RNA–Protein interactions for RNA: ENST00000485790.1

SCAF4-206, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 2

Gene SCAF4, Length 1,282 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-206ENST00000485790 TCF25Q9BQ70 676 aa15.43■□□□□ 0.06
SCAF4-206ENST00000485790 BRMS1Q9HCU9 246 aa15.43■□□□□ 0.06
SCAF4-206ENST00000485790 KCNJ14Q9UNX9 436 aa15.43■□□□□ 0.06
SCAF4-206ENST00000485790 A0A087WZ62 844 aa15.42■□□□□ 0.06
SCAF4-206ENST00000485790 IGKV6-21A0A0C4DH24 114 aa15.42■□□□□ 0.06
SCAF4-206ENST00000485790 TBX3O15119 743 aa15.42■□□□□ 0.06
SCAF4-206ENST00000485790 CCNT1O60563 726 aaKnown RBP15.42■□□□□ 0.06
SCAF4-206ENST00000485790 HOXB8P17481 243 aaPredicted RBP15.42■□□□□ 0.06
SCAF4-206ENST00000485790 NCBP1Q09161 790 aaKnown RBP15.42■□□□□ 0.06
SCAF4-206ENST00000485790 HERC4Q5GLZ8 1057 aaPredicted RBP15.42■□□□□ 0.06
SCAF4-206ENST00000485790 TWF2Q6IBS0 349 aaKnown RBP15.42■□□□□ 0.06
SCAF4-206ENST00000485790 GLB1LQ6UWU2 654 aa15.42■□□□□ 0.06
SCAF4-206ENST00000485790 B3GNT9Q6UX72 402 aa15.42■□□□□ 0.06
SCAF4-206ENST00000485790 TMEM184AQ6ZMB5 413 aa15.42■□□□□ 0.06
SCAF4-206ENST00000485790 LRRC55Q6ZSA7 311 aa15.42■□□□□ 0.06
SCAF4-206ENST00000485790 CATSPER4Q7RTX7 472 aa15.42■□□□□ 0.06
SCAF4-206ENST00000485790 SLFN12Q8IYM2 578 aa15.42■□□□□ 0.06
SCAF4-206ENST00000485790 CEP170P1Q96L14 293 aa15.42■□□□□ 0.06
SCAF4-206ENST00000485790 FDXACB1Q9BRP7 624 aaPredicted RBP15.42■□□□□ 0.06
SCAF4-206ENST00000485790 PHF20Q9BVI0 1012 aa15.42■□□□□ 0.06
SCAF4-206ENST00000485790 TRAIPQ9BWF2 469 aa15.42■□□□□ 0.06
SCAF4-206ENST00000485790 PHF7Q9BWX1 381 aaPredicted RBP15.42■□□□□ 0.06
SCAF4-206ENST00000485790 CYP26B1Q9NR63 512 aa15.42■□□□□ 0.06
SCAF4-206ENST00000485790 BARX2Q9UMQ3 279 aaPredicted RBP15.42■□□□□ 0.06
SCAF4-206ENST00000485790 DOCK5Q9H7D0 1870 aa15.42■□□□□ 0.06
SCAF4-206ENST00000485790 FSCN2O14926 492 aa15.41■□□□□ 0.06
SCAF4-206ENST00000485790 ASAP2O43150 1006 aa15.41■□□□□ 0.06
SCAF4-206ENST00000485790 PFKFB2O60825 505 aa15.41■□□□□ 0.06
SCAF4-206ENST00000485790 CSDE1O75534 798 aaKnown RBP15.41■□□□□ 0.06
SCAF4-206ENST00000485790 ATF7P17544 494 aaPredicted RBP15.41■□□□□ 0.06
SCAF4-206ENST00000485790 FGFR4P22455 802 aa15.41■□□□□ 0.06
SCAF4-206ENST00000485790 PHKA2P46019 1235 aa15.41■□□□□ 0.06
SCAF4-206ENST00000485790 RAB27AP51159 221 aa15.41■□□□□ 0.06
SCAF4-206ENST00000485790 ANAPC15P60006 121 aa15.41■□□□□ 0.06
SCAF4-206ENST00000485790 PPP2R5CQ13362 524 aa15.41■□□□□ 0.06
SCAF4-206ENST00000485790 SMC1AQ14683 1233 aaKnown RBP15.41■□□□□ 0.06
SCAF4-206ENST00000485790 PLPP4Q5VZY2 271 aa15.41■□□□□ 0.06
SCAF4-206ENST00000485790 ANO5Q75V66 913 aa15.41■□□□□ 0.06
SCAF4-206ENST00000485790 MRPL43Q8N983 215 aaKnown RBP15.41■□□□□ 0.06
SCAF4-206ENST00000485790 HELQQ8TDG4 1101 aa15.41■□□□□ 0.06
SCAF4-206ENST00000485790 EDAQ92838 391 aa15.41■□□□□ 0.06
SCAF4-206ENST00000485790 AIFM3Q96NN9 605 aa15.41■□□□□ 0.06
SCAF4-206ENST00000485790 KCNH6Q9H252 994 aa15.41■□□□□ 0.06
SCAF4-206ENST00000485790 STK39Q9UEW8 545 aa15.41■□□□□ 0.06
SCAF4-206ENST00000485790 USP15Q9Y4E8 981 aaPredicted RBP15.41■□□□□ 0.06
SCAF4-206ENST00000485790 COL4A4P53420 1690 aaPredicted RBP15.41■□□□□ 0.06
SCAF4-206ENST00000485790 ZNF623O75123 536 aa15.4■□□□□ 0.06
SCAF4-206ENST00000485790 STBD1O95210 358 aa15.4■□□□□ 0.06
SCAF4-206ENST00000485790 CXCL14O95715 111 aa15.4■□□□□ 0.06
SCAF4-206ENST00000485790 RFC5P40937 340 aa15.4■□□□□ 0.06
SCAF4-206ENST00000485790 TECP42680 631 aa15.4■□□□□ 0.06
SCAF4-206ENST00000485790 POLGP54098 1239 aaPredicted RBP15.4■□□□□ 0.06
SCAF4-206ENST00000485790 RNASELQ05823 741 aaKnown RBP15.4■□□□□ 0.06
SCAF4-206ENST00000485790 SCRN1Q12765 414 aa15.4■□□□□ 0.06
SCAF4-206ENST00000485790 GIT2Q14161 759 aa15.4■□□□□ 0.06
SCAF4-206ENST00000485790 EPHA7Q15375 998 aa15.4■□□□□ 0.06
SCAF4-206ENST00000485790 TPRNQ4KMQ1 711 aa15.4■□□□□ 0.06
SCAF4-206ENST00000485790 CLLU1OSQ5K130 101 aa15.4■□□□□ 0.06
SCAF4-206ENST00000485790 CES5AQ6NT32 575 aa15.4■□□□□ 0.06
SCAF4-206ENST00000485790 PIK3AP1Q6ZUJ8 805 aa15.4■□□□□ 0.06
SCAF4-206ENST00000485790 ZNF598Q86UK7 904 aaKnown RBP15.4■□□□□ 0.06
SCAF4-206ENST00000485790 TCP11Q8WWU5 503 aa15.4■□□□□ 0.06
SCAF4-206ENST00000485790 TMEM169Q96HH4 297 aa15.4■□□□□ 0.06
SCAF4-206ENST00000485790 RPGRIP1Q96KN7 1286 aa15.4■□□□□ 0.06
SCAF4-206ENST00000485790 SH2D3AQ9BRG2 576 aa15.4■□□□□ 0.06
SCAF4-206ENST00000485790 ZSWIM4Q9H7M6 989 aa15.4■□□□□ 0.06
SCAF4-206ENST00000485790 ORC3Q9UBD5 711 aaPredicted RBP15.4■□□□□ 0.06
SCAF4-206ENST00000485790 MUTYHQ9UIF7 546 aa15.4■□□□□ 0.06
SCAF4-206ENST00000485790 PIN4Q9Y237 131 aaKnown RBP15.4■□□□□ 0.06
SCAF4-206ENST00000485790 PCDHGC5Q9Y5F6 944 aa15.4■□□□□ 0.06
SCAF4-206ENST00000485790 LOC730098B7Z3J9 87 aa15.39■□□□□ 0.05
SCAF4-206ENST00000485790 GAS2O43903 313 aaKnown RBP15.39■□□□□ 0.05
SCAF4-206ENST00000485790 SRGAP2CP0DJJ0 459 aa15.39■□□□□ 0.05
SCAF4-206ENST00000485790 CA8P35219 290 aa15.39■□□□□ 0.05
SCAF4-206ENST00000485790 BCAR1P56945 870 aa15.39■□□□□ 0.05
SCAF4-206ENST00000485790 DRP2Q13474 957 aa15.39■□□□□ 0.05
SCAF4-206ENST00000485790 NPY5RQ15761 445 aa15.39■□□□□ 0.05
SCAF4-206ENST00000485790 ANKRD54Q6NXT1 300 aa15.39■□□□□ 0.05
SCAF4-206ENST00000485790 SRGAP1Q7Z6B7 1085 aa15.39■□□□□ 0.05
SCAF4-206ENST00000485790 C4orf19Q8IY42 314 aa15.39■□□□□ 0.05
SCAF4-206ENST00000485790 PRPF31Q8WWY3 499 aaKnown RBP15.39■□□□□ 0.05
SCAF4-206ENST00000485790 PSPC1Q8WXF1 523 aaKnown RBP15.39■□□□□ 0.05
SCAF4-206ENST00000485790 CASP10Q92851 521 aa15.39■□□□□ 0.05
SCAF4-206ENST00000485790 NLRP4Q96MN2 994 aa15.39■□□□□ 0.05
SCAF4-206ENST00000485790 CEP89Q96ST8 783 aa15.39■□□□□ 0.05
SCAF4-206ENST00000485790 KCNMB3Q9NPA1 279 aa15.39■□□□□ 0.05
SCAF4-206ENST00000485790 RNF19AQ9NV58 838 aa15.39■□□□□ 0.05
SCAF4-206ENST00000485790 KANSL3Q9P2N6 904 aa15.39■□□□□ 0.05
SCAF4-206ENST00000485790 HCSTQ9UBK5 93 aa15.39■□□□□ 0.05
SCAF4-206ENST00000485790 TPCN1Q9ULQ1 816 aa15.39■□□□□ 0.05
SCAF4-206ENST00000485790 COL4A3BPQ9Y5P4 624 aa15.39■□□□□ 0.05
SCAF4-206ENST00000485790 STK36Q9NRP7 1315 aa15.39■□□□□ 0.05
SCAF4-206ENST00000485790 BRWD1Q9NSI6 2320 aa15.38■□□□□ 0.05
SCAF4-206ENST00000485790 TMEM150BA6NC51 233 aa15.38■□□□□ 0.05
SCAF4-206ENST00000485790 HIDE1A8MVS5 230 aa15.38■□□□□ 0.05
SCAF4-206ENST00000485790 EML1O00423 815 aa15.38■□□□□ 0.05
SCAF4-206ENST00000485790 SLC37A4O43826 429 aa15.38■□□□□ 0.05
SCAF4-206ENST00000485790 GLP2RO95838 553 aa15.38■□□□□ 0.05
SCAF4-206ENST00000485790 ALDH2P05091 517 aa15.38■□□□□ 0.05
SCAF4-206ENST00000485790 KRT2P35908 639 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms