RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 THNSL1Q8IYQ7 743 aa22.22■■□□□ 1.15
HPS4-213ENST00000483631 CDCA3Q99618 268 aaPredicted RBP22.22■■□□□ 1.15
HPS4-213ENST00000483631 FDXACB1Q9BRP7 624 aaPredicted RBP22.22■■□□□ 1.15
HPS4-213ENST00000483631 LXNQ9BS40 222 aa22.22■■□□□ 1.15
HPS4-213ENST00000483631 MRPL9Q9BYD2 267 aaKnown RBP22.22■■□□□ 1.15
HPS4-213ENST00000483631 ZSWIM4Q9H7M6 989 aa22.22■■□□□ 1.15
HPS4-213ENST00000483631 ARID2Q68CP9 1835 aa22.22■■□□□ 1.15
HPS4-213ENST00000483631 IRS1P35568 1242 aa22.21■■□□□ 1.15
HPS4-213ENST00000483631 SMAD4Q13485 552 aaKnown RBP22.21■■□□□ 1.15
HPS4-213ENST00000483631 SMAD2Q15796 467 aaKnown RBP22.21■■□□□ 1.15
HPS4-213ENST00000483631 ZNF668Q96K58 619 aaPredicted RBP22.21■■□□□ 1.15
HPS4-213ENST00000483631 CEP170P1Q96L14 293 aa22.21■■□□□ 1.15
HPS4-213ENST00000483631 SH2D3AQ9BRG2 576 aa22.21■■□□□ 1.15
HPS4-213ENST00000483631 CD320Q9NPF0 282 aa22.21■■□□□ 1.15
HPS4-213ENST00000483631 PUF60Q9UHX1 559 aaKnown RBP22.21■■□□□ 1.15
HPS4-213ENST00000483631 PI4K2BG5E9Z4 385 aa22.2■■□□□ 1.14
HPS4-213ENST00000483631 ASAP2O43150 1006 aa22.2■■□□□ 1.14
HPS4-213ENST00000483631 TBX10O75333 385 aa22.2■■□□□ 1.14
HPS4-213ENST00000483631 YWHABP31946 246 aaKnown RBP22.2■■□□□ 1.14
HPS4-213ENST00000483631 RAB27AP51159 221 aa22.2■■□□□ 1.14
HPS4-213ENST00000483631 POLGP54098 1239 aaPredicted RBP22.2■■□□□ 1.14
HPS4-213ENST00000483631 DLX2Q07687 328 aaPredicted RBP22.2■■□□□ 1.14
HPS4-213ENST00000483631 PLA2G4FQ68DD2 849 aa22.2■■□□□ 1.14
HPS4-213ENST00000483631 DIS3L2Q8IYB7 885 aaKnown RBP22.2■■□□□ 1.14
HPS4-213ENST00000483631 TCP11Q8WWU5 503 aa22.2■■□□□ 1.14
HPS4-213ENST00000483631 MRPS27Q92552 414 aaKnown RBP22.2■■□□□ 1.14
HPS4-213ENST00000483631 IGFLR1Q9H665 355 aa22.2■■□□□ 1.14
HPS4-213ENST00000483631 WRAP73Q9P2S5 460 aaPredicted RBP22.2■■□□□ 1.14
HPS4-213ENST00000483631 CD207Q9UJ71 328 aa22.2■■□□□ 1.14
HPS4-213ENST00000483631 PCDHA12Q9UN75 941 aa22.2■■□□□ 1.14
HPS4-213ENST00000483631 COL4A3BPQ9Y5P4 624 aa22.2■■□□□ 1.14
HPS4-213ENST00000483631 C19orf67A6NJJ6 358 aa22.19■■□□□ 1.14
HPS4-213ENST00000483631 BTBD18B2RXH4 712 aa22.19■■□□□ 1.14
HPS4-213ENST00000483631 FSCN2O14926 492 aa22.19■■□□□ 1.14
HPS4-213ENST00000483631 MBTPS2O43462 519 aa22.19■■□□□ 1.14
HPS4-213ENST00000483631 ZNF623O75123 536 aa22.19■■□□□ 1.14
HPS4-213ENST00000483631 LYPLA2O95372 231 aa22.19■■□□□ 1.14
HPS4-213ENST00000483631 EYA4O95677 639 aa22.19■■□□□ 1.14
HPS4-213ENST00000483631 ATF7P17544 494 aaPredicted RBP22.19■■□□□ 1.14
HPS4-213ENST00000483631 FGFR4P22455 802 aa22.19■■□□□ 1.14
HPS4-213ENST00000483631 PHKA2P46019 1235 aa22.19■■□□□ 1.14
HPS4-213ENST00000483631 NPEPPSP55786 919 aa22.19■■□□□ 1.14
HPS4-213ENST00000483631 ZP2Q05996 745 aa22.19■■□□□ 1.14
HPS4-213ENST00000483631 PCBP1Q15365 356 aaKnown RBP eCLIP22.19■■□□□ 1.14
HPS4-213ENST00000483631 CLLU1OSQ5K130 101 aa22.19■■□□□ 1.14
HPS4-213ENST00000483631 NCAPH2Q6IBW4 605 aa22.19■■□□□ 1.14
HPS4-213ENST00000483631 KCNT2Q6UVM3 1135 aa22.19■■□□□ 1.14
HPS4-213ENST00000483631 LRRC55Q6ZSA7 311 aa22.19■■□□□ 1.14
HPS4-213ENST00000483631 SRGAP1Q7Z6B7 1085 aa22.19■■□□□ 1.14
HPS4-213ENST00000483631 ADGRD2Q7Z7M1 963 aa22.19■■□□□ 1.14
HPS4-213ENST00000483631 ADHFE1Q8IWW8 467 aa22.19■■□□□ 1.14
HPS4-213ENST00000483631 PSPC1Q8WXF1 523 aaKnown RBP22.19■■□□□ 1.14
HPS4-213ENST00000483631 MSLNLQ96KJ4 702 aa22.19■■□□□ 1.14
HPS4-213ENST00000483631 ZNF558Q96NG5 402 aa22.19■■□□□ 1.14
HPS4-213ENST00000483631 POP1Q99575 1024 aaKnown RBP22.19■■□□□ 1.14
HPS4-213ENST00000483631 LLPHQ9BRT6 129 aaKnown RBP22.19■■□□□ 1.14
HPS4-213ENST00000483631 EPHX3Q9H6B9 360 aa22.19■■□□□ 1.14
HPS4-213ENST00000483631 IFT122Q9HBG6 1241 aa22.19■■□□□ 1.14
HPS4-213ENST00000483631 LIMCH1Q9UPQ0 1083 aa22.19■■□□□ 1.14
HPS4-213ENST00000483631 FAM205CA6NFA0 338 aa22.18■■□□□ 1.14
HPS4-213ENST00000483631 JAK2O60674 1132 aa22.18■■□□□ 1.14
HPS4-213ENST00000483631 GPR37L1O60883 481 aa22.18■■□□□ 1.14
HPS4-213ENST00000483631 SEC24BO95487 1268 aa22.18■■□□□ 1.14
HPS4-213ENST00000483631 COL9A1P20849 921 aa22.18■■□□□ 1.14
HPS4-213ENST00000483631 GTF2F1P35269 517 aaKnown RBP eCLIP22.18■■□□□ 1.14
HPS4-213ENST00000483631 NDUFV1P49821 464 aa22.18■■□□□ 1.14
HPS4-213ENST00000483631 COASYQ13057 564 aa22.18■■□□□ 1.14
HPS4-213ENST00000483631 CALCRLQ16602 461 aa22.18■■□□□ 1.14
HPS4-213ENST00000483631 CATSPER4Q7RTX7 472 aa22.18■■□□□ 1.14
HPS4-213ENST00000483631 MICAL1Q8TDZ2 1067 aa22.18■■□□□ 1.14
HPS4-213ENST00000483631 DYDC2Q96IM9 177 aa22.18■■□□□ 1.14
HPS4-213ENST00000483631 NLRP4Q96MN2 994 aa22.18■■□□□ 1.14
HPS4-213ENST00000483631 HSD17B14Q9BPX1 270 aa22.18■■□□□ 1.14
HPS4-213ENST00000483631 TLE6Q9H808 572 aa22.18■■□□□ 1.14
HPS4-213ENST00000483631 NGRNQ9NPE2 291 aaKnown RBP22.18■■□□□ 1.14
HPS4-213ENST00000483631 RGL1Q9NZL6 768 aa22.18■■□□□ 1.14
HPS4-213ENST00000483631 HCSTQ9UBK5 93 aa22.18■■□□□ 1.14
HPS4-213ENST00000483631 LINC01565O15544 149 aa22.17■■□□□ 1.14
HPS4-213ENST00000483631 NEMFO60524 1076 aa22.17■■□□□ 1.14
HPS4-213ENST00000483631 CSDE1O75534 798 aaKnown RBP22.17■■□□□ 1.14
HPS4-213ENST00000483631 SLITRK3O94933 977 aa22.17■■□□□ 1.14
HPS4-213ENST00000483631 ALADP13716 330 aa22.17■■□□□ 1.14
HPS4-213ENST00000483631 SSTR3P32745 418 aaPredicted RBP22.17■■□□□ 1.14
HPS4-213ENST00000483631 NRIP1P48552 1158 aa22.17■■□□□ 1.14
HPS4-213ENST00000483631 KRT17Q04695 432 aa22.17■■□□□ 1.14
HPS4-213ENST00000483631 TWF2Q6IBS0 349 aaKnown RBP22.17■■□□□ 1.14
HPS4-213ENST00000483631 AGPAT5Q9NUQ2 364 aa22.17■■□□□ 1.14
HPS4-213ENST00000483631 SPG21Q9NZD8 308 aa22.17■■□□□ 1.14
HPS4-213ENST00000483631 PIN4Q9Y237 131 aaKnown RBP22.17■■□□□ 1.14
HPS4-213ENST00000483631 DTNBO60941 627 aa22.16■■□□□ 1.14
HPS4-213ENST00000483631 CSPG5O95196 566 aa22.16■■□□□ 1.14
HPS4-213ENST00000483631 ERVFC1P60507 584 aa22.16■■□□□ 1.14
HPS4-213ENST00000483631 ST3GAL1Q11201 340 aa22.16■■□□□ 1.14
HPS4-213ENST00000483631 ORC2Q13416 577 aaPredicted RBP22.16■■□□□ 1.14
HPS4-213ENST00000483631 EMC2Q15006 297 aa22.16■■□□□ 1.14
HPS4-213ENST00000483631 SAFBQ15424 915 aaKnown RBP eCLIP22.16■■□□□ 1.14
HPS4-213ENST00000483631 DUSP6Q16828 381 aa22.16■■□□□ 1.14
HPS4-213ENST00000483631 TMEM31Q5JXX7 168 aa22.16■■□□□ 1.14
HPS4-213ENST00000483631 KSR1Q8IVT5 923 aa22.16■■□□□ 1.14
HPS4-213ENST00000483631 ZNF579Q8NAF0 562 aaKnown RBP22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms