RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 MCM9Q9NXL9 1143 aa7.92□□□□□ -1.14
SMC4-217ENST00000485867 CCDC39Q9UFE4 941 aa7.92□□□□□ -1.14
SMC4-217ENST00000485867 FPGT-TNNI3KV9GXZ4 949 aa7.92□□□□□ -1.14
SMC4-217ENST00000485867 C5orf42Q9H799 3197 aa7.92□□□□□ -1.14
SMC4-217ENST00000485867 DCHS1Q96JQ0 3298 aa7.92□□□□□ -1.14
SMC4-217ENST00000485867 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.91□□□□□ -1.14
SMC4-217ENST00000485867 LINC01553A4QN01 128 aa7.91□□□□□ -1.14
SMC4-217ENST00000485867 ATP2A1O14983 1001 aa7.91□□□□□ -1.14
SMC4-217ENST00000485867 GPR182O15218 404 aa7.91□□□□□ -1.14
SMC4-217ENST00000485867 DYNC1LI2O43237 492 aaPredicted RBP7.91□□□□□ -1.14
SMC4-217ENST00000485867 IQCF3P0C7M6 154 aa7.91□□□□□ -1.14
SMC4-217ENST00000485867 RAB6AP20340 208 aa7.91□□□□□ -1.14
SMC4-217ENST00000485867 TXKP42681 527 aa7.91□□□□□ -1.14
SMC4-217ENST00000485867 KCNJ6P48051 423 aa7.91□□□□□ -1.14
SMC4-217ENST00000485867 G3BP1Q13283 466 aaKnown RBP eCLIP7.91□□□□□ -1.14
SMC4-217ENST00000485867 MAP7Q14244 749 aa7.91□□□□□ -1.14
SMC4-217ENST00000485867 DYMQ7RTS9 669 aa7.91□□□□□ -1.14
SMC4-217ENST00000485867 ERMP1Q7Z2K6 904 aa7.91□□□□□ -1.14
SMC4-217ENST00000485867 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.91□□□□□ -1.14
SMC4-217ENST00000485867 DYNLL2Q96FJ2 89 aa7.91□□□□□ -1.14
SMC4-217ENST00000485867 PRRX2Q99811 253 aa7.91□□□□□ -1.14
SMC4-217ENST00000485867 SLF1Q9BQI6 1058 aa7.91□□□□□ -1.14
SMC4-217ENST00000485867 UPF3BQ9BZI7 483 aaKnown RBP7.91□□□□□ -1.14
SMC4-217ENST00000485867 ALG13Q9NP73 1137 aaKnown RBP7.91□□□□□ -1.14
SMC4-217ENST00000485867 GPR108Q9NPR9 543 aa7.91□□□□□ -1.14
SMC4-217ENST00000485867 SWAP70Q9UH65 585 aa7.91□□□□□ -1.14
SMC4-217ENST00000485867 MUTYHQ9UIF7 546 aa7.91□□□□□ -1.14
SMC4-217ENST00000485867 FAM50BQ9Y247 325 aa7.91□□□□□ -1.14
SMC4-217ENST00000485867 RALGAPA2Q2PPJ7 1873 aa7.9□□□□□ -1.14
SMC4-217ENST00000485867 PNMA6EA0A0J9YXQ4 647 aa7.9□□□□□ -1.14
SMC4-217ENST00000485867 CYP26A1O43174 497 aa7.9□□□□□ -1.14
SMC4-217ENST00000485867 EEF2P13639 858 aaKnown RBP7.9□□□□□ -1.14
SMC4-217ENST00000485867 DEFB103AP81534 67 aa7.9□□□□□ -1.14
SMC4-217ENST00000485867 CNTN2Q02246 1040 aa7.9□□□□□ -1.14
SMC4-217ENST00000485867 COL19A1Q14993 1142 aa7.9□□□□□ -1.14
SMC4-217ENST00000485867 ALDH1L2Q3SY69 923 aa7.9□□□□□ -1.14
SMC4-217ENST00000485867 CPXCR1Q8N123 301 aa7.9□□□□□ -1.14
SMC4-217ENST00000485867 ANKRD35Q8N283 1001 aa7.9□□□□□ -1.14
SMC4-217ENST00000485867 FAM133AQ8N9E0 248 aa7.9□□□□□ -1.14
SMC4-217ENST00000485867 EDAQ92838 391 aa7.9□□□□□ -1.14
SMC4-217ENST00000485867 CCDC74AQ96AQ1 378 aa7.9□□□□□ -1.14
SMC4-217ENST00000485867 MRPL38Q96DV4 380 aaKnown RBP7.9□□□□□ -1.14
SMC4-217ENST00000485867 NUP88Q99567 741 aaPredicted RBP7.9□□□□□ -1.14
SMC4-217ENST00000485867 CRNKL1Q9BZJ0 848 aaKnown RBP7.9□□□□□ -1.14
SMC4-217ENST00000485867 DNAJC25Q9H1X3 360 aa7.9□□□□□ -1.14
SMC4-217ENST00000485867 RAD18Q9NS91 495 aa7.9□□□□□ -1.14
SMC4-217ENST00000485867 SMC4Q9NTJ3 1288 aa7.9□□□□□ -1.14
SMC4-217ENST00000485867 AP4E1Q9UPM8 1137 aa7.9□□□□□ -1.14
SMC4-217ENST00000485867 Q9Y3F1 56 aa7.9□□□□□ -1.14
SMC4-217ENST00000485867 COL4A6Q14031 1691 aa7.89□□□□□ -1.15
SMC4-217ENST00000485867 NCOR2Q9Y618 2525 aa7.89□□□□□ -1.15
SMC4-217ENST00000485867 TMEM221A6NGB7 291 aa7.89□□□□□ -1.15
SMC4-217ENST00000485867 M0R296 226 aa7.89□□□□□ -1.15
SMC4-217ENST00000485867 EIF1AYO14602 144 aaKnown RBP7.89□□□□□ -1.15
SMC4-217ENST00000485867 GJB5O95377 273 aa7.89□□□□□ -1.15
SMC4-217ENST00000485867 GNAI3P08754 354 aa7.89□□□□□ -1.15
SMC4-217ENST00000485867 PKN1Q16512 942 aa7.89□□□□□ -1.15
SMC4-217ENST00000485867 TIGD5Q53EQ6 642 aa7.89□□□□□ -1.15
SMC4-217ENST00000485867 TMEM63BQ5T3F8 832 aa7.89□□□□□ -1.15
SMC4-217ENST00000485867 TMED8Q6PL24 325 aaPredicted RBP7.89□□□□□ -1.15
SMC4-217ENST00000485867 SEZ6L2Q6UXD5 910 aa7.89□□□□□ -1.15
SMC4-217ENST00000485867 VSIG10LQ86VR7 867 aa7.89□□□□□ -1.15
SMC4-217ENST00000485867 SUGP1Q8IWZ8 645 aaKnown RBP7.89□□□□□ -1.15
SMC4-217ENST00000485867 RETREG2Q8NC44 543 aa7.89□□□□□ -1.15
SMC4-217ENST00000485867 CHST13Q8NET6 341 aa7.89□□□□□ -1.15
SMC4-217ENST00000485867 SDR42E1Q8WUS8 393 aa7.89□□□□□ -1.15
SMC4-217ENST00000485867 PABPC5Q96DU9 382 aaKnown RBP7.89□□□□□ -1.15
SMC4-217ENST00000485867 CCDC17Q96LX7 622 aa7.89□□□□□ -1.15
SMC4-217ENST00000485867 RAD9AQ99638 391 aa7.89□□□□□ -1.15
SMC4-217ENST00000485867 ANTXR1Q9H6X2 564 aa7.89□□□□□ -1.15
SMC4-217ENST00000485867 RAVER2Q9HCJ3 691 aaKnown RBP7.89□□□□□ -1.15
SMC4-217ENST00000485867 DCP1AQ9NPI6 582 aaPredicted RBP7.89□□□□□ -1.15
SMC4-217ENST00000485867 PDGFCQ9NRA1 345 aa7.89□□□□□ -1.15
SMC4-217ENST00000485867 FBXO40Q9UH90 709 aa7.89□□□□□ -1.15
SMC4-217ENST00000485867 DBNLQ9UJU6 430 aaKnown RBP7.89□□□□□ -1.15
SMC4-217ENST00000485867 DDX49Q9Y6V7 483 aaKnown RBP7.89□□□□□ -1.15
SMC4-217ENST00000485867 MYH7P12883 1935 aa7.88□□□□□ -1.15
SMC4-217ENST00000485867 EP300Q09472 2414 aaPredicted RBP7.88□□□□□ -1.15
SMC4-217ENST00000485867 ASB14A6NK59 587 aa7.88□□□□□ -1.15
SMC4-217ENST00000485867 ASPAP45381 313 aa7.88□□□□□ -1.15
SMC4-217ENST00000485867 PURAQ00577 322 aaKnown RBP7.88□□□□□ -1.15
SMC4-217ENST00000485867 AP3B2Q13367 1082 aa7.88□□□□□ -1.15
SMC4-217ENST00000485867 GPNMBQ14956 572 aa7.88□□□□□ -1.15
SMC4-217ENST00000485867 SMAD2Q15796 467 aaKnown RBP7.88□□□□□ -1.15
SMC4-217ENST00000485867 TCEAL5Q5H9L2 206 aa7.88□□□□□ -1.15
SMC4-217ENST00000485867 FAM47CQ5HY64 1035 aa7.88□□□□□ -1.15
SMC4-217ENST00000485867 RPS26P11Q5JNZ5 115 aaPredicted RBP7.88□□□□□ -1.15
SMC4-217ENST00000485867 IQSEC1Q6DN90 963 aa7.88□□□□□ -1.15
SMC4-217ENST00000485867 TAPT1Q6NXT6 567 aa7.88□□□□□ -1.15
SMC4-217ENST00000485867 FBXO16Q8IX29 292 aaPredicted RBP7.88□□□□□ -1.15
SMC4-217ENST00000485867 PRPF38AQ8NAV1 312 aaKnown RBP7.88□□□□□ -1.15
SMC4-217ENST00000485867 PPP1R13LQ8WUF5 828 aa7.88□□□□□ -1.15
SMC4-217ENST00000485867 C17orf80Q9BSJ5 609 aa7.88□□□□□ -1.15
SMC4-217ENST00000485867 KANSL2Q9H9L4 492 aa7.88□□□□□ -1.15
SMC4-217ENST00000485867 SLC38A10Q9HBR0 1119 aa7.88□□□□□ -1.15
SMC4-217ENST00000485867 MRS2Q9HD23 443 aa7.88□□□□□ -1.15
SMC4-217ENST00000485867 C1GALT1Q9NS00 363 aa7.88□□□□□ -1.15
SMC4-217ENST00000485867 NOB1Q9ULX3 412 aaKnown RBP7.88□□□□□ -1.15
SMC4-217ENST00000485867 RNF114Q9Y508 228 aa7.88□□□□□ -1.15
SMC4-217ENST00000485867 MYO15AQ9UKN7 3530 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms