RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 DOLKQ9UPQ8 538 aa5.93□□□□□ -1.46
CCDC39-205ENST00000485055 NID2Q14112 1375 aa5.93□□□□□ -1.46
CCDC39-205ENST00000485055 ANO9A1A5B4 782 aa5.93□□□□□ -1.46
CCDC39-205ENST00000485055 ZBED4O75132 1171 aa5.93□□□□□ -1.46
CCDC39-205ENST00000485055 CABYRO75952 493 aa5.93□□□□□ -1.46
CCDC39-205ENST00000485055 STAU1O95793 577 aaKnown RBP5.93□□□□□ -1.46
CCDC39-205ENST00000485055 ADORA2AP29274 412 aa5.93□□□□□ -1.46
CCDC39-205ENST00000485055 RCAN1P53805 252 aa5.93□□□□□ -1.46
CCDC39-205ENST00000485055 NRLP54845 237 aa5.93□□□□□ -1.46
CCDC39-205ENST00000485055 COX20Q5RI15 118 aa5.93□□□□□ -1.46
CCDC39-205ENST00000485055 RASIP1Q5U651 963 aa5.93□□□□□ -1.46
CCDC39-205ENST00000485055 KIAA0319Q5VV43 1072 aa5.93□□□□□ -1.46
CCDC39-205ENST00000485055 FAM186BQ8IYM0 893 aa5.93□□□□□ -1.46
CCDC39-205ENST00000485055 GJD3Q8N144 294 aa5.93□□□□□ -1.46
CCDC39-205ENST00000485055 FBXL16Q8N461 479 aa5.93□□□□□ -1.46
CCDC39-205ENST00000485055 LSMEM1Q8N8F7 131 aa5.93□□□□□ -1.46
CCDC39-205ENST00000485055 TNIP3Q96KP6 325 aa5.93□□□□□ -1.46
CCDC39-205ENST00000485055 CRBNQ96SW2 442 aa5.93□□□□□ -1.46
CCDC39-205ENST00000485055 TPCN1Q9ULQ1 816 aa5.93□□□□□ -1.46
CCDC39-205ENST00000485055 TACC3Q9Y6A5 838 aa5.93□□□□□ -1.46
CCDC39-205ENST00000485055 IKBKGQ9Y6K9 419 aa5.93□□□□□ -1.46
CCDC39-205ENST00000485055 MYH6P13533 1939 aa5.93□□□□□ -1.46
CCDC39-205ENST00000485055 M0R3H8 397 aa5.92□□□□□ -1.46
CCDC39-205ENST00000485055 NKRFO15226 690 aaKnown RBP eCLIP5.92□□□□□ -1.46
CCDC39-205ENST00000485055 DUSP11O75319 330 aaKnown RBP5.92□□□□□ -1.46
CCDC39-205ENST00000485055 ICAM1P05362 532 aa5.92□□□□□ -1.46
CCDC39-205ENST00000485055 PF4V1P10720 104 aa5.92□□□□□ -1.46
CCDC39-205ENST00000485055 HOXD8P13378 290 aaPredicted RBP5.92□□□□□ -1.46
CCDC39-205ENST00000485055 SDSP20132 328 aa5.92□□□□□ -1.46
CCDC39-205ENST00000485055 HOXD12P35452 270 aa5.92□□□□□ -1.46
CCDC39-205ENST00000485055 GCGRP47871 477 aa5.92□□□□□ -1.46
CCDC39-205ENST00000485055 MPP1Q00013 466 aa5.92□□□□□ -1.46
CCDC39-205ENST00000485055 RAB3GAP1Q15042 981 aa5.92□□□□□ -1.46
CCDC39-205ENST00000485055 ARHGAP29Q52LW3 1261 aa5.92□□□□□ -1.46
CCDC39-205ENST00000485055 PCNX4Q63HM2 1172 aa5.92□□□□□ -1.46
CCDC39-205ENST00000485055 CYP26C1Q6V0L0 522 aa5.92□□□□□ -1.46
CCDC39-205ENST00000485055 CCDC84Q86UT8 332 aaPredicted RBP5.92□□□□□ -1.46
CCDC39-205ENST00000485055 SESTD1Q86VW0 696 aa5.92□□□□□ -1.46
CCDC39-205ENST00000485055 ZNF444Q8N0Y2 327 aaPredicted RBP5.92□□□□□ -1.46
CCDC39-205ENST00000485055 DNERQ8NFT8 737 aa5.92□□□□□ -1.46
CCDC39-205ENST00000485055 SCG3Q8WXD2 468 aaKnown RBP5.92□□□□□ -1.46
CCDC39-205ENST00000485055 PLEKHA5Q9HAU0 1116 aa5.92□□□□□ -1.46
CCDC39-205ENST00000485055 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.92□□□□□ -1.46
CCDC39-205ENST00000485055 LRFN2Q9ULH4 789 aa5.92□□□□□ -1.46
CCDC39-205ENST00000485055 ASB14A6NK59 587 aa5.92□□□□□ -1.46
CCDC39-205ENST00000485055 H0YGN5 161 aa5.92□□□□□ -1.46
CCDC39-205ENST00000485055 CTAGE5O15320 804 aa5.92□□□□□ -1.46
CCDC39-205ENST00000485055 KPNA6O60684 536 aa5.92□□□□□ -1.46
CCDC39-205ENST00000485055 TFRCP02786 760 aaKnown RBP5.92□□□□□ -1.46
CCDC39-205ENST00000485055 HSPD1P10809 573 aaKnown RBP5.92□□□□□ -1.46
CCDC39-205ENST00000485055 BMP3P12645 472 aa5.92□□□□□ -1.46
CCDC39-205ENST00000485055 ELNP15502 786 aa5.92□□□□□ -1.46
CCDC39-205ENST00000485055 POLR2BP30876 1174 aaKnown RBP5.92□□□□□ -1.46
CCDC39-205ENST00000485055 ADCY1Q08828 1119 aa5.92□□□□□ -1.46
CCDC39-205ENST00000485055 TRAF1Q13077 416 aa5.92□□□□□ -1.46
CCDC39-205ENST00000485055 STAT4Q14765 748 aa5.92□□□□□ -1.46
CCDC39-205ENST00000485055 LLGL2Q6P1M3 1020 aa5.92□□□□□ -1.46
CCDC39-205ENST00000485055 SLC39A7Q92504 469 aa5.92□□□□□ -1.46
CCDC39-205ENST00000485055 ATG4CQ96DT6 458 aa5.92□□□□□ -1.46
CCDC39-205ENST00000485055 CEP95Q96GE4 821 aa5.92□□□□□ -1.46
CCDC39-205ENST00000485055 DEFB118Q96PH6 123 aa5.92□□□□□ -1.46
CCDC39-205ENST00000485055 MMP19Q99542 508 aa5.92□□□□□ -1.46
CCDC39-205ENST00000485055 ABHD16BQ9H3Z7 469 aa5.92□□□□□ -1.46
CCDC39-205ENST00000485055 VTA1Q9NP79 307 aa5.92□□□□□ -1.46
CCDC39-205ENST00000485055 LUC7LQ9NQ29 371 aaKnown RBP5.92□□□□□ -1.46
CCDC39-205ENST00000485055 STIM2Q9P246 746 aa5.92□□□□□ -1.46
CCDC39-205ENST00000485055 CTNNA3Q9UI47 895 aa5.92□□□□□ -1.46
CCDC39-205ENST00000485055 STRIP2Q9ULQ0 834 aa5.92□□□□□ -1.46
CCDC39-205ENST00000485055 MROH7Q68CQ1 1323 aa5.92□□□□□ -1.46
CCDC39-205ENST00000485055 RASA4O43374 803 aa5.92□□□□□ -1.46
CCDC39-205ENST00000485055 SNAI1O95863 264 aaPredicted RBP5.92□□□□□ -1.46
CCDC39-205ENST00000485055 CCND3P30281 292 aaPredicted RBP5.92□□□□□ -1.46
CCDC39-205ENST00000485055 TRPC1P48995 793 aa5.92□□□□□ -1.46
CCDC39-205ENST00000485055 EVX2Q03828 476 aa5.92□□□□□ -1.46
CCDC39-205ENST00000485055 ASIC2Q16515 512 aa5.92□□□□□ -1.46
CCDC39-205ENST00000485055 AKNAD1Q5T1N1 836 aa5.92□□□□□ -1.46
CCDC39-205ENST00000485055 IQSEC1Q6DN90 963 aa5.92□□□□□ -1.46
CCDC39-205ENST00000485055 SLC39A5Q6ZMH5 540 aa5.92□□□□□ -1.46
CCDC39-205ENST00000485055 CATSPER4Q7RTX7 472 aa5.92□□□□□ -1.46
CCDC39-205ENST00000485055 LRRTM3Q86VH5 581 aa5.92□□□□□ -1.46
CCDC39-205ENST00000485055 CARNMT1Q8N4J0 409 aa5.92□□□□□ -1.46
CCDC39-205ENST00000485055 NAT8LQ8N9F0 302 aa5.92□□□□□ -1.46
CCDC39-205ENST00000485055 SLC44A5Q8NCS7 719 aa5.92□□□□□ -1.46
CCDC39-205ENST00000485055 NUP133Q8WUM0 1156 aa5.92□□□□□ -1.46
CCDC39-205ENST00000485055 SLC7A3Q8WY07 619 aa5.92□□□□□ -1.46
CCDC39-205ENST00000485055 KCNK17Q96T54 332 aa5.92□□□□□ -1.46
CCDC39-205ENST00000485055 GTPBP4Q9BZE4 634 aaKnown RBP5.92□□□□□ -1.46
CCDC39-205ENST00000485055 TMEM134Q9H6X4 195 aa5.92□□□□□ -1.46
CCDC39-205ENST00000485055 RSAD1Q9HA92 442 aa5.92□□□□□ -1.46
CCDC39-205ENST00000485055 ACTR10Q9NZ32 417 aa5.92□□□□□ -1.46
CCDC39-205ENST00000485055 PLOD3O60568 738 aa5.91□□□□□ -1.46
CCDC39-205ENST00000485055 CPP00450 1065 aa5.91□□□□□ -1.46
CCDC39-205ENST00000485055 AKR1A1P14550 325 aa5.91□□□□□ -1.46
CCDC39-205ENST00000485055 ATF7P17544 494 aaPredicted RBP5.91□□□□□ -1.46
CCDC39-205ENST00000485055 ENPP1P22413 925 aa5.91□□□□□ -1.46
CCDC39-205ENST00000485055 L1CAMP32004 1257 aa5.91□□□□□ -1.46
CCDC39-205ENST00000485055 GBP2P32456 591 aaPredicted RBP5.91□□□□□ -1.46
CCDC39-205ENST00000485055 ID4P47928 161 aa5.91□□□□□ -1.46
CCDC39-205ENST00000485055 CD151P48509 253 aa5.91□□□□□ -1.46
CCDC39-205ENST00000485055 SMAD3P84022 425 aaKnown RBP5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms