RNA–Protein interactions for RNA: ENST00000483541.1

NSMCE4A-210, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE4A, Length 694 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-210ENST00000483541 MIEF2Q96C03 454 aa5.37□□□□□ -1.55
NSMCE4A-210ENST00000483541 GPHA2Q96T91 129 aa5.37□□□□□ -1.55
NSMCE4A-210ENST00000483541 OSBPL6Q9BZF3 934 aa5.37□□□□□ -1.55
NSMCE4A-210ENST00000483541 POLR3BQ9NW08 1133 aaPredicted RBP5.37□□□□□ -1.55
NSMCE4A-210ENST00000483541 IFT57Q9NWB7 429 aa5.37□□□□□ -1.55
NSMCE4A-210ENST00000483541 OXSMQ9NWU1 459 aa5.37□□□□□ -1.55
NSMCE4A-210ENST00000483541 MAGEL2Q9UJ55 1249 aa5.37□□□□□ -1.55
NSMCE4A-210ENST00000483541 SH3BP1Q9Y3L3 701 aa5.37□□□□□ -1.55
NSMCE4A-210ENST00000483541 A0A0A6YYJ9 748 aa5.36□□□□□ -1.55
NSMCE4A-210ENST00000483541 ZNF202O95125 648 aa5.36□□□□□ -1.55
NSMCE4A-210ENST00000483541 PEX11BO96011 259 aa5.36□□□□□ -1.55
NSMCE4A-210ENST00000483541 JUNP05412 331 aaKnown RBP5.36□□□□□ -1.55
NSMCE4A-210ENST00000483541 C1SP09871 688 aa5.36□□□□□ -1.55
NSMCE4A-210ENST00000483541 VSIG10L2P0DP72 767 aa5.36□□□□□ -1.55
NSMCE4A-210ENST00000483541 TGFB2P61812 414 aa5.36□□□□□ -1.55
NSMCE4A-210ENST00000483541 ADCY2Q08462 1091 aa5.36□□□□□ -1.55
NSMCE4A-210ENST00000483541 KLF10Q13118 480 aa5.36□□□□□ -1.55
NSMCE4A-210ENST00000483541 LRRC32Q14392 662 aa5.36□□□□□ -1.55
NSMCE4A-210ENST00000483541 MAN2A1Q16706 1144 aa5.36□□□□□ -1.55
NSMCE4A-210ENST00000483541 ESRP1Q6NXG1 681 aaKnown RBP5.36□□□□□ -1.55
NSMCE4A-210ENST00000483541 FAM111BQ6SJ93 734 aa5.36□□□□□ -1.55
NSMCE4A-210ENST00000483541 C7orf31Q8N865 590 aa5.36□□□□□ -1.55
NSMCE4A-210ENST00000483541 RPL10LQ96L21 214 aaKnown RBP5.36□□□□□ -1.55
NSMCE4A-210ENST00000483541 RNPC3Q96LT9 517 aaKnown RBP5.36□□□□□ -1.55
NSMCE4A-210ENST00000483541 PARPBPQ9NWS1 579 aa5.36□□□□□ -1.55
NSMCE4A-210ENST00000483541 GAS7O60861 476 aa5.35□□□□□ -1.55
NSMCE4A-210ENST00000483541 PRPF6O94906 941 aaKnown RBP5.35□□□□□ -1.55
NSMCE4A-210ENST00000483541 ATP2A2P16615 1042 aaKnown RBP5.35□□□□□ -1.55
NSMCE4A-210ENST00000483541 STAT3P40763 770 aa5.35□□□□□ -1.55
NSMCE4A-210ENST00000483541 DGCR2P98153 550 aa5.35□□□□□ -1.55
NSMCE4A-210ENST00000483541 PURAQ00577 322 aaKnown RBP5.35□□□□□ -1.55
NSMCE4A-210ENST00000483541 TUBA3CQ13748 450 aa5.35□□□□□ -1.55
NSMCE4A-210ENST00000483541 RRP1BQ14684 758 aaKnown RBP5.35□□□□□ -1.55
NSMCE4A-210ENST00000483541 IGFL4Q6B9Z1 124 aa5.35□□□□□ -1.55
NSMCE4A-210ENST00000483541 KIAA1841Q6NSI8 718 aa5.35□□□□□ -1.55
NSMCE4A-210ENST00000483541 TUBA3EQ6PEY2 450 aa5.35□□□□□ -1.55
NSMCE4A-210ENST00000483541 C16orf86Q6ZW13 317 aa5.35□□□□□ -1.55
NSMCE4A-210ENST00000483541 GAREM2Q75VX8 874 aa5.35□□□□□ -1.55
NSMCE4A-210ENST00000483541 PASD1Q8IV76 773 aa5.35□□□□□ -1.55
NSMCE4A-210ENST00000483541 GSPT2Q8IYD1 628 aaKnown RBP5.35□□□□□ -1.55
NSMCE4A-210ENST00000483541 EFHBQ8N7U6 833 aa5.35□□□□□ -1.55
NSMCE4A-210ENST00000483541 TCF25Q9BQ70 676 aa5.35□□□□□ -1.55
NSMCE4A-210ENST00000483541 SLITRK6Q9H5Y7 841 aa5.35□□□□□ -1.55
NSMCE4A-210ENST00000483541 IL23AQ9NPF7 189 aa5.35□□□□□ -1.55
NSMCE4A-210ENST00000483541 TOMM22Q9NS69 142 aa5.35□□□□□ -1.55
NSMCE4A-210ENST00000483541 CEP72Q9P209 647 aa5.35□□□□□ -1.55
NSMCE4A-210ENST00000483541 USP36Q9P275 1121 aaKnown RBP5.35□□□□□ -1.55
NSMCE4A-210ENST00000483541 HECAQ9UBI9 543 aaPredicted RBP5.35□□□□□ -1.55
NSMCE4A-210ENST00000483541 UBE2QL1A1L167 161 aa5.34□□□□□ -1.55
NSMCE4A-210ENST00000483541 MTSS1O43312 755 aa5.34□□□□□ -1.55
NSMCE4A-210ENST00000483541 KIR2DL3P43628 341 aa5.34□□□□□ -1.55
NSMCE4A-210ENST00000483541 DSG1Q02413 1049 aa5.34□□□□□ -1.55
NSMCE4A-210ENST00000483541 FHL2Q14192 279 aa5.34□□□□□ -1.55
NSMCE4A-210ENST00000483541 ACAP1Q15027 740 aa5.34□□□□□ -1.55
NSMCE4A-210ENST00000483541 MFSD5Q6N075 450 aa5.34□□□□□ -1.55
NSMCE4A-210ENST00000483541 ZNF662Q6ZS27 426 aa5.34□□□□□ -1.55
NSMCE4A-210ENST00000483541 LRRTM3Q86VH5 581 aa5.34□□□□□ -1.55
NSMCE4A-210ENST00000483541 NINJ1Q92982 152 aa5.34□□□□□ -1.55
NSMCE4A-210ENST00000483541 MYL10Q9BUA6 226 aa5.34□□□□□ -1.55
NSMCE4A-210ENST00000483541 MTFR1LQ9H019 292 aa5.34□□□□□ -1.55
NSMCE4A-210ENST00000483541 MTG2Q9H4K7 406 aa5.34□□□□□ -1.55
NSMCE4A-210ENST00000483541 C14orf93Q9H972 538 aaKnown RBP5.34□□□□□ -1.55
NSMCE4A-210ENST00000483541 OPHN1O60890 802 aa5.33□□□□□ -1.56
NSMCE4A-210ENST00000483541 TOX4O94842 621 aa5.33□□□□□ -1.56
NSMCE4A-210ENST00000483541 FSBPO95073 299 aa5.33□□□□□ -1.56
NSMCE4A-210ENST00000483541 MAKP20794 623 aa5.33□□□□□ -1.56
NSMCE4A-210ENST00000483541 CD40P25942 277 aa5.33□□□□□ -1.56
NSMCE4A-210ENST00000483541 NEK4P51957 841 aa5.33□□□□□ -1.56
NSMCE4A-210ENST00000483541 SMAD3P84022 425 aaKnown RBP5.33□□□□□ -1.56
NSMCE4A-210ENST00000483541 DPTQ07507 201 aa5.33□□□□□ -1.56
NSMCE4A-210ENST00000483541 CRHR2Q13324 411 aa5.33□□□□□ -1.56
NSMCE4A-210ENST00000483541 GPR158Q5T848 1215 aa5.33□□□□□ -1.56
NSMCE4A-210ENST00000483541 PPP1R14CQ8TAE6 165 aa5.33□□□□□ -1.56
NSMCE4A-210ENST00000483541 APPBP2Q92624 585 aa5.33□□□□□ -1.56
NSMCE4A-210ENST00000483541 MENTQ9BUN1 341 aa5.33□□□□□ -1.56
NSMCE4A-210ENST00000483541 ZMAT4Q9H898 229 aa5.33□□□□□ -1.56
NSMCE4A-210ENST00000483541 DNAI1Q9UI46 699 aa5.33□□□□□ -1.56
NSMCE4A-210ENST00000483541 ING1Q9UK53 422 aaPredicted RBP5.33□□□□□ -1.56
NSMCE4A-210ENST00000483541 RCAN3Q9UKA8 241 aa5.33□□□□□ -1.56
NSMCE4A-210ENST00000483541 CD2APQ9Y5K6 639 aa5.33□□□□□ -1.56
NSMCE4A-210ENST00000483541 WDR33Q9C0J8 1336 aaKnown RBP5.32□□□□□ -1.56
NSMCE4A-210ENST00000483541 FAM83GA6ND36 823 aa5.32□□□□□ -1.56
NSMCE4A-210ENST00000483541 MAN2A2P49641 1150 aa5.32□□□□□ -1.56
NSMCE4A-210ENST00000483541 CNGB1Q14028 1251 aaPredicted RBP5.32□□□□□ -1.56
NSMCE4A-210ENST00000483541 ELAVL1Q15717 326 aaKnown RBP5.32□□□□□ -1.56
NSMCE4A-210ENST00000483541 FNDC7Q5VTL7 733 aa5.32□□□□□ -1.56
NSMCE4A-210ENST00000483541 KRT40Q6A162 431 aa5.32□□□□□ -1.56
NSMCE4A-210ENST00000483541 UNQ6494/PRO21346Q6UXR6 183 aa5.32□□□□□ -1.56
NSMCE4A-210ENST00000483541 CMTM4Q8IZR5 234 aa5.32□□□□□ -1.56
NSMCE4A-210ENST00000483541 AHI1Q8N157 1196 aa5.32□□□□□ -1.56
NSMCE4A-210ENST00000483541 RTF1Q92541 710 aaKnown RBP5.32□□□□□ -1.56
NSMCE4A-210ENST00000483541 HIST1H2AHQ96KK5 128 aa5.32□□□□□ -1.56
NSMCE4A-210ENST00000483541 HIST1H2AJQ99878 128 aa5.32□□□□□ -1.56
NSMCE4A-210ENST00000483541 TRIM8Q9BZR9 551 aa5.32□□□□□ -1.56
NSMCE4A-210ENST00000483541 POFUT1Q9H488 388 aa5.32□□□□□ -1.56
NSMCE4A-210ENST00000483541 MRPL42Q9Y6G3 142 aaKnown RBP5.32□□□□□ -1.56
NSMCE4A-210ENST00000483541 XDHP47989 1333 aa5.31□□□□□ -1.56
NSMCE4A-210ENST00000483541 MYPNQ86TC9 1320 aa5.31□□□□□ -1.56
NSMCE4A-210ENST00000483541 A0A0A6YYK5 440 aaPredicted RBP5.31□□□□□ -1.56
NSMCE4A-210ENST00000483541 KPNA6O60684 536 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms