3U1 944 aa10.53□□□□□ -0.72
TMEM39A-208ENST00000486159 CWH43Q9H720 699 aa10.53□□□□□ -0.72
TMEM39A-208ENST00000486159 GRPEL1Q9HAV7 217 aa10.53□□□□□ -0.72
TMEM39A-208ENST00000486159 GDPD2Q9HCC8 539 aa10.53□□□□□ -0.72
TMEM39A-208ENST00000486159 C6orf50Q9HD87 102 aa10.53□□□□□ -0.72
TMEM39A-208ENST00000486159 RGS18Q9NS28 235 aa10.53□□□□□ -0.72
TMEM39A-208ENST00000486159 GJB4Q9NTQ9 266 aa10.53□□□□□ -0.72
TMEM39A-208ENST00000486159 DDX19AQ9NUU7 478 aaKnown RBP10.53□□□□□ -0.72
TMEM39A-208ENST00000486159 TYW1Q9NV66 732 aaKnown RBP10.53□□□□□ -0.72
TMEM39A-208ENST00000486159 TMEM63CQ9P1W3 806 aa10.53□□□□□ -0.72
TMEM39A-208ENST00000486159 LRFN2Q9ULH4 789 aa10.53□□□□□ -0.72
TMEM39A-208ENST00000486159 BARX2Q9UMQ3 279 aaPredicted RBP10.53□□□□□ -0.72
TMEM39A-208ENST00000486159 SAMM50Q9Y512 469 aa10.53□□□□□ -0.72
TMEM39A-208ENST00000486159 PCDHB7Q9Y5E2 793 aa10.53□□□□□ -0.72
TMEM39A-208ENST00000486159 PCDHA10Q9Y5I2 948 aa10.53□□□□□ -0.72
TMEM39A-208ENST00000486159 CACNA1BQ00975 2339 aa10.52□□□□□ -0.72
TMEM39A-208ENST00000486159 GADD45BO75293 160 aaPredicted RBP10.52□□□□□ -0.73
TMEM39A-208ENST00000486159 STBD1O95210 358 aa10.52□□□□□ -0.73
TMEM39A-208ENST00000486159 TDP2O95551 362 aa10.52□□□□□ -0.73
TMEM39A-208ENST00000486159 U2AF2P26368 475 aaKnown RBP eCLIP10.52□□□□□ -0.733e-9■■■□□ 18.7
TMEM39A-208ENST00000486159 CIITAP33076 1130 aa10.52□□□□□ -0.73
TMEM39A-208ENST00000486159 SLC26A2P50443 739 aa10.52□□□□□ -0.73
TMEM39A-208ENST00000486159 NLRP11P59045 1033 aaKnown RBP10.52□□□□□ -0.73
TMEM39A-208ENST00000486159 NPY5RQ15761 445 aa10.52□□□□□ -0.73
TMEM39A-208ENST00000486159 ZNF746Q6NUN9 644 aaPredicted RBP10.52□□□□□ -0.73
TMEM39A-208ENST00000486159 EFCAB12Q6NXP0 572 aa10.52□□□□□ -0.73
TMEM39A-208ENST00000486159 FEZF2Q8TBJ5 459 aa10.52□□□□□ -0.73
TMEM39A-208ENST00000486159 KCNG4Q8TDN1 519 aa10.52□□□□□ -0.73
TMEM39A-208ENST00000486159 P2RX5Q93086 422 aa10.52□□□□□ -0.73
TMEM39A-208ENST00000486159 CHAMP1Q96JM3 812 aa10.52□□□□□ -0.73
TMEM39A-208ENST00000486159 MSLNLQ96KJ4 702 aa10.52□□□□□ -0.73
TMEM39A-208ENST00000486159 PLVAPQ9BX97 442 aa10.52□□□□□ -0.73
TMEM39A-208ENST00000486159 ADAMTS10Q9H324 1103 aa10.52□□□□□ -0.73
TMEM39A-208ENST00000486159 CDH22Q9UJ99 828 aa10.52□□□□□ -0.73
TMEM39A-208ENST00000486159 BDP1A6H8Y1 2624 aa10.52□□□□□ -0.73
TMEM39A-208ENST00000486159 COL1A2P08123 1366 aa10.52□□□□□ -0.73
TMEM39A-208ENST00000486159 BAHCC1Q9P281 2608 aa10.51□□□□□ -0.73
TMEM39A-208ENST00000486159 A0A1W2PQ27 194 aa10.51□□□□□ -0.73
TMEM39A-208ENST00000486159 A0A1W2PQ64 194 aa10.51□□□□□ -0.73
TMEM39A-208ENST00000486159 A0A1W2PQD8 194 aa10.51□□□□□ -0.73
TMEM39A-208ENST00000486159 DENND3A2RUS2 1198 aa10.51□□□□□ -0.73
TMEM39A-208ENST00000486159 PSAPP07602 524 aa10.51□□□□□ -0.73
TMEM39A-208ENST00000486159 STAG3L1P0CL83 205 aa10.51□□□□□ -0.73
TMEM39A-208ENST00000486159 NASPP49321 788 aaPredicted RBP10.51□□□□□ -0.73
TMEM39A-208ENST00000486159 NDUFV1P49821 464 aa10.51□□□□□ -0.73
TMEM39A-208ENST00000486159 CRYBB1P53674 252 aaPredicted RBP10.51□□□□□ -0.73
TMEM39A-208ENST00000486159 FAM189BP81408 668 aa10.51□□□□□ -0.73
TMEM39A-208ENST00000486159 PRKCEQ02156 737 aa10.51□□□□□ -0.73
TMEM39A-208ENST00000486159 SMAD2Q15796 467 aaKnown RBP10.51□□□□□ -0.73
TMEM39A-208ENST00000486159 LONRF3Q496Y0 759 aa10.51□□□□□ -0.73
TMEM39A-208ENST00000486159 SPOUT1Q5T280 376 aaKnown RBP10.51□□□□□ -0.73
TMEM39A-208ENST00000486159 SLC24A5Q71RS6 500 aa10.51□□□□□ -0.73
TMEM39A-208ENST00000486159 ADHFE1Q8IWW8 467 aa10.51□□□□□ -0.73
TMEM39A-208ENST00000486159 TBCKQ8TEA7 893 aa10.51□□□□□ -0.73
TMEM39A-208ENST00000486159 ANP32BQ92688 251 aaKnown RBP10.51□□□□□ -0.73
TMEM39A-208ENST00000486159 CASD1Q96PB1 797 aa10.51□□□□□ -0.73
TMEM39A-208ENST00000486159 CEP89Q96ST8 783 aa10.51□□□□□ -0.73
TMEM39A-208ENST00000486159 APOL5Q9BWW9 433 aa10.51□□□□□ -0.73
TMEM39A-208ENST00000486159 GLT8D2Q9H1C3 349 aa10.51□□□□□ -0.73
TMEM39A-208ENST00000486159 FOXP1Q9H334 677 aaPredicted RBP10.51□□□□□ -0.73
TMEM39A-208ENST00000486159 DISC1Q9NRI5 854 aa10.51□□□□□ -0.73
TMEM39A-208ENST00000486159 TBC1D22BQ9NU19 505 aa10.51□□□□□ -0.73
TMEM39A-208ENST00000486159 TFIP11Q9UBB9 837 aaKnown RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms