RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 SPATA1Q5VX52 437 aa15.41■□□□□ 0.06
SMAD9-204ENST00000483941 IER5Q5VY09 327 aa15.41■□□□□ 0.06
SMAD9-204ENST00000483941 SLC39A5Q6ZMH5 540 aa15.41■□□□□ 0.06
SMAD9-204ENST00000483941 PPP4R3CPQ6ZMV5 832 aa15.41■□□□□ 0.06
SMAD9-204ENST00000483941 TRMT1LQ7Z2T5 733 aaKnown RBP15.41■□□□□ 0.06
SMAD9-204ENST00000483941 PCSK9Q8NBP7 692 aaKnown RBP15.41■□□□□ 0.06
SMAD9-204ENST00000483941 ARRDC4Q8NCT1 418 aa15.41■□□□□ 0.06
SMAD9-204ENST00000483941 ANKRD20A12PQ8NF67 263 aa15.41■□□□□ 0.06
SMAD9-204ENST00000483941 GOLGA5Q8TBA6 731 aa15.41■□□□□ 0.06
SMAD9-204ENST00000483941 SPIRE2Q8WWL2 714 aa15.41■□□□□ 0.06
SMAD9-204ENST00000483941 C16orf70Q9BSU1 422 aa15.41■□□□□ 0.06
SMAD9-204ENST00000483941 UPF3AQ9H1J1 476 aaKnown RBP15.41■□□□□ 0.06
SMAD9-204ENST00000483941 GDAQ9Y2T3 454 aa15.41■□□□□ 0.06
SMAD9-204ENST00000483941 ASAP2O43150 1006 aa15.4■□□□□ 0.06
SMAD9-204ENST00000483941 CCNE1P24864 410 aa15.4■□□□□ 0.06
SMAD9-204ENST00000483941 SNRPFP62306 86 aaKnown RBP15.4■□□□□ 0.06
SMAD9-204ENST00000483941 MXD4Q14582 209 aaPredicted RBP15.4■□□□□ 0.06
SMAD9-204ENST00000483941 SNX17Q15036 470 aa15.4■□□□□ 0.06
SMAD9-204ENST00000483941 IQCB1Q15051 598 aa15.4■□□□□ 0.06
SMAD9-204ENST00000483941 TJAP1Q5JTD0 557 aa15.4■□□□□ 0.06
SMAD9-204ENST00000483941 KLHL10Q6JEL2 608 aa15.4■□□□□ 0.06
SMAD9-204ENST00000483941 RNF180Q86T96 592 aa15.4■□□□□ 0.06
SMAD9-204ENST00000483941 SFR1Q86XK3 245 aa15.4■□□□□ 0.06
SMAD9-204ENST00000483941 ZNF710Q8N1W2 664 aa15.4■□□□□ 0.06
SMAD9-204ENST00000483941 AOPEPQ8N6M6 819 aa15.4■□□□□ 0.06
SMAD9-204ENST00000483941 NELFBQ8WX92 580 aa15.4■□□□□ 0.06
SMAD9-204ENST00000483941 HVCN1Q96D96 273 aa15.4■□□□□ 0.06
SMAD9-204ENST00000483941 NTPCRQ9BSD7 190 aaKnown RBP15.4■□□□□ 0.06
SMAD9-204ENST00000483941 ST6GALNAC4Q9H4F1 302 aa15.4■□□□□ 0.06
SMAD9-204ENST00000483941 TMEM206Q9H813 350 aa15.4■□□□□ 0.06
SMAD9-204ENST00000483941 EXOC7Q9UPT5 735 aa15.4■□□□□ 0.06
SMAD9-204ENST00000483941 TELO2Q9Y4R8 837 aa15.4■□□□□ 0.06
SMAD9-204ENST00000483941 SYNRGQ9UMZ2 1314 aa15.4■□□□□ 0.06
SMAD9-204ENST00000483941 CHD9Q3L8U1 2897 aa15.39■□□□□ 0.05
SMAD9-204ENST00000483941 MYH9P35579 1960 aaKnown RBP15.39■□□□□ 0.05
SMAD9-204ENST00000483941 TNFRSF10AO00220 468 aa15.39■□□□□ 0.05
SMAD9-204ENST00000483941 CABYRO75952 493 aa15.39■□□□□ 0.05
SMAD9-204ENST00000483941 GCNT3O95395 438 aa15.39■□□□□ 0.05
SMAD9-204ENST00000483941 F2P00734 622 aa15.39■□□□□ 0.05
SMAD9-204ENST00000483941 C6orf222P0C671 652 aaPredicted RBP15.39■□□□□ 0.05
SMAD9-204ENST00000483941 CACNB1Q02641 598 aaPredicted RBP15.39■□□□□ 0.05
SMAD9-204ENST00000483941 SPAG1Q07617 926 aa15.39■□□□□ 0.05
SMAD9-204ENST00000483941 HSP90AA2PQ14568 343 aaPredicted RBP15.39■□□□□ 0.05
SMAD9-204ENST00000483941 BMT2Q1RMZ1 405 aa15.39■□□□□ 0.05
SMAD9-204ENST00000483941 GNASQ5JWF2 1037 aa15.39■□□□□ 0.05
SMAD9-204ENST00000483941 TMEM63BQ5T3F8 832 aa15.39■□□□□ 0.05
SMAD9-204ENST00000483941 ZNF720Q7Z2F6 126 aa15.39■□□□□ 0.05
SMAD9-204ENST00000483941 LUZP1Q86V48 1076 aa15.39■□□□□ 0.05
SMAD9-204ENST00000483941 TRIM50Q86XT4 487 aa15.39■□□□□ 0.05
SMAD9-204ENST00000483941 FAM114A1Q8IWE2 563 aa15.39■□□□□ 0.05
SMAD9-204ENST00000483941 DHX40Q8IX18 779 aaKnown RBP15.39■□□□□ 0.05
SMAD9-204ENST00000483941 KIAA0895Q8NCT3 520 aa15.39■□□□□ 0.05
SMAD9-204ENST00000483941 P2RX5Q93086 422 aa15.39■□□□□ 0.05
SMAD9-204ENST00000483941 RNPC3Q96LT9 517 aaKnown RBP15.39■□□□□ 0.05
SMAD9-204ENST00000483941 MTG1Q9BT17 334 aaPredicted RBP15.39■□□□□ 0.05
SMAD9-204ENST00000483941 XPNPEP3Q9NQH7 507 aa15.39■□□□□ 0.05
SMAD9-204ENST00000483941 CGNQ9P2M7 1197 aaKnown RBP15.39■□□□□ 0.05
SMAD9-204ENST00000483941 CTNND2Q9UQB3 1225 aa15.39■□□□□ 0.05
SMAD9-204ENST00000483941 PCDHA2Q9Y5H9 948 aa15.39■□□□□ 0.05
SMAD9-204ENST00000483941 NRCAMQ92823 1304 aa15.39■□□□□ 0.05
SMAD9-204ENST00000483941 RSPH10B2B2RC85 870 aa15.38■□□□□ 0.05
SMAD9-204ENST00000483941 CALUO43852 315 aaPredicted RBP15.38■□□□□ 0.05
SMAD9-204ENST00000483941 MYCNP04198 464 aaPredicted RBP15.38■□□□□ 0.05
SMAD9-204ENST00000483941 RPLP2P05387 115 aaKnown RBP15.38■□□□□ 0.05
SMAD9-204ENST00000483941 TPM3P06753 285 aa15.38■□□□□ 0.05
SMAD9-204ENST00000483941 MYL3P08590 195 aa15.38■□□□□ 0.05
SMAD9-204ENST00000483941 RSPH10BP0C881 870 aa15.38■□□□□ 0.05
SMAD9-204ENST00000483941 INSRRP14616 1297 aa15.38■□□□□ 0.05
SMAD9-204ENST00000483941 CST5P28325 142 aaPredicted RBP15.38■□□□□ 0.05
SMAD9-204ENST00000483941 PPFIA1Q13136 1202 aa15.38■□□□□ 0.05
SMAD9-204ENST00000483941 TFDP1Q14186 410 aa15.38■□□□□ 0.05
SMAD9-204ENST00000483941 KNOP1Q1ED39 458 aaKnown RBP15.38■□□□□ 0.05
SMAD9-204ENST00000483941 CENPPQ6IPU0 288 aa15.38■□□□□ 0.05
SMAD9-204ENST00000483941 MAEAQ7L5Y9 396 aa15.38■□□□□ 0.05
SMAD9-204ENST00000483941 SMYD4Q8IYR2 804 aaPredicted RBP15.38■□□□□ 0.05
SMAD9-204ENST00000483941 USP38Q8NB14 1042 aa15.38■□□□□ 0.05
SMAD9-204ENST00000483941 ZNF507Q8TCN5 953 aa15.38■□□□□ 0.05
SMAD9-204ENST00000483941 PSPC1Q8WXF1 523 aaKnown RBP15.38■□□□□ 0.05
SMAD9-204ENST00000483941 KCNN1Q92952 543 aa15.38■□□□□ 0.05
SMAD9-204ENST00000483941 RNPEPQ9H4A4 650 aa15.38■□□□□ 0.05
SMAD9-204ENST00000483941 KMT5AQ9NQR1 393 aa15.38■□□□□ 0.05
SMAD9-204ENST00000483941 REV3LO60673 3130 aa15.37■□□□□ 0.05
SMAD9-204ENST00000483941 IGKV6-21A0A0C4DH24 114 aa15.37■□□□□ 0.05
SMAD9-204ENST00000483941 TMEM150BA6NC51 233 aa15.37■□□□□ 0.05
SMAD9-204ENST00000483941 TRIM43BA6NCK2 446 aa15.37■□□□□ 0.05
SMAD9-204ENST00000483941 CCDC169A6NNP5 214 aa15.37■□□□□ 0.05
SMAD9-204ENST00000483941 SFI1A8K8P3 1242 aa15.37■□□□□ 0.05
SMAD9-204ENST00000483941 K7ENM7 598 aa15.37■□□□□ 0.05
SMAD9-204ENST00000483941 ADCY6O43306 1168 aa15.37■□□□□ 0.05
SMAD9-204ENST00000483941 ZNF286BP0CG31 522 aa15.37■□□□□ 0.05
SMAD9-204ENST00000483941 PRKCSHP14314 528 aaPredicted RBP15.37■□□□□ 0.05
SMAD9-204ENST00000483941 CD44P16070 742 aaKnown RBP15.37■□□□□ 0.05
SMAD9-204ENST00000483941 CDK11BP21127 795 aaKnown RBP15.37■□□□□ 0.05
SMAD9-204ENST00000483941 RPL13P26373 211 aaKnown RBP15.37■□□□□ 0.05
SMAD9-204ENST00000483941 ARL2P36404 184 aa15.37■□□□□ 0.05
SMAD9-204ENST00000483941 NAMPTP43490 491 aa15.37■□□□□ 0.05
SMAD9-204ENST00000483941 PSEN2P49810 448 aa15.37■□□□□ 0.05
SMAD9-204ENST00000483941 PEX3P56589 373 aa15.37■□□□□ 0.05
SMAD9-204ENST00000483941 MAPK7Q13164 816 aa15.37■□□□□ 0.05
SMAD9-204ENST00000483941 MFSD10Q14728 455 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms