RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 PLA2G2CQ5R387 149 aa6.44□□□□□ -1.38
CUX1-208ENST00000485792 LRCH2Q5VUJ6 765 aa6.44□□□□□ -1.38
CUX1-208ENST00000485792 SWSAP1Q6NVH7 229 aa6.44□□□□□ -1.38
CUX1-208ENST00000485792 MIS18BP1Q6P0N0 1132 aa6.44□□□□□ -1.38
CUX1-208ENST00000485792 FAM173BQ6P4H8 233 aa6.44□□□□□ -1.38
CUX1-208ENST00000485792 CNKSR3Q6P9H4 555 aa6.44□□□□□ -1.38
CUX1-208ENST00000485792 MTHFD1LQ6UB35 978 aa6.44□□□□□ -1.38
CUX1-208ENST00000485792 ANO5Q75V66 913 aa6.44□□□□□ -1.38
CUX1-208ENST00000485792 OTOP2Q7RTS6 562 aa6.44□□□□□ -1.38
CUX1-208ENST00000485792 KCNK18Q7Z418 384 aa6.44□□□□□ -1.38
CUX1-208ENST00000485792 DEFB128Q7Z7B8 93 aa6.44□□□□□ -1.38
CUX1-208ENST00000485792 RTN4RL1Q86UN2 441 aaPredicted RBP6.44□□□□□ -1.38
CUX1-208ENST00000485792 NME8Q8N427 588 aa6.44□□□□□ -1.38
CUX1-208ENST00000485792 TNPO1Q92973 898 aaKnown RBP6.44□□□□□ -1.38
CUX1-208ENST00000485792 SNX21Q969T3 373 aa6.44□□□□□ -1.38
CUX1-208ENST00000485792 INTS4Q96HW7 963 aaKnown RBP6.44□□□□□ -1.38
CUX1-208ENST00000485792 ZNF668Q96K58 619 aaPredicted RBP6.44□□□□□ -1.38
CUX1-208ENST00000485792 PPP1R16BQ96T49 567 aa6.44□□□□□ -1.38
CUX1-208ENST00000485792 MMTAG2Q9BU76 263 aaKnown RBP6.44□□□□□ -1.38
CUX1-208ENST00000485792 TEKT3Q9BXF9 490 aa6.44□□□□□ -1.38
CUX1-208ENST00000485792 XPNPEP1Q9NQW7 623 aa6.44□□□□□ -1.38
CUX1-208ENST00000485792 ZNF302Q9NR11 478 aa6.44□□□□□ -1.38
CUX1-208ENST00000485792 DISC1Q9NRI5 854 aa6.44□□□□□ -1.38
CUX1-208ENST00000485792 RNF19AQ9NV58 838 aa6.44□□□□□ -1.38
CUX1-208ENST00000485792 MTMR10Q9NXD2 777 aa6.44□□□□□ -1.38
CUX1-208ENST00000485792 TUBE1Q9UJT0 475 aa6.44□□□□□ -1.38
CUX1-208ENST00000485792 PCDHB6Q9Y5E3 794 aa6.44□□□□□ -1.38
CUX1-208ENST00000485792 CUL9Q8IWT3 2517 aa6.44□□□□□ -1.38
CUX1-208ENST00000485792 BDP1A6H8Y1 2624 aa6.44□□□□□ -1.38
CUX1-208ENST00000485792 VWA8A3KMH1 1905 aa6.43□□□□□ -1.38
CUX1-208ENST00000485792 ABHD14A-ACY1A0A1B0GW23 586 aa6.43□□□□□ -1.38
CUX1-208ENST00000485792 RSPH10B2B2RC85 870 aa6.43□□□□□ -1.38
CUX1-208ENST00000485792 CHMP2AO43633 222 aa6.43□□□□□ -1.38
CUX1-208ENST00000485792 B4GALT3O60512 393 aa6.43□□□□□ -1.38
CUX1-208ENST00000485792 CCNT1O60563 726 aaKnown RBP6.43□□□□□ -1.38
CUX1-208ENST00000485792 LPXNO60711 386 aa6.43□□□□□ -1.38
CUX1-208ENST00000485792 GAS7O60861 476 aa6.43□□□□□ -1.38
CUX1-208ENST00000485792 GPR37L1O60883 481 aa6.43□□□□□ -1.38
CUX1-208ENST00000485792 GPR32O75388 356 aa6.43□□□□□ -1.38
CUX1-208ENST00000485792 RSPH10BP0C881 870 aa6.43□□□□□ -1.38
CUX1-208ENST00000485792 XRCC6P12956 609 aaKnown RBP eCLIP6.43□□□□□ -1.38
CUX1-208ENST00000485792 POU3F3P20264 500 aaPredicted RBP6.43□□□□□ -1.38
CUX1-208ENST00000485792 KLRC1P26715 233 aa6.43□□□□□ -1.38
CUX1-208ENST00000485792 GATMP50440 423 aa6.43□□□□□ -1.38
CUX1-208ENST00000485792 CLCN3P51790 818 aa6.43□□□□□ -1.38
CUX1-208ENST00000485792 HTRA4P83105 476 aaPredicted RBP6.43□□□□□ -1.38
CUX1-208ENST00000485792 PPFIA1Q13136 1202 aa6.43□□□□□ -1.38
CUX1-208ENST00000485792 EPHA7Q15375 998 aa6.43□□□□□ -1.38
CUX1-208ENST00000485792 LETM2Q2VYF4 491 aa6.43□□□□□ -1.38
CUX1-208ENST00000485792 FBXO47Q5MNV8 452 aa6.43□□□□□ -1.38
CUX1-208ENST00000485792 FAM160B1Q5W0V3 765 aa6.43□□□□□ -1.38
CUX1-208ENST00000485792 PTCRAQ6ISU1 281 aaPredicted RBP6.43□□□□□ -1.38
CUX1-208ENST00000485792 PDXDC2PQ6P474 469 aa6.43□□□□□ -1.38
CUX1-208ENST00000485792 NOSTRINQ8IVI9 506 aa6.43□□□□□ -1.38
CUX1-208ENST00000485792 C4orf19Q8IY42 314 aa6.43□□□□□ -1.38
CUX1-208ENST00000485792 SLFN12Q8IYM2 578 aa6.43□□□□□ -1.38
CUX1-208ENST00000485792 LRRC71Q8N4P6 559 aa6.43□□□□□ -1.38
CUX1-208ENST00000485792 RETREG2Q8NC44 543 aa6.43□□□□□ -1.38
CUX1-208ENST00000485792 FEZF2Q8TBJ5 459 aa6.43□□□□□ -1.38
CUX1-208ENST00000485792 DNAJB3Q8WWF6 145 aa6.43□□□□□ -1.38
CUX1-208ENST00000485792 GLG1Q92896 1179 aa6.43□□□□□ -1.38
CUX1-208ENST00000485792 C8orf76Q96K31 380 aa6.43□□□□□ -1.38
CUX1-208ENST00000485792 RNPC3Q96LT9 517 aaKnown RBP6.43□□□□□ -1.38
CUX1-208ENST00000485792 AZI2Q9H6S1 392 aa6.43□□□□□ -1.38
CUX1-208ENST00000485792 UPF2Q9HAU5 1272 aaKnown RBP6.43□□□□□ -1.38
CUX1-208ENST00000485792 RGL1Q9NZL6 768 aa6.43□□□□□ -1.38
CUX1-208ENST00000485792 GABBR1Q9UBS5 961 aa6.43□□□□□ -1.38
CUX1-208ENST00000485792 PPME1Q9Y570 386 aa6.43□□□□□ -1.38
CUX1-208ENST00000485792 MORC2Q9Y6X9 1032 aaPredicted RBP6.43□□□□□ -1.38
CUX1-208ENST00000485792 TCF20Q9UGU0 1960 aaKnown RBP6.43□□□□□ -1.38
CUX1-208ENST00000485792 MYO10Q9HD67 2058 aa6.43□□□□□ -1.38
CUX1-208ENST00000485792 DOCK6Q96HP0 2047 aa6.42□□□□□ -1.38
CUX1-208ENST00000485792 MEIS3P2A8K0S8 358 aa6.42□□□□□ -1.38
CUX1-208ENST00000485792 MAGEB2O15479 319 aa6.42□□□□□ -1.38
CUX1-208ENST00000485792 GFRA3O60609 400 aa6.42□□□□□ -1.38
CUX1-208ENST00000485792 EFCAB14O75071 495 aa6.42□□□□□ -1.38
CUX1-208ENST00000485792 MAFO75444 373 aaPredicted RBP6.42□□□□□ -1.38
CUX1-208ENST00000485792 MED24O75448 989 aa6.42□□□□□ -1.38
CUX1-208ENST00000485792 P4HBP07237 508 aaKnown RBP6.42□□□□□ -1.38
CUX1-208ENST00000485792 GHRP10912 638 aa6.42□□□□□ -1.38
CUX1-208ENST00000485792 ATF7P17544 494 aaPredicted RBP6.42□□□□□ -1.38
CUX1-208ENST00000485792 MUTP22033 750 aa6.42□□□□□ -1.38
CUX1-208ENST00000485792 FGFR4P22455 802 aa6.42□□□□□ -1.38
CUX1-208ENST00000485792 GJB2P29033 226 aa6.42□□□□□ -1.38
CUX1-208ENST00000485792 THPOP40225 353 aa6.42□□□□□ -1.38
CUX1-208ENST00000485792 PRPHP41219 470 aa6.42□□□□□ -1.38
CUX1-208ENST00000485792 QARSP47897 775 aaKnown RBP6.42□□□□□ -1.38
CUX1-208ENST00000485792 NPEPPSP55786 919 aa6.42□□□□□ -1.38
CUX1-208ENST00000485792 PSMC5P62195 406 aa6.42□□□□□ -1.38
CUX1-208ENST00000485792 IGBP1P78318 339 aa6.42□□□□□ -1.38
CUX1-208ENST00000485792 FAM189BP81408 668 aa6.42□□□□□ -1.38
CUX1-208ENST00000485792 MRPS6P82932 125 aaKnown RBP6.42□□□□□ -1.38
CUX1-208ENST00000485792 RESTQ13127 1097 aa6.42□□□□□ -1.38
CUX1-208ENST00000485792 PDIA5Q14554 519 aa6.42□□□□□ -1.38
CUX1-208ENST00000485792 GRIN2CQ14957 1233 aa6.42□□□□□ -1.38
CUX1-208ENST00000485792 TMEM266Q2M3C6 531 aa6.42□□□□□ -1.38
CUX1-208ENST00000485792 XKR3Q5GH77 459 aa6.42□□□□□ -1.38
CUX1-208ENST00000485792 LIAT1Q6ZQX7 453 aa6.42□□□□□ -1.38
CUX1-208ENST00000485792 TMEM130Q8N3G9 435 aa6.42□□□□□ -1.38
CUX1-208ENST00000485792 IGSF22Q8N9C0 903 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms