RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 SOWAHDA6NJG2 315 aa15.39■□□□□ 0.05
CLK3-204ENST00000483723 EPHB6O15197 1021 aa15.39■□□□□ 0.05
CLK3-204ENST00000483723 MAPK13O15264 365 aa15.39■□□□□ 0.05
CLK3-204ENST00000483723 ZSCAN12O43309 604 aa15.39■□□□□ 0.05
CLK3-204ENST00000483723 NOL4O94818 638 aa15.39■□□□□ 0.05
CLK3-204ENST00000483723 AFPP02771 609 aaKnown RBP15.39■□□□□ 0.05
CLK3-204ENST00000483723 XRCC5P13010 732 aaKnown RBP15.39■□□□□ 0.05
CLK3-204ENST00000483723 ABCD1P33897 745 aa15.39■□□□□ 0.05
CLK3-204ENST00000483723 SLC26A2P50443 739 aa15.39■□□□□ 0.05
CLK3-204ENST00000483723 SOX10P56693 466 aa15.39■□□□□ 0.05
CLK3-204ENST00000483723 ARHGAP1Q07960 439 aa15.39■□□□□ 0.05
CLK3-204ENST00000483723 LAMC2Q13753 1193 aa15.39■□□□□ 0.05
CLK3-204ENST00000483723 MORN1Q5T089 497 aa15.39■□□□□ 0.05
CLK3-204ENST00000483723 MAP4K3Q8IVH8 894 aa15.39■□□□□ 0.05
CLK3-204ENST00000483723 MSL3Q8N5Y2 521 aaKnown RBP15.39■□□□□ 0.05
CLK3-204ENST00000483723 COPS5Q92905 334 aa15.39■□□□□ 0.05
CLK3-204ENST00000483723 EMID1Q96A84 441 aaPredicted RBP15.39■□□□□ 0.05
CLK3-204ENST00000483723 MAML3Q96JK9 1138 aa15.39■□□□□ 0.05
CLK3-204ENST00000483723 PCMTD1Q96MG8 357 aaPredicted RBP15.39■□□□□ 0.05
CLK3-204ENST00000483723 SPATA33Q96N06 139 aa15.39■□□□□ 0.05
CLK3-204ENST00000483723 POLR3FQ9H1D9 316 aaPredicted RBP15.39■□□□□ 0.05
CLK3-204ENST00000483723 AZI2Q9H6S1 392 aa15.39■□□□□ 0.05
CLK3-204ENST00000483723 MMRN2Q9H8L6 949 aa15.39■□□□□ 0.05
CLK3-204ENST00000483723 ARHGAP28Q9P2N2 729 aa15.39■□□□□ 0.05
CLK3-204ENST00000483723 EXOC7Q9UPT5 735 aa15.39■□□□□ 0.05
CLK3-204ENST00000483723 PPP2R2CQ9Y2T4 447 aa15.39■□□□□ 0.05
CLK3-204ENST00000483723 TLL2Q9Y6L7 1015 aa15.39■□□□□ 0.05
CLK3-204ENST00000483723 GTPBP10A4D1E9 387 aaKnown RBP15.38■□□□□ 0.05
CLK3-204ENST00000483723 CCDC169A6NNP5 214 aa15.38■□□□□ 0.05
CLK3-204ENST00000483723 FAM155AB1AL88 458 aaPredicted RBP15.38■□□□□ 0.05
CLK3-204ENST00000483723 H0YCG3 227 aa15.38■□□□□ 0.05
CLK3-204ENST00000483723 MAFO75444 373 aaPredicted RBP15.38■□□□□ 0.05
CLK3-204ENST00000483723 TOMM70O94826 608 aa15.38■□□□□ 0.05
CLK3-204ENST00000483723 TUBB4AP04350 444 aa15.38■□□□□ 0.05
CLK3-204ENST00000483723 POLGP54098 1239 aaPredicted RBP15.38■□□□□ 0.05
CLK3-204ENST00000483723 MTF1Q14872 753 aa15.38■□□□□ 0.05
CLK3-204ENST00000483723 PPP2R5AQ15172 486 aa15.38■□□□□ 0.05
CLK3-204ENST00000483723 C17orf99Q6UX52 265 aa15.38■□□□□ 0.05
CLK3-204ENST00000483723 TOGARAM2Q6ZUX3 1019 aa15.38■□□□□ 0.05
CLK3-204ENST00000483723 DPP9Q86TI2 863 aa15.38■□□□□ 0.05
CLK3-204ENST00000483723 IFNL1Q8IU54 200 aa15.38■□□□□ 0.05
CLK3-204ENST00000483723 ZNF397Q8NF99 534 aaPredicted RBP15.38■□□□□ 0.05
CLK3-204ENST00000483723 BAP1Q92560 729 aa15.38■□□□□ 0.05
CLK3-204ENST00000483723 IFT74Q96LB3 600 aa15.38■□□□□ 0.05
CLK3-204ENST00000483723 CHP1Q99653 195 aa15.38■□□□□ 0.05
CLK3-204ENST00000483723 PLAGL2Q9UPG8 496 aa15.38■□□□□ 0.05
CLK3-204ENST00000483723 ADGRG1Q9Y653 693 aa15.38■□□□□ 0.05
CLK3-204ENST00000483723 DENND3A2RUS2 1198 aa15.37■□□□□ 0.05
CLK3-204ENST00000483723 NOP56O00567 594 aaKnown RBP15.37■□□□□ 0.05
CLK3-204ENST00000483723 TNNT1P13805 278 aa15.37■□□□□ 0.05
CLK3-204ENST00000483723 IRF5Q13568 498 aa15.37■□□□□ 0.05
CLK3-204ENST00000483723 PTPN14Q15678 1187 aa15.37■□□□□ 0.05
CLK3-204ENST00000483723 TSR1Q2NL82 804 aaKnown RBP15.37■□□□□ 0.05
CLK3-204ENST00000483723 NEK11Q8NG66 645 aa15.37■□□□□ 0.05
CLK3-204ENST00000483723 NPLOC4Q8TAT6 608 aa15.37■□□□□ 0.05
CLK3-204ENST00000483723 ATP8B4Q8TF62 1192 aa15.37■□□□□ 0.05
CLK3-204ENST00000483723 C16orf45Q96MC5 204 aaPredicted RBP15.37■□□□□ 0.05
CLK3-204ENST00000483723 SMARCAD1Q9H4L7 1026 aa15.37■□□□□ 0.05
CLK3-204ENST00000483723 PLCB1Q9NQ66 1216 aa15.37■□□□□ 0.05
CLK3-204ENST00000483723 CPA4Q9UI42 421 aa15.37■□□□□ 0.05
CLK3-204ENST00000483723 FRMD4BQ9Y2L6 1034 aa15.37■□□□□ 0.05
CLK3-204ENST00000483723 ADGRA3Q8IWK6 1321 aa15.37■□□□□ 0.05
CLK3-204ENST00000483723 SIP14410 1827 aa15.37■□□□□ 0.05
CLK3-204ENST00000483723 IGKV6-21A0A0C4DH24 114 aa15.37■□□□□ 0.05
CLK3-204ENST00000483723 GOLGA6L9A6NEM1 432 aa15.37■□□□□ 0.05
CLK3-204ENST00000483723 KIF2AO00139 706 aaPredicted RBP15.37■□□□□ 0.05
CLK3-204ENST00000483723 GH1P01241 217 aa15.37■□□□□ 0.05
CLK3-204ENST00000483723 CYP2J2P51589 502 aa15.37■□□□□ 0.05
CLK3-204ENST00000483723 PLCB4Q15147 1175 aa15.37■□□□□ 0.05
CLK3-204ENST00000483723 TAF1CQ15572 869 aaPredicted RBP15.37■□□□□ 0.05
CLK3-204ENST00000483723 DNTTIP2Q5QJE6 756 aaKnown RBP15.37■□□□□ 0.05
CLK3-204ENST00000483723 TAS1R3Q7RTX0 852 aa15.37■□□□□ 0.05
CLK3-204ENST00000483723 EXOC8Q8IYI6 725 aa15.37■□□□□ 0.05
CLK3-204ENST00000483723 SLC7A3Q8WY07 619 aa15.37■□□□□ 0.05
CLK3-204ENST00000483723 CCDC102AQ96A19 550 aa15.37■□□□□ 0.05
CLK3-204ENST00000483723 TINF2Q9BSI4 451 aa15.37■□□□□ 0.05
CLK3-204ENST00000483723 FAM207AQ9NSI2 230 aaPredicted RBP15.37■□□□□ 0.05
CLK3-204ENST00000483723 CEP72Q9P209 647 aa15.37■□□□□ 0.05
CLK3-204ENST00000483723 ZBTB42B2RXF5 422 aa15.36■□□□□ 0.05
CLK3-204ENST00000483723 ANKRD63C9JTQ0 380 aa15.36■□□□□ 0.05
CLK3-204ENST00000483723 TLR2O60603 784 aa15.36■□□□□ 0.05
CLK3-204ENST00000483723 EXOC3O60645 756 aa15.36■□□□□ 0.05
CLK3-204ENST00000483723 HOXC6P09630 235 aa15.36■□□□□ 0.05
CLK3-204ENST00000483723 GLRA2P23416 452 aa15.36■□□□□ 0.05
CLK3-204ENST00000483723 CNGA1P29973 690 aa15.36■□□□□ 0.05
CLK3-204ENST00000483723 ADSSP30520 456 aa15.36■□□□□ 0.05
CLK3-204ENST00000483723 NAMPTP43490 491 aa15.36■□□□□ 0.05
CLK3-204ENST00000483723 TERF1P54274 439 aa15.36■□□□□ 0.05
CLK3-204ENST00000483723 BRDTQ58F21 947 aaPredicted RBP15.36■□□□□ 0.05
CLK3-204ENST00000483723 XXYLT1Q8NBI6 393 aa15.36■□□□□ 0.05
CLK3-204ENST00000483723 ASAP3Q8TDY4 903 aa15.36■□□□□ 0.05
CLK3-204ENST00000483723 USP6NLQ92738 828 aa15.36■□□□□ 0.05
CLK3-204ENST00000483723 SYN2Q92777 582 aaPredicted RBP15.36■□□□□ 0.05
CLK3-204ENST00000483723 GLG1Q92896 1179 aa15.36■□□□□ 0.05
CLK3-204ENST00000483723 TMEM143Q96AN5 459 aa15.36■□□□□ 0.05
CLK3-204ENST00000483723 HHIPL1Q96JK4 782 aa15.36■□□□□ 0.05
CLK3-204ENST00000483723 CBWD1Q9BRT8 395 aa15.36■□□□□ 0.05
CLK3-204ENST00000483723 KIFC3Q9BVG8 833 aa15.36■□□□□ 0.05
CLK3-204ENST00000483723 GANQ9H2C0 597 aa15.36■□□□□ 0.05
CLK3-204ENST00000483723 ABHD16BQ9H3Z7 469 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms