RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 TBX20Q9UMR3 447 aa11.11□□□□□ -0.63
HDAC6-226ENST00000483656 TRPC6Q9Y210 931 aa11.11□□□□□ -0.63
HDAC6-226ENST00000483656 PCNTO95613 3336 aa11.1□□□□□ -0.63
HDAC6-226ENST00000483656 DENND3A2RUS2 1198 aa11.1□□□□□ -0.63
HDAC6-226ENST00000483656 MYADML2A6NDP7 307 aa11.1□□□□□ -0.63
HDAC6-226ENST00000483656 LGALS16A8MUM7 142 aa11.1□□□□□ -0.63
HDAC6-226ENST00000483656 TISP43B9A030 160 aa11.1□□□□□ -0.63
HDAC6-226ENST00000483656 N4BP3O15049 544 aa11.1□□□□□ -0.63
HDAC6-226ENST00000483656 DUSP11O75319 330 aaKnown RBP11.1□□□□□ -0.63
HDAC6-226ENST00000483656 FGFR1OPO95684 399 aaKnown RBP11.1□□□□□ -0.63
HDAC6-226ENST00000483656 AKR1A1P14550 325 aa11.1□□□□□ -0.63
HDAC6-226ENST00000483656 NR2F2P24468 414 aa11.1□□□□□ -0.63
HDAC6-226ENST00000483656 CASP4P49662 377 aa11.1□□□□□ -0.63
HDAC6-226ENST00000483656 SMTNP53814 917 aa11.1□□□□□ -0.63
HDAC6-226ENST00000483656 MARSP56192 900 aaKnown RBP11.1□□□□□ -0.63
HDAC6-226ENST00000483656 BEX3Q00994 111 aa11.1□□□□□ -0.63
HDAC6-226ENST00000483656 TBX2Q13207 712 aaPredicted RBP11.1□□□□□ -0.63
HDAC6-226ENST00000483656 CAPSQ13938 189 aa11.1□□□□□ -0.63
HDAC6-226ENST00000483656 IER5Q5VY09 327 aa11.1□□□□□ -0.63
HDAC6-226ENST00000483656 CCDC186Q7Z3E2 898 aa11.1□□□□□ -0.63
HDAC6-226ENST00000483656 TMC6Q7Z403 805 aa11.1□□□□□ -0.63
HDAC6-226ENST00000483656 CREBRFQ8IUR6 639 aa11.1□□□□□ -0.63
HDAC6-226ENST00000483656 MAP4K3Q8IVH8 894 aa11.1□□□□□ -0.63
HDAC6-226ENST00000483656 DRC7Q8IY82 874 aa11.1□□□□□ -0.63
HDAC6-226ENST00000483656 LRRC71Q8N4P6 559 aa11.1□□□□□ -0.63
HDAC6-226ENST00000483656 SLC17A8Q8NDX2 589 aa11.1□□□□□ -0.63
HDAC6-226ENST00000483656 PRPF31Q8WWY3 499 aaKnown RBP11.1□□□□□ -0.63
HDAC6-226ENST00000483656 HVCN1Q96D96 273 aa11.1□□□□□ -0.63
HDAC6-226ENST00000483656 IFT74Q96LB3 600 aa11.1□□□□□ -0.63
HDAC6-226ENST00000483656 TUBGCP2Q9BSJ2 902 aa11.1□□□□□ -0.63
HDAC6-226ENST00000483656 AP5M1Q9H0R1 490 aa11.1□□□□□ -0.63
HDAC6-226ENST00000483656 GBP3Q9H0R5 595 aa11.1□□□□□ -0.63
HDAC6-226ENST00000483656 TMEM206Q9H813 350 aa11.1□□□□□ -0.63
HDAC6-226ENST00000483656 SAGE1Q9NXZ1 904 aa11.1□□□□□ -0.63
HDAC6-226ENST00000483656 MAGEC2Q9UBF1 373 aaPredicted RBP11.1□□□□□ -0.63
HDAC6-226ENST00000483656 CASP8AP2Q9UKL3 1982 aa11.09□□□□□ -0.63
HDAC6-226ENST00000483656 COL1A2P08123 1366 aa11.09□□□□□ -0.63
HDAC6-226ENST00000483656 ANKRD63C9JTQ0 380 aa11.09□□□□□ -0.63
HDAC6-226ENST00000483656 HAS3O00219 553 aa11.09□□□□□ -0.63
HDAC6-226ENST00000483656 CETN3O15182 167 aa11.09□□□□□ -0.63
HDAC6-226ENST00000483656 FKTNO75072 461 aa11.09□□□□□ -0.63
HDAC6-226ENST00000483656 AKAP3O75969 853 aa11.09□□□□□ -0.63
HDAC6-226ENST00000483656 F2P00734 622 aa11.09□□□□□ -0.63
HDAC6-226ENST00000483656 EDN1P05305 212 aa11.09□□□□□ -0.63
HDAC6-226ENST00000483656 KLRC1P26715 233 aa11.09□□□□□ -0.63
HDAC6-226ENST00000483656 CCND3P30281 292 aaPredicted RBP11.09□□□□□ -0.63
HDAC6-226ENST00000483656 NAMPTP43490 491 aa11.09□□□□□ -0.63
HDAC6-226ENST00000483656 MTIF2P46199 727 aaKnown RBP11.09□□□□□ -0.63
HDAC6-226ENST00000483656 GJA9P57773 515 aa11.09□□□□□ -0.63
HDAC6-226ENST00000483656 IGBP1P78318 339 aa11.09□□□□□ -0.63
HDAC6-226ENST00000483656 NKX3-2P78367 333 aa11.09□□□□□ -0.63
HDAC6-226ENST00000483656 HIC1Q14526 733 aa11.09□□□□□ -0.63
HDAC6-226ENST00000483656 ARID5BQ14865 1188 aa11.09□□□□□ -0.63
HDAC6-226ENST00000483656 FILIP1LQ4L180 1135 aa11.09□□□□□ -0.63
HDAC6-226ENST00000483656 MARCH8Q5T0T0 291 aa11.09□□□□□ -0.63
HDAC6-226ENST00000483656 MAP3K21Q5TCX8 1036 aa11.09□□□□□ -0.63
HDAC6-226ENST00000483656 EFCAB12Q6NXP0 572 aa11.09□□□□□ -0.63
HDAC6-226ENST00000483656 SLC39A4Q6P5W5 647 aa11.09□□□□□ -0.63
HDAC6-226ENST00000483656 SLC9A9Q8IVB4 645 aa11.09□□□□□ -0.63
HDAC6-226ENST00000483656 TRIM59Q8IWR1 403 aa11.09□□□□□ -0.63
HDAC6-226ENST00000483656 C12orf56Q8IXR9 622 aa11.09□□□□□ -0.63
HDAC6-226ENST00000483656 ANKRD20A12PQ8NF67 263 aa11.09□□□□□ -0.63
HDAC6-226ENST00000483656 ZNF296Q8WUU4 475 aaPredicted RBP11.09□□□□□ -0.63
HDAC6-226ENST00000483656 TMEM174Q8WUU8 243 aa11.09□□□□□ -0.63
HDAC6-226ENST00000483656 BORCS6Q96GS4 357 aa11.09□□□□□ -0.63
HDAC6-226ENST00000483656 UPF3AQ9H1J1 476 aaKnown RBP11.09□□□□□ -0.63
HDAC6-226ENST00000483656 SUGCTQ9HAC7 445 aa11.09□□□□□ -0.63
HDAC6-226ENST00000483656 SUCLA2Q9P2R7 463 aaPredicted RBP11.09□□□□□ -0.63
HDAC6-226ENST00000483656 ZNF215Q9UL58 517 aaPredicted RBP11.09□□□□□ -0.63
HDAC6-226ENST00000483656 SEPT4O43236 478 aa11.08□□□□□ -0.64
HDAC6-226ENST00000483656 GAS2O43903 313 aaKnown RBP11.08□□□□□ -0.64
HDAC6-226ENST00000483656 ADCY3O60266 1144 aa11.08□□□□□ -0.64
HDAC6-226ENST00000483656 GNA14O95837 355 aa11.08□□□□□ -0.64
HDAC6-226ENST00000483656 PTMAP06454 111 aaKnown RBP11.08□□□□□ -0.64
HDAC6-226ENST00000483656 GJB1P08034 283 aa11.08□□□□□ -0.64
HDAC6-226ENST00000483656 MYL3P08590 195 aa11.08□□□□□ -0.64
HDAC6-226ENST00000483656 PRKAR2AP13861 404 aaKnown RBP11.08□□□□□ -0.64
HDAC6-226ENST00000483656 RPL13P26373 211 aaKnown RBP11.08□□□□□ -0.64
HDAC6-226ENST00000483656 HOXD10P28358 340 aa11.08□□□□□ -0.64
HDAC6-226ENST00000483656 ADSSP30520 456 aa11.08□□□□□ -0.64
HDAC6-226ENST00000483656 PSEN2P49810 448 aa11.08□□□□□ -0.64
HDAC6-226ENST00000483656 CPT1AP50416 773 aa11.08□□□□□ -0.64
HDAC6-226ENST00000483656 CLCN3P51790 818 aa11.08□□□□□ -0.64
HDAC6-226ENST00000483656 LAMTOR4Q0VGL1 99 aa11.08□□□□□ -0.64
HDAC6-226ENST00000483656 PPFIA1Q13136 1202 aa11.08□□□□□ -0.64
HDAC6-226ENST00000483656 MYBPC2Q14324 1141 aa11.08□□□□□ -0.64
HDAC6-226ENST00000483656 PPP2R5AQ15172 486 aa11.08□□□□□ -0.64
HDAC6-226ENST00000483656 GRIK4Q16099 956 aa11.08□□□□□ -0.64
HDAC6-226ENST00000483656 FSCN1Q16658 493 aaKnown RBP11.08□□□□□ -0.64
HDAC6-226ENST00000483656 MAN2A1Q16706 1144 aa11.08□□□□□ -0.64
HDAC6-226ENST00000483656 VWA3BQ502W6 1294 aa11.08□□□□□ -0.64
HDAC6-226ENST00000483656 HS1BP3Q53T59 392 aa11.08□□□□□ -0.64
HDAC6-226ENST00000483656 MTHFD1LQ6UB35 978 aa11.08□□□□□ -0.64
HDAC6-226ENST00000483656 HS2ST1Q7LGA3 356 aa11.08□□□□□ -0.64
HDAC6-226ENST00000483656 FRMD5Q7Z6J6 570 aa11.08□□□□□ -0.64
HDAC6-226ENST00000483656 EXOC8Q8IYI6 725 aa11.08□□□□□ -0.64
HDAC6-226ENST00000483656 SYCP3Q8IZU3 236 aa11.08□□□□□ -0.64
HDAC6-226ENST00000483656 ZSWIM2Q8NEG5 633 aa11.08□□□□□ -0.64
HDAC6-226ENST00000483656 GOLGA5Q8TBA6 731 aa11.08□□□□□ -0.64
HDAC6-226ENST00000483656 PPP1R13LQ8WUF5 828 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms