RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 CATSPER3Q86XQ3 398 aa13.25□□□□□ -0.29
HMGN1-213ENST00000482192 POLR3CQ9BUI4 534 aaPredicted RBP13.25□□□□□ -0.29
HMGN1-213ENST00000482192 IFT122Q9HBG6 1241 aa13.25□□□□□ -0.29
HMGN1-213ENST00000482192 EVPLQ92817 2033 aa13.25□□□□□ -0.29
HMGN1-213ENST00000482192 RALGAPA2Q2PPJ7 1873 aa13.25□□□□□ -0.29
HMGN1-213ENST00000482192 LOXHD1Q8IVV2 1947 aa13.24□□□□□ -0.29
HMGN1-213ENST00000482192 A0A0U1RQF3 1178 aa13.24□□□□□ -0.29
HMGN1-213ENST00000482192 TBKBP1A7MCY6 615 aa13.24□□□□□ -0.29
HMGN1-213ENST00000482192 SRGAP2CP0DJJ0 459 aa13.24□□□□□ -0.29
HMGN1-213ENST00000482192 FGFR1P11362 822 aa13.24□□□□□ -0.29
HMGN1-213ENST00000482192 RPA1P27694 616 aa13.24□□□□□ -0.29
HMGN1-213ENST00000482192 MRPS5P82675 430 aaKnown RBP13.24□□□□□ -0.29
HMGN1-213ENST00000482192 MXD4Q14582 209 aaPredicted RBP13.24□□□□□ -0.29
HMGN1-213ENST00000482192 NBR1Q14596 966 aa13.24□□□□□ -0.29
HMGN1-213ENST00000482192 AAK1Q2M2I8 961 aa13.24□□□□□ -0.29
HMGN1-213ENST00000482192 NAALADL2Q58DX5 795 aa13.24□□□□□ -0.29
HMGN1-213ENST00000482192 RILPL1Q5EBL4 403 aa13.24□□□□□ -0.29
HMGN1-213ENST00000482192 TJAP1Q5JTD0 557 aa13.24□□□□□ -0.29
HMGN1-213ENST00000482192 FAM102BQ5T8I3 360 aa13.24□□□□□ -0.29
HMGN1-213ENST00000482192 CATSPER4Q7RTX7 472 aa13.24□□□□□ -0.29
HMGN1-213ENST00000482192 SRGAP1Q7Z6B7 1085 aa13.24□□□□□ -0.29
HMGN1-213ENST00000482192 ABI1Q8IZP0 508 aa13.24□□□□□ -0.29
HMGN1-213ENST00000482192 C4orf32Q8N8J7 132 aa13.24□□□□□ -0.29
HMGN1-213ENST00000482192 PIGOQ8TEQ8 1089 aa13.24□□□□□ -0.29
HMGN1-213ENST00000482192 P2RX5Q93086 422 aa13.24□□□□□ -0.29
HMGN1-213ENST00000482192 ASB2Q96Q27 587 aa13.24□□□□□ -0.29
HMGN1-213ENST00000482192 NACC1Q96RE7 527 aa13.24□□□□□ -0.29
HMGN1-213ENST00000482192 TRAIPQ9BWF2 469 aa13.24□□□□□ -0.29
HMGN1-213ENST00000482192 RAB34Q9BZG1 259 aa13.24□□□□□ -0.29
HMGN1-213ENST00000482192 LMAN2LQ9H0V9 348 aa13.24□□□□□ -0.29
HMGN1-213ENST00000482192 XPNPEP1Q9NQW7 623 aa13.24□□□□□ -0.29
HMGN1-213ENST00000482192 DBR1Q9UK59 544 aaKnown RBP13.24□□□□□ -0.29
HMGN1-213ENST00000482192 COG5Q9UP83 839 aa13.24□□□□□ -0.29
HMGN1-213ENST00000482192 PIN4Q9Y237 131 aaKnown RBP13.24□□□□□ -0.29
HMGN1-213ENST00000482192 PCDHB6Q9Y5E3 794 aa13.24□□□□□ -0.29
HMGN1-213ENST00000482192 MED24O75448 989 aa13.23□□□□□ -0.29
HMGN1-213ENST00000482192 EOMESO95936 686 aa13.23□□□□□ -0.29
HMGN1-213ENST00000482192 PHKA2P46019 1235 aa13.23□□□□□ -0.29
HMGN1-213ENST00000482192 PTGDRQ13258 359 aa13.23□□□□□ -0.29
HMGN1-213ENST00000482192 TFDP1Q14186 410 aa13.23□□□□□ -0.29
HMGN1-213ENST00000482192 PDIA5Q14554 519 aa13.23□□□□□ -0.29
HMGN1-213ENST00000482192 TWF2Q6IBS0 349 aaKnown RBP13.23□□□□□ -0.29
HMGN1-213ENST00000482192 POTEGQ6S5H5 508 aa13.23□□□□□ -0.29
HMGN1-213ENST00000482192 ECHDC2Q86YB7 292 aa13.23□□□□□ -0.29
HMGN1-213ENST00000482192 RNF149Q8NC42 400 aa13.23□□□□□ -0.29
HMGN1-213ENST00000482192 RNF169Q8NCN4 708 aa13.23□□□□□ -0.29
HMGN1-213ENST00000482192 SYMPKQ92797 1274 aaKnown RBP13.23□□□□□ -0.29
HMGN1-213ENST00000482192 TMEM117Q9H0C3 514 aa13.23□□□□□ -0.29
HMGN1-213ENST00000482192 AAASQ9NRG9 546 aa13.23□□□□□ -0.29
HMGN1-213ENST00000482192 AGPAT5Q9NUQ2 364 aa13.23□□□□□ -0.29
HMGN1-213ENST00000482192 LRWD1Q9UFC0 647 aa13.23□□□□□ -0.29
HMGN1-213ENST00000482192 STK24Q9Y6E0 443 aa13.23□□□□□ -0.29
HMGN1-213ENST00000482192 ARID2Q68CP9 1835 aa13.23□□□□□ -0.29
HMGN1-213ENST00000482192 GRM6O15303 877 aa13.22□□□□□ -0.29
HMGN1-213ENST00000482192 SKIP12755 728 aa13.22□□□□□ -0.29
HMGN1-213ENST00000482192 MUTP22033 750 aa13.22□□□□□ -0.29
HMGN1-213ENST00000482192 PRPHP41219 470 aa13.22□□□□□ -0.29
HMGN1-213ENST00000482192 RAB27AP51159 221 aa13.22□□□□□ -0.29
HMGN1-213ENST00000482192 PCBP1Q15365 356 aaKnown RBP eCLIP13.22□□□□□ -0.29
HMGN1-213ENST00000482192 SPOUT1Q5T280 376 aaKnown RBP13.22□□□□□ -0.29
HMGN1-213ENST00000482192 LARP1BQ659C4 914 aaKnown RBP13.22□□□□□ -0.29
HMGN1-213ENST00000482192 ZNF598Q86UK7 904 aaKnown RBP13.22□□□□□ -0.29
HMGN1-213ENST00000482192 LRRC43Q8N309 656 aa13.22□□□□□ -0.29
HMGN1-213ENST00000482192 IGSF22Q8N9C0 903 aa13.22□□□□□ -0.29
HMGN1-213ENST00000482192 MCPH1Q8NEM0 835 aa13.22□□□□□ -0.29
HMGN1-213ENST00000482192 RSPH1Q8WYR4 309 aa13.22□□□□□ -0.29
HMGN1-213ENST00000482192 HLA-CQ95604 372 aa13.22□□□□□ -0.29
HMGN1-213ENST00000482192 COL25A1Q9BXS0 654 aaPredicted RBP13.22□□□□□ -0.29
HMGN1-213ENST00000482192 NSUN3Q9H649 340 aaKnown RBP13.22□□□□□ -0.29
HMGN1-213ENST00000482192 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.22□□□□□ -0.29
HMGN1-213ENST00000482192 PLAGL2Q9UPG8 496 aa13.22□□□□□ -0.29
HMGN1-213ENST00000482192 PCDHB12Q9Y5F1 795 aa13.22□□□□□ -0.29
HMGN1-213ENST00000482192 NLRC5Q86WI3 1866 aa13.22□□□□□ -0.29
HMGN1-213ENST00000482192 CHD7Q9P2D1 2997 aa13.21□□□□□ -0.29
HMGN1-213ENST00000482192 A0A087WWV3 80 aa13.21□□□□□ -0.29
HMGN1-213ENST00000482192 USO1O60763 962 aaKnown RBP13.21□□□□□ -0.29
HMGN1-213ENST00000482192 ERLIN2O94905 339 aa13.21□□□□□ -0.29
HMGN1-213ENST00000482192 ATF7P17544 494 aaPredicted RBP13.21□□□□□ -0.29
HMGN1-213ENST00000482192 LAG3P18627 525 aa13.21□□□□□ -0.29
HMGN1-213ENST00000482192 ARL2P36404 184 aa13.21□□□□□ -0.29
HMGN1-213ENST00000482192 CCT6AP40227 531 aaKnown RBP13.21□□□□□ -0.29
HMGN1-213ENST00000482192 TFF2Q03403 129 aa13.21□□□□□ -0.29
HMGN1-213ENST00000482192 POU5F1BQ06416 359 aa13.21□□□□□ -0.29
HMGN1-213ENST00000482192 CUL4AQ13619 759 aa13.21□□□□□ -0.29
HMGN1-213ENST00000482192 CSPP1Q1MSJ5 1256 aa13.21□□□□□ -0.29
HMGN1-213ENST00000482192 DTHD1Q6ZMT9 781 aa13.21□□□□□ -0.29
HMGN1-213ENST00000482192 KLHL23Q8NBE8 558 aa13.21□□□□□ -0.29
HMGN1-213ENST00000482192 CASD1Q96PB1 797 aa13.21□□□□□ -0.29
HMGN1-213ENST00000482192 MRPL9Q9BYD2 267 aaKnown RBP13.21□□□□□ -0.29
HMGN1-213ENST00000482192 MINDY3Q9H8M7 445 aa13.21□□□□□ -0.29
HMGN1-213ENST00000482192 ALG13Q9NP73 1137 aaKnown RBP13.21□□□□□ -0.29
HMGN1-213ENST00000482192 FAM105AQ9NUU6 356 aa13.21□□□□□ -0.29
HMGN1-213ENST00000482192 RNF19AQ9NV58 838 aa13.21□□□□□ -0.29
HMGN1-213ENST00000482192 TYW1Q9NV66 732 aaKnown RBP13.21□□□□□ -0.29
HMGN1-213ENST00000482192 ARHGEF35A5YM69 484 aa13.2□□□□□ -0.3
HMGN1-213ENST00000482192 ITGB1P05556 798 aa13.2□□□□□ -0.3
HMGN1-213ENST00000482192 PDCP20941 246 aa13.2□□□□□ -0.3
HMGN1-213ENST00000482192 GLRA2P23416 452 aa13.2□□□□□ -0.3
HMGN1-213ENST00000482192 PTENP60484 403 aa13.2□□□□□ -0.3
HMGN1-213ENST00000482192 ATP2C1P98194 919 aaPredicted RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms