RNA–Protein interactions for RNA: ENST00000485412.1

SQSTM1-208, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 656 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-208ENST00000485412 TCEAL9Q9UHQ7 104 aa15.63■□□□□ 0.09
SQSTM1-208ENST00000485412 HCFC2Q9Y5Z7 792 aa15.63■□□□□ 0.09
SQSTM1-208ENST00000485412 SPTBN4Q9H254 2564 aa15.63■□□□□ 0.09
SQSTM1-208ENST00000485412 CCDC196A0A1B0GTZ2 297 aa15.62■□□□□ 0.09
SQSTM1-208ENST00000485412 WDR64B1ANS9 1081 aa15.62■□□□□ 0.09
SQSTM1-208ENST00000485412 DTNBO60941 627 aa15.62■□□□□ 0.09
SQSTM1-208ENST00000485412 STBD1O95210 358 aa15.62■□□□□ 0.09
SQSTM1-208ENST00000485412 TDP2O95551 362 aa15.62■□□□□ 0.09
SQSTM1-208ENST00000485412 BRD1O95696 1058 aa15.62■□□□□ 0.09
SQSTM1-208ENST00000485412 EIF4BP23588 611 aaKnown RBP15.62■□□□□ 0.09
SQSTM1-208ENST00000485412 PDIA3P30101 505 aaKnown RBP15.62■□□□□ 0.09
SQSTM1-208ENST00000485412 MTHFRP42898 656 aa15.62■□□□□ 0.09
SQSTM1-208ENST00000485412 BMS1Q14692 1282 aaKnown RBP15.62■□□□□ 0.09
SQSTM1-208ENST00000485412 ASCL5Q7RTU5 278 aa15.62■□□□□ 0.09
SQSTM1-208ENST00000485412 ZNF598Q86UK7 904 aaKnown RBP15.62■□□□□ 0.09
SQSTM1-208ENST00000485412 TMEM105Q8N8V8 129 aa15.62■□□□□ 0.09
SQSTM1-208ENST00000485412 SLC5A5Q92911 643 aa15.62■□□□□ 0.09
SQSTM1-208ENST00000485412 CEP89Q96ST8 783 aa15.62■□□□□ 0.09
SQSTM1-208ENST00000485412 MFSD1Q9H3U5 465 aa15.62■□□□□ 0.09
SQSTM1-208ENST00000485412 ARID2Q68CP9 1835 aa15.61■□□□□ 0.09
SQSTM1-208ENST00000485412 PRR23AA6NEV1 266 aa15.61■□□□□ 0.09
SQSTM1-208ENST00000485412 MAGEB2O15479 319 aa15.61■□□□□ 0.09
SQSTM1-208ENST00000485412 DARSP14868 501 aaKnown RBP15.61■□□□□ 0.09
SQSTM1-208ENST00000485412 IFNAR1P17181 557 aa15.61■□□□□ 0.09
SQSTM1-208ENST00000485412 GNA11P29992 359 aa15.61■□□□□ 0.09
SQSTM1-208ENST00000485412 TARBP2Q15633 366 aaKnown RBP15.61■□□□□ 0.09
SQSTM1-208ENST00000485412 LONRF3Q496Y0 759 aa15.61■□□□□ 0.09
SQSTM1-208ENST00000485412 RARS2Q5T160 578 aaKnown RBP15.61■□□□□ 0.09
SQSTM1-208ENST00000485412 TMEM173Q86WV6 379 aaPredicted RBP15.61■□□□□ 0.09
SQSTM1-208ENST00000485412 TDRD5Q8NAT2 981 aaKnown RBP15.61■□□□□ 0.09
SQSTM1-208ENST00000485412 TMEM87AQ8NBN3 555 aa15.61■□□□□ 0.09
SQSTM1-208ENST00000485412 HELQQ8TDG4 1101 aa15.61■□□□□ 0.09
SQSTM1-208ENST00000485412 CCDC12Q8WUD4 166 aaPredicted RBP15.61■□□□□ 0.09
SQSTM1-208ENST00000485412 FAM167AQ96KS9 214 aa15.61■□□□□ 0.09
SQSTM1-208ENST00000485412 AIFM3Q96NN9 605 aa15.61■□□□□ 0.09
SQSTM1-208ENST00000485412 MAP7D2Q96T17 732 aa15.61■□□□□ 0.09
SQSTM1-208ENST00000485412 RNF26Q9BY78 433 aaPredicted RBP15.61■□□□□ 0.09
SQSTM1-208ENST00000485412 CEP131Q9UPN4 1083 aa15.61■□□□□ 0.09
SQSTM1-208ENST00000485412 FAM186AA6NE01 2351 aa15.61■□□□□ 0.09
SQSTM1-208ENST00000485412 C2orf71A6NGG8 1288 aa15.6■□□□□ 0.09
SQSTM1-208ENST00000485412 MEIS3P2A8K0S8 358 aa15.6■□□□□ 0.09
SQSTM1-208ENST00000485412 NT5C1B-RDH14C9J2C7 533 aa15.6■□□□□ 0.09
SQSTM1-208ENST00000485412 GAS7O60861 476 aa15.6■□□□□ 0.09
SQSTM1-208ENST00000485412 CLASP2O75122 1294 aaKnown RBP15.6■□□□□ 0.09
SQSTM1-208ENST00000485412 PSMD10O75832 226 aa15.6■□□□□ 0.09
SQSTM1-208ENST00000485412 ASGR2P07307 311 aa15.6■□□□□ 0.09
SQSTM1-208ENST00000485412 WEE2P0C1S8 567 aa15.6■□□□□ 0.09
SQSTM1-208ENST00000485412 NBL1P41271 181 aa15.6■□□□□ 0.09
SQSTM1-208ENST00000485412 TOB2Q14106 344 aaPredicted RBP15.6■□□□□ 0.09
SQSTM1-208ENST00000485412 NPY5RQ15761 445 aa15.6■□□□□ 0.09
SQSTM1-208ENST00000485412 LRCH2Q5VUJ6 765 aa15.6■□□□□ 0.09
SQSTM1-208ENST00000485412 ASTLQ6HA08 431 aaPredicted RBP15.6■□□□□ 0.09
SQSTM1-208ENST00000485412 SLC39A11Q8N1S5 342 aa15.6■□□□□ 0.09
SQSTM1-208ENST00000485412 FBXL16Q8N461 479 aa15.6■□□□□ 0.09
SQSTM1-208ENST00000485412 MRPL43Q8N983 215 aaKnown RBP15.6■□□□□ 0.09
SQSTM1-208ENST00000485412 TBCKQ8TEA7 893 aa15.6■□□□□ 0.09
SQSTM1-208ENST00000485412 SMOC2Q9H3U7 446 aa15.6■□□□□ 0.09
SQSTM1-208ENST00000485412 DBR1Q9UK59 544 aaKnown RBP15.6■□□□□ 0.09
SQSTM1-208ENST00000485412 DENND4AQ7Z401 1863 aa15.6■□□□□ 0.09
SQSTM1-208ENST00000485412 RIF1Q5UIP0 2472 aaKnown RBP15.6■□□□□ 0.09
SQSTM1-208ENST00000485412 C2orf16Q68DN1 1984 aa15.59■□□□□ 0.09
SQSTM1-208ENST00000485412 B4GALT3O60512 393 aa15.59■□□□□ 0.09
SQSTM1-208ENST00000485412 TMOD1P28289 359 aa15.59■□□□□ 0.09
SQSTM1-208ENST00000485412 AKAP17AQ02040 695 aaKnown RBP15.59■□□□□ 0.09
SQSTM1-208ENST00000485412 TBC1D8BQ0IIM8 1120 aa15.59■□□□□ 0.09
SQSTM1-208ENST00000485412 MTERF2Q49AM1 385 aa15.59■□□□□ 0.09
SQSTM1-208ENST00000485412 MCTP2Q6DN12 878 aa15.59■□□□□ 0.09
SQSTM1-208ENST00000485412 KANK3Q6NY19 840 aa15.59■□□□□ 0.09
SQSTM1-208ENST00000485412 B3GNT9Q6UX72 402 aa15.59■□□□□ 0.09
SQSTM1-208ENST00000485412 KSR1Q8IVT5 923 aa15.59■□□□□ 0.09
SQSTM1-208ENST00000485412 BCL7CQ8WUZ0 217 aaPredicted RBP15.59■□□□□ 0.09
SQSTM1-208ENST00000485412 NLRP7Q8WX94 980 aa15.59■□□□□ 0.09
SQSTM1-208ENST00000485412 AUTS2Q8WXX7 1259 aa15.59■□□□□ 0.09
SQSTM1-208ENST00000485412 LPPQ93052 612 aa15.59■□□□□ 0.09
SQSTM1-208ENST00000485412 TMEM169Q96HH4 297 aa15.59■□□□□ 0.09
SQSTM1-208ENST00000485412 SCLT1Q96NL6 688 aa15.59■□□□□ 0.09
SQSTM1-208ENST00000485412 RIT2Q99578 217 aa15.59■□□□□ 0.09
SQSTM1-208ENST00000485412 TEKT3Q9BXF9 490 aa15.59■□□□□ 0.09
SQSTM1-208ENST00000485412 DZANK1Q9NVP4 752 aa15.59■□□□□ 0.09
SQSTM1-208ENST00000485412 SEPT9Q9UHD8 586 aaPredicted RBP15.59■□□□□ 0.09
SQSTM1-208ENST00000485412 A0A0U1RQF3 1178 aa15.58■□□□□ 0.08
SQSTM1-208ENST00000485412 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.58■□□□□ 0.08
SQSTM1-208ENST00000485412 M0R2N6 131 aa15.58■□□□□ 0.08
SQSTM1-208ENST00000485412 CXCL14O95715 111 aa15.58■□□□□ 0.08
SQSTM1-208ENST00000485412 ALDH7A1P49419 539 aaKnown RBP15.58■□□□□ 0.08
SQSTM1-208ENST00000485412 EVCP57679 992 aa15.58■□□□□ 0.08
SQSTM1-208ENST00000485412 NLRP5P59047 1200 aa15.58■□□□□ 0.08
SQSTM1-208ENST00000485412 ATAT1Q5SQI0 421 aa15.58■□□□□ 0.08
SQSTM1-208ENST00000485412 KIAA1841Q6NSI8 718 aa15.58■□□□□ 0.08
SQSTM1-208ENST00000485412 MIER3Q7Z3K6 550 aa15.58■□□□□ 0.08
SQSTM1-208ENST00000485412 ZDHHC14Q8IZN3 488 aa15.58■□□□□ 0.08
SQSTM1-208ENST00000485412 PLCD3Q8N3E9 789 aa15.58■□□□□ 0.08
SQSTM1-208ENST00000485412 C12orf76Q8N812 135 aaPredicted RBP15.58■□□□□ 0.08
SQSTM1-208ENST00000485412 CCDC148Q8NFR7 591 aa15.58■□□□□ 0.08
SQSTM1-208ENST00000485412 BICD2Q8TD16 824 aa15.58■□□□□ 0.08
SQSTM1-208ENST00000485412 NKD2Q969F2 451 aaPredicted RBP15.58■□□□□ 0.08
SQSTM1-208ENST00000485412 MRPL9Q9BYD2 267 aaKnown RBP15.58■□□□□ 0.08
SQSTM1-208ENST00000485412 NRBP2Q9NSY0 501 aa15.58■□□□□ 0.08
SQSTM1-208ENST00000485412 LIMD1Q9UGP4 676 aa15.58■□□□□ 0.08
SQSTM1-208ENST00000485412 A0A087WZ62 844 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms