RNA–Protein interactions for RNA: ENST00000482563.1

RBM39-233, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 1,737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-233ENST00000482563 CNPPD1Q9BV87 410 aa8.37□□□□□ -1.07
RBM39-233ENST00000482563 PDGFDQ9GZP0 370 aaPredicted RBP8.37□□□□□ -1.07
RBM39-233ENST00000482563 RAD18Q9NS91 495 aa8.37□□□□□ -1.07
RBM39-233ENST00000482563 PGPEP1LA6NFU8 196 aa8.37□□□□□ -1.07
RBM39-233ENST00000482563 F5H0A9 414 aaPredicted RBP8.37□□□□□ -1.07
RBM39-233ENST00000482563 H7C1W4 665 aa8.37□□□□□ -1.07
RBM39-233ENST00000482563 FOXN3O00409 490 aaPredicted RBP8.37□□□□□ -1.07
RBM39-233ENST00000482563 SYT5O00445 386 aa8.37□□□□□ -1.07
RBM39-233ENST00000482563 PARP1P09874 1014 aaKnown RBP8.37□□□□□ -1.07
RBM39-233ENST00000482563 TPP2P29144 1249 aaPredicted RBP8.37□□□□□ -1.07
RBM39-233ENST00000482563 ATICP31939 592 aa8.37□□□□□ -1.07
RBM39-233ENST00000482563 IL12RB1P42701 662 aa8.37□□□□□ -1.07
RBM39-233ENST00000482563 DRG2P55039 364 aaKnown RBP8.37□□□□□ -1.07
RBM39-233ENST00000482563 DUSP4Q13115 394 aa8.37□□□□□ -1.07
RBM39-233ENST00000482563 SPARCL1Q14515 664 aa8.37□□□□□ -1.07
RBM39-233ENST00000482563 FAM117BQ6P1L5 589 aa8.37□□□□□ -1.07
RBM39-233ENST00000482563 SIAH1Q8IUQ4 282 aa8.37□□□□□ -1.07
RBM39-233ENST00000482563 NUDT8Q8WV74 236 aa8.37□□□□□ -1.07
RBM39-233ENST00000482563 C16orf92Q96LL3 132 aa8.37□□□□□ -1.07
RBM39-233ENST00000482563 PTPN18Q99952 460 aa8.37□□□□□ -1.07
RBM39-233ENST00000482563 PNPLA8Q9NP80 782 aa8.37□□□□□ -1.07
RBM39-233ENST00000482563 NSMCE4AQ9NXX6 385 aa8.37□□□□□ -1.07
RBM39-233ENST00000482563 SLC35F4A4IF30 521 aa8.36□□□□□ -1.07
RBM39-233ENST00000482563 MYO1FO00160 1098 aa8.36□□□□□ -1.07
RBM39-233ENST00000482563 SOAT2O75908 522 aa8.36□□□□□ -1.07
RBM39-233ENST00000482563 SCP2P22307 547 aa8.36□□□□□ -1.07
RBM39-233ENST00000482563 SLC5A3P53794 718 aa8.36□□□□□ -1.07
RBM39-233ENST00000482563 SLC16A1P53985 500 aa8.36□□□□□ -1.07
RBM39-233ENST00000482563 CREMQ03060 361 aa8.36□□□□□ -1.07
RBM39-233ENST00000482563 SUZ12Q15022 739 aaKnown RBP8.36□□□□□ -1.07
RBM39-233ENST00000482563 PLCB4Q15147 1175 aa8.36□□□□□ -1.07
RBM39-233ENST00000482563 SURF1Q15526 300 aa8.36□□□□□ -1.07
RBM39-233ENST00000482563 TIGD6Q17RP2 521 aa8.36□□□□□ -1.07
RBM39-233ENST00000482563 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.36□□□□□ -1.072e-8■□□□□ 11.2
RBM39-233ENST00000482563 ZBTB41Q5SVQ8 909 aa8.36□□□□□ -1.07
RBM39-233ENST00000482563 OXR1Q8N573 874 aa8.36□□□□□ -1.07
RBM39-233ENST00000482563 MFSD2AQ8NA29 543 aa8.36□□□□□ -1.07
RBM39-233ENST00000482563 STT3BQ8TCJ2 826 aa8.36□□□□□ -1.07
RBM39-233ENST00000482563 SH3RF2Q8TEC5 729 aa8.36□□□□□ -1.07
RBM39-233ENST00000482563 DLG3Q92796 817 aa8.36□□□□□ -1.07
RBM39-233ENST00000482563 KAT5Q92993 513 aa8.36□□□□□ -1.07
RBM39-233ENST00000482563 AGXT2Q9BYV1 514 aa8.36□□□□□ -1.07
RBM39-233ENST00000482563 CHST7Q9NS84 486 aa8.36□□□□□ -1.07
RBM39-233ENST00000482563 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.36□□□□□ -1.07
RBM39-233ENST00000482563 SNX5Q9Y5X3 404 aa8.36□□□□□ -1.07
RBM39-233ENST00000482563 B3GALT1Q9Y5Z6 326 aa8.36□□□□□ -1.07
RBM39-233ENST00000482563 AQP12BA6NM10 295 aa8.35□□□□□ -1.07
RBM39-233ENST00000482563 ADARB2-AS1A8MUL3 147 aa8.35□□□□□ -1.07
RBM39-233ENST00000482563 MAN2B1O00754 1011 aa8.35□□□□□ -1.07
RBM39-233ENST00000482563 LRIG2O94898 1065 aa8.35□□□□□ -1.07
RBM39-233ENST00000482563 IL10RAQ13651 578 aa8.35□□□□□ -1.07
RBM39-233ENST00000482563 KRT32Q14532 448 aa8.35□□□□□ -1.07
RBM39-233ENST00000482563 LETMD1Q6P1Q0 360 aa8.35□□□□□ -1.07
RBM39-233ENST00000482563 ARHGAP36Q6ZRI8 547 aa8.35□□□□□ -1.07
RBM39-233ENST00000482563 LYSMD2Q8IV50 215 aa8.35□□□□□ -1.07
RBM39-233ENST00000482563 TRMT2AQ8IZ69 625 aaKnown RBP8.35□□□□□ -1.07
RBM39-233ENST00000482563 NRG4Q8WWG1 115 aa8.35□□□□□ -1.07
RBM39-233ENST00000482563 IPCEF1Q8WWN9 437 aaPredicted RBP8.35□□□□□ -1.07
RBM39-233ENST00000482563 ERCC4Q92889 916 aaPredicted RBP8.35□□□□□ -1.07
RBM39-233ENST00000482563 ATP6V1E2Q96A05 226 aa8.35□□□□□ -1.07
RBM39-233ENST00000482563 SH3KBP1Q96B97 665 aa8.35□□□□□ -1.07
RBM39-233ENST00000482563 JAM3Q9BX67 310 aa8.35□□□□□ -1.07
RBM39-233ENST00000482563 IRAK4Q9NWZ3 460 aa8.35□□□□□ -1.07
RBM39-233ENST00000482563 ZSWIM5Q9P217 1185 aa8.35□□□□□ -1.07
RBM39-233ENST00000482563 KIF17Q9P2E2 1029 aa8.35□□□□□ -1.07
RBM39-233ENST00000482563 TMPRSS11EQ9UL52 423 aa8.35□□□□□ -1.07
RBM39-233ENST00000482563 SLC39A10Q9ULF5 831 aa8.35□□□□□ -1.07
RBM39-233ENST00000482563 GPR25O00155 361 aa8.34□□□□□ -1.07
RBM39-233ENST00000482563 ELL2O00472 640 aaPredicted RBP8.34□□□□□ -1.07
RBM39-233ENST00000482563 ZBED4O75132 1171 aa8.34□□□□□ -1.07
RBM39-233ENST00000482563 MTHFD1P11586 935 aaKnown RBP8.34□□□□□ -1.07
RBM39-233ENST00000482563 XBP1P17861 261 aa8.34□□□□□ -1.07
RBM39-233ENST00000482563 HTRA4P83105 476 aaPredicted RBP8.34□□□□□ -1.07
RBM39-233ENST00000482563 TUSC3Q13454 348 aa8.34□□□□□ -1.07
RBM39-233ENST00000482563 GPR19Q15760 415 aa8.34□□□□□ -1.07
RBM39-233ENST00000482563 PAN2Q504Q3 1202 aaKnown RBP8.34□□□□□ -1.07
RBM39-233ENST00000482563 AUTS2Q8WXX7 1259 aa8.34□□□□□ -1.07
RBM39-233ENST00000482563 ZNF566Q969W8 418 aa8.34□□□□□ -1.07
RBM39-233ENST00000482563 HEPHQ9BQS7 1158 aa8.34□□□□□ -1.07
RBM39-233ENST00000482563 KATNAL1Q9BW62 490 aa8.34□□□□□ -1.07
RBM39-233ENST00000482563 DHX36Q9H2U1 1008 aaKnown RBP8.34□□□□□ -1.07
RBM39-233ENST00000482563 ZNF287Q9HBT7 754 aa8.34□□□□□ -1.07
RBM39-233ENST00000482563 ACSS2Q9NR19 701 aa8.34□□□□□ -1.07
RBM39-233ENST00000482563 KCNK4Q9NYG8 393 aa8.34□□□□□ -1.07
RBM39-233ENST00000482563 DPP7Q9UHL4 492 aa8.34□□□□□ -1.07
RBM39-233ENST00000482563 PRSS38A1L453 326 aa8.34□□□□□ -1.07
RBM39-233ENST00000482563 SMTNL1A8MU46 457 aa8.34□□□□□ -1.07
RBM39-233ENST00000482563 C19orf81C9J6K1 198 aa8.34□□□□□ -1.07
RBM39-233ENST00000482563 SCDO00767 359 aa8.34□□□□□ -1.07
RBM39-233ENST00000482563 RGS9O75916 674 aaPredicted RBP8.34□□□□□ -1.07
RBM39-233ENST00000482563 BCRP11274 1271 aa8.34□□□□□ -1.07
RBM39-233ENST00000482563 MTHFD2P13995 350 aa8.34□□□□□ -1.07
RBM39-233ENST00000482563 SEPHS1P49903 392 aa8.34□□□□□ -1.07
RBM39-233ENST00000482563 FOXO4P98177 505 aa8.34□□□□□ -1.07
RBM39-233ENST00000482563 SCARF1Q14162 830 aa8.34□□□□□ -1.07
RBM39-233ENST00000482563 HP1BP3Q5SSJ5 553 aaPredicted RBP8.34□□□□□ -1.07
RBM39-233ENST00000482563 MFSD4BQ5TF39 518 aa8.34□□□□□ -1.07
RBM39-233ENST00000482563 HERC6Q8IVU3 1022 aa8.34□□□□□ -1.07
RBM39-233ENST00000482563 ZZZ3Q8IYH5 903 aa8.34□□□□□ -1.07
RBM39-233ENST00000482563 ZMIZ2Q8NF64 920 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms