RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 KCNK18Q7Z418 384 aa19.74■□□□□ 0.75
SREBF1-213ENST00000485080 KRI1Q8N9T8 703 aaKnown RBP19.74■□□□□ 0.75
SREBF1-213ENST00000485080 SP7Q8TDD2 431 aaPredicted RBP19.74■□□□□ 0.75
SREBF1-213ENST00000485080 CALML4Q96GE6 196 aa19.74■□□□□ 0.75
SREBF1-213ENST00000485080 NLRP4Q96MN2 994 aa19.74■□□□□ 0.75
SREBF1-213ENST00000485080 TIPINQ9BVW5 301 aa19.74■□□□□ 0.75
SREBF1-213ENST00000485080 CSRNP2Q9H175 543 aa19.74■□□□□ 0.75
SREBF1-213ENST00000485080 SEMA6BQ9H3T3 888 aa19.74■□□□□ 0.75
SREBF1-213ENST00000485080 BMP2KQ9NSY1 1161 aaPredicted RBP19.74■□□□□ 0.75
SREBF1-213ENST00000485080 ZDHHC9Q9Y397 364 aa19.74■□□□□ 0.75
SREBF1-213ENST00000485080 INSL6Q9Y581 213 aa19.74■□□□□ 0.75
SREBF1-213ENST00000485080 COL4A6Q14031 1691 aa19.74■□□□□ 0.75
SREBF1-213ENST00000485080 C9IYK1 514 aa19.73■□□□□ 0.75
SREBF1-213ENST00000485080 E9PMD0 336 aa19.73■□□□□ 0.75
SREBF1-213ENST00000485080 RBAK-RBAKDNI3L0D1 243 aa19.73■□□□□ 0.75
SREBF1-213ENST00000485080 MGEA5O60502 916 aa19.73■□□□□ 0.75
SREBF1-213ENST00000485080 SRGAP2CP0DJJ0 459 aa19.73■□□□□ 0.75
SREBF1-213ENST00000485080 PHKA2P46019 1235 aa19.73■□□□□ 0.75
SREBF1-213ENST00000485080 CEBPZQ03701 1054 aaKnown RBP19.73■□□□□ 0.75
SREBF1-213ENST00000485080 SLC24A5Q71RS6 500 aa19.73■□□□□ 0.75
SREBF1-213ENST00000485080 NPAS4Q8IUM7 802 aa19.73■□□□□ 0.75
SREBF1-213ENST00000485080 SYT2Q8N9I0 419 aaPredicted RBP19.73■□□□□ 0.75
SREBF1-213ENST00000485080 RNF149Q8NC42 400 aa19.73■□□□□ 0.75
SREBF1-213ENST00000485080 ASAP3Q8TDY4 903 aa19.73■□□□□ 0.75
SREBF1-213ENST00000485080 KIFAP3Q92845 792 aa19.73■□□□□ 0.75
SREBF1-213ENST00000485080 CDK5RAP3Q96JB5 506 aa19.73■□□□□ 0.75
SREBF1-213ENST00000485080 ZNF668Q96K58 619 aaPredicted RBP19.73■□□□□ 0.75
SREBF1-213ENST00000485080 ADAM2Q99965 735 aa19.73■□□□□ 0.75
SREBF1-213ENST00000485080 ZBED2Q9BTP6 218 aa19.73■□□□□ 0.75
SREBF1-213ENST00000485080 POLR3FQ9H1D9 316 aaPredicted RBP19.73■□□□□ 0.75
SREBF1-213ENST00000485080 TTYH1Q9H313 450 aaPredicted RBP19.73■□□□□ 0.75
SREBF1-213ENST00000485080 KCND2Q9NZV8 630 aa19.73■□□□□ 0.75
SREBF1-213ENST00000485080 SPTLC2O15270 562 aa19.72■□□□□ 0.75
SREBF1-213ENST00000485080 MYOGP15173 224 aa19.72■□□□□ 0.75
SREBF1-213ENST00000485080 GUCY2CP25092 1073 aa19.72■□□□□ 0.75
SREBF1-213ENST00000485080 SARSP49591 514 aaKnown RBP19.72■□□□□ 0.75
SREBF1-213ENST00000485080 SLC12A3P55017 1021 aa19.72■□□□□ 0.75
SREBF1-213ENST00000485080 CAPSQ13938 189 aa19.72■□□□□ 0.75
SREBF1-213ENST00000485080 STK38Q15208 465 aa19.72■□□□□ 0.75
SREBF1-213ENST00000485080 RINT1Q6NUQ1 792 aa19.72■□□□□ 0.75
SREBF1-213ENST00000485080 C1orf186Q6ZWK4 172 aa19.72■□□□□ 0.75
SREBF1-213ENST00000485080 DEFB123Q8N688 67 aa19.72■□□□□ 0.75
SREBF1-213ENST00000485080 ZNF576Q9H609 170 aa19.72■□□□□ 0.75
SREBF1-213ENST00000485080 ELAC1Q9H777 363 aaKnown RBP19.72■□□□□ 0.75
SREBF1-213ENST00000485080 SLC28A3Q9HAS3 691 aa19.72■□□□□ 0.75
SREBF1-213ENST00000485080 RC3H2Q9HBD1 1191 aaKnown RBP19.72■□□□□ 0.75
SREBF1-213ENST00000485080 TFIP11Q9UBB9 837 aaKnown RBP19.72■□□□□ 0.75
SREBF1-213ENST00000485080 CFAP45Q9UL16 551 aa19.72■□□□□ 0.75
SREBF1-213ENST00000485080 DENND3A2RUS2 1198 aa19.71■□□□□ 0.75
SREBF1-213ENST00000485080 STAG3L1P0CL83 205 aa19.71■□□□□ 0.75
SREBF1-213ENST00000485080 ZSCAN20P17040 1043 aaPredicted RBP19.71■□□□□ 0.75
SREBF1-213ENST00000485080 FAM102BQ5T8I3 360 aa19.71■□□□□ 0.75
SREBF1-213ENST00000485080 FOXD4L5Q5VV16 416 aaPredicted RBP19.71■□□□□ 0.75
SREBF1-213ENST00000485080 CDCA2Q69YH5 1023 aaPredicted RBP19.71■□□□□ 0.75
SREBF1-213ENST00000485080 TMCO2Q7Z6W1 182 aaPredicted RBP19.71■□□□□ 0.75
SREBF1-213ENST00000485080 KCNG4Q8TDN1 519 aa19.71■□□□□ 0.75
SREBF1-213ENST00000485080 FOXD4L4Q8WXT5 416 aaPredicted RBP19.71■□□□□ 0.75
SREBF1-213ENST00000485080 NKX2-4Q9H2Z4 354 aa19.71■□□□□ 0.75
SREBF1-213ENST00000485080 MINDY3Q9H8M7 445 aa19.71■□□□□ 0.75
SREBF1-213ENST00000485080 GPRC5CQ9NQ84 441 aa19.71■□□□□ 0.75
SREBF1-213ENST00000485080 MTMR10Q9NXD2 777 aa19.71■□□□□ 0.75
SREBF1-213ENST00000485080 DACT1Q9NYF0 836 aa19.71■□□□□ 0.75
SREBF1-213ENST00000485080 DAXXQ9UER7 740 aaPredicted RBP19.71■□□□□ 0.75
SREBF1-213ENST00000485080 CSDE1O75534 798 aaKnown RBP19.7■□□□□ 0.74
SREBF1-213ENST00000485080 DGKIO75912 1065 aa19.7■□□□□ 0.74
SREBF1-213ENST00000485080 CA3P07451 260 aa19.7■□□□□ 0.74
SREBF1-213ENST00000485080 PLA2G4BP0C869 781 aa19.7■□□□□ 0.74
SREBF1-213ENST00000485080 DDIT3P35638 169 aa19.7■□□□□ 0.74
SREBF1-213ENST00000485080 NAMPTP43490 491 aa19.7■□□□□ 0.74
SREBF1-213ENST00000485080 PPP2R5AQ15172 486 aa19.7■□□□□ 0.74
SREBF1-213ENST00000485080 ZRSR1Q15695 479 aaKnown RBP19.7■□□□□ 0.74
SREBF1-213ENST00000485080 USP49Q70CQ1 688 aa19.7■□□□□ 0.74
SREBF1-213ENST00000485080 CATSPER4Q7RTX7 472 aa19.7■□□□□ 0.74
SREBF1-213ENST00000485080 SYMPKQ92797 1274 aaKnown RBP19.7■□□□□ 0.74
SREBF1-213ENST00000485080 ZNF689Q96CS4 500 aaPredicted RBP19.7■□□□□ 0.74
SREBF1-213ENST00000485080 EPSTI1Q96J88 318 aa19.7■□□□□ 0.74
SREBF1-213ENST00000485080 CLIC6Q96NY7 704 aa19.7■□□□□ 0.74
SREBF1-213ENST00000485080 C17orf75Q9HAS0 396 aa19.7■□□□□ 0.74
SREBF1-213ENST00000485080 BLOC1S4Q9NUP1 217 aa19.7■□□□□ 0.74
SREBF1-213ENST00000485080 AGPAT5Q9NUQ2 364 aa19.7■□□□□ 0.74
SREBF1-213ENST00000485080 RCOR1Q9UKL0 485 aa19.7■□□□□ 0.74
SREBF1-213ENST00000485080 A0A0U1RQF3 1178 aa19.69■□□□□ 0.74
SREBF1-213ENST00000485080 PLCG1P19174 1290 aa19.69■□□□□ 0.74
SREBF1-213ENST00000485080 FGFR4P22455 802 aa19.69■□□□□ 0.74
SREBF1-213ENST00000485080 HOXA11P31270 313 aaPredicted RBP19.69■□□□□ 0.74
SREBF1-213ENST00000485080 TXLNAP40222 546 aa19.69■□□□□ 0.74
SREBF1-213ENST00000485080 TAP1Q03518 808 aa19.69■□□□□ 0.74
SREBF1-213ENST00000485080 MBTD1Q05BQ5 628 aa19.69■□□□□ 0.74
SREBF1-213ENST00000485080 KARSQ15046 597 aaKnown RBP19.69■□□□□ 0.74
SREBF1-213ENST00000485080 PPP2R2DQ66LE6 453 aa19.69■□□□□ 0.74
SREBF1-213ENST00000485080 DAW1Q8N136 415 aa19.69■□□□□ 0.74
SREBF1-213ENST00000485080 LRRC15Q8TF66 581 aa19.69■□□□□ 0.74
SREBF1-213ENST00000485080 YME1L1Q96TA2 773 aa19.69■□□□□ 0.74
SREBF1-213ENST00000485080 RUSC1Q9BVN2 902 aa19.69■□□□□ 0.74
SREBF1-213ENST00000485080 C2orf40Q9H1Z8 148 aa19.69■□□□□ 0.74
SREBF1-213ENST00000485080 TMEM161AQ9NX61 479 aa19.69■□□□□ 0.74
SREBF1-213ENST00000485080 CCDC39Q9UFE4 941 aa19.69■□□□□ 0.74
SREBF1-213ENST00000485080 ATP6V1DQ9Y5K8 247 aa19.69■□□□□ 0.74
SREBF1-213ENST00000485080 LCHNA4D1U4 455 aa19.68■□□□□ 0.74
SREBF1-213ENST00000485080 ZNF623O75123 536 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms