RNA–Protein interactions for RNA: ENST00000482086.5

PCCB-215, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-215ENST00000482086 TFDP1Q14186 410 aa16.1■□□□□ 0.17
PCCB-215ENST00000482086 LRRC41Q15345 812 aa16.1■□□□□ 0.17
PCCB-215ENST00000482086 KNOP1Q1ED39 458 aaKnown RBP16.1■□□□□ 0.17
PCCB-215ENST00000482086 LHX8Q68G74 356 aa16.1■□□□□ 0.17
PCCB-215ENST00000482086 CCSAPQ6IQ19 270 aaPredicted RBP16.1■□□□□ 0.17
PCCB-215ENST00000482086 METTL13Q8N6R0 699 aa16.1■□□□□ 0.17
PCCB-215ENST00000482086 MAP7D2Q96T17 732 aa16.1■□□□□ 0.17
PCCB-215ENST00000482086 SUCLA2Q9P2R7 463 aaPredicted RBP16.1■□□□□ 0.17
PCCB-215ENST00000482086 EXOC7Q9UPT5 735 aa16.1■□□□□ 0.17
PCCB-215ENST00000482086 PDXKO00764 312 aa16.09■□□□□ 0.17
PCCB-215ENST00000482086 RPLP2P05387 115 aaKnown RBP16.09■□□□□ 0.17
PCCB-215ENST00000482086 MYBP10242 640 aa16.09■□□□□ 0.17
PCCB-215ENST00000482086 LBX1P52954 281 aa16.09■□□□□ 0.17
PCCB-215ENST00000482086 SNRPFP62306 86 aaKnown RBP16.09■□□□□ 0.17
PCCB-215ENST00000482086 IRX5P78411 483 aaPredicted RBP16.09■□□□□ 0.17
PCCB-215ENST00000482086 GTF2BQ00403 316 aa16.09■□□□□ 0.17
PCCB-215ENST00000482086 POU5F1BQ06416 359 aa16.09■□□□□ 0.17
PCCB-215ENST00000482086 NFRKBQ6P4R8 1299 aa16.09■□□□□ 0.17
PCCB-215ENST00000482086 CXCL17Q6UXB2 119 aa16.09■□□□□ 0.17
PCCB-215ENST00000482086 HAUS6Q7Z4H7 955 aa16.09■□□□□ 0.17
PCCB-215ENST00000482086 DEPTORQ8TB45 409 aa16.09■□□□□ 0.17
PCCB-215ENST00000482086 GOLGA5Q8TBA6 731 aa16.09■□□□□ 0.17
PCCB-215ENST00000482086 LMBR1Q8WVP7 490 aa16.09■□□□□ 0.17
PCCB-215ENST00000482086 TRAPPC12Q8WVT3 735 aa16.09■□□□□ 0.17
PCCB-215ENST00000482086 PRPF31Q8WWY3 499 aaKnown RBP16.09■□□□□ 0.17
PCCB-215ENST00000482086 ACCSQ96QU6 501 aa16.09■□□□□ 0.17
PCCB-215ENST00000482086 STRA6Q9BX79 667 aa16.09■□□□□ 0.17
PCCB-215ENST00000482086 SEZ6LQ9BYH1 1024 aa16.09■□□□□ 0.17
PCCB-215ENST00000482086 C2orf40Q9H1Z8 148 aa16.09■□□□□ 0.17
PCCB-215ENST00000482086 SETD4Q9NVD3 440 aa16.09■□□□□ 0.17
PCCB-215ENST00000482086 CGNQ9P2M7 1197 aaKnown RBP16.09■□□□□ 0.17
PCCB-215ENST00000482086 SMIM35A0A1B0GVV1 85 aa16.08■□□□□ 0.16
PCCB-215ENST00000482086 MBLAC1A4D2B0 266 aaPredicted RBP16.08■□□□□ 0.16
PCCB-215ENST00000482086 KBTBD13C9JR72 458 aa16.08■□□□□ 0.16
PCCB-215ENST00000482086 SLC16A4O15374 487 aa16.08■□□□□ 0.16
PCCB-215ENST00000482086 CALUO43852 315 aaPredicted RBP16.08■□□□□ 0.16
PCCB-215ENST00000482086 PPP1R37O75864 691 aa16.08■□□□□ 0.16
PCCB-215ENST00000482086 MYCNP04198 464 aaPredicted RBP16.08■□□□□ 0.16
PCCB-215ENST00000482086 GLRA2P23416 452 aa16.08■□□□□ 0.16
PCCB-215ENST00000482086 CASP5P51878 434 aa16.08■□□□□ 0.16
PCCB-215ENST00000482086 EFNA5P52803 228 aa16.08■□□□□ 0.16
PCCB-215ENST00000482086 SOX10P56693 466 aa16.08■□□□□ 0.16
PCCB-215ENST00000482086 STX17P56962 302 aa16.08■□□□□ 0.16
PCCB-215ENST00000482086 CHMP4BP1P59074 171 aa16.08■□□□□ 0.16
PCCB-215ENST00000482086 PTPN11Q06124 597 aaPredicted RBP16.08■□□□□ 0.16
PCCB-215ENST00000482086 EDRF1Q3B7T1 1238 aa16.08■□□□□ 0.16
PCCB-215ENST00000482086 HS2ST1Q7LGA3 356 aa16.08■□□□□ 0.16
PCCB-215ENST00000482086 SESTD1Q86VW0 696 aa16.08■□□□□ 0.16
PCCB-215ENST00000482086 LRRC71Q8N4P6 559 aa16.08■□□□□ 0.16
PCCB-215ENST00000482086 LINC01465Q8N7H1 131 aa16.08■□□□□ 0.16
PCCB-215ENST00000482086 TMEM161BQ8NDZ6 487 aa16.08■□□□□ 0.16
PCCB-215ENST00000482086 ANP32BQ92688 251 aaKnown RBP16.08■□□□□ 0.16
PCCB-215ENST00000482086 UNC93B1Q9H1C4 597 aa16.08■□□□□ 0.16
PCCB-215ENST00000482086 PAK6Q9NQU5 681 aaPredicted RBP16.08■□□□□ 0.16
PCCB-215ENST00000482086 TYW1Q9NV66 732 aaKnown RBP16.08■□□□□ 0.16
PCCB-215ENST00000482086 NFE2L3Q9Y4A8 694 aa16.08■□□□□ 0.16
PCCB-215ENST00000482086 LRRIQ4A6NIV6 560 aa16.07■□□□□ 0.16
PCCB-215ENST00000482086 PRPF6O94906 941 aaKnown RBP16.07■□□□□ 0.16
PCCB-215ENST00000482086 CCL5P13501 91 aa16.07■□□□□ 0.16
PCCB-215ENST00000482086 CAPN2P17655 700 aa16.07■□□□□ 0.16
PCCB-215ENST00000482086 HOXC8P31273 242 aa16.07■□□□□ 0.16
PCCB-215ENST00000482086 ACLYP53396 1101 aa16.07■□□□□ 0.16
PCCB-215ENST00000482086 LAMTOR4Q0VGL1 99 aa16.07■□□□□ 0.16
PCCB-215ENST00000482086 NCAPHQ15003 741 aa16.07■□□□□ 0.16
PCCB-215ENST00000482086 NBPF20Q3BBV1 942 aa16.07■□□□□ 0.16
PCCB-215ENST00000482086 MARCH8Q5T0T0 291 aa16.07■□□□□ 0.16
PCCB-215ENST00000482086 TTI2Q6NXR4 508 aa16.07■□□□□ 0.16
PCCB-215ENST00000482086 FAM114A1Q8IWE2 563 aa16.07■□□□□ 0.16
PCCB-215ENST00000482086 ZBTB8OSQ8IWT0 167 aa16.07■□□□□ 0.16
PCCB-215ENST00000482086 SYCP3Q8IZU3 236 aa16.07■□□□□ 0.16
PCCB-215ENST00000482086 GLIS3Q8NEA6 775 aa16.07■□□□□ 0.16
PCCB-215ENST00000482086 ASAP3Q8TDY4 903 aa16.07■□□□□ 0.16
PCCB-215ENST00000482086 BSNDQ8WZ55 320 aa16.07■□□□□ 0.16
PCCB-215ENST00000482086 GLT1D1Q96MS3 346 aa16.07■□□□□ 0.16
PCCB-215ENST00000482086 FGFBP2Q9BYJ0 223 aa16.07■□□□□ 0.16
PCCB-215ENST00000482086 RNF208Q9H0X6 261 aa16.07■□□□□ 0.16
PCCB-215ENST00000482086 KCTD10Q9H3F6 313 aa16.07■□□□□ 0.16
PCCB-215ENST00000482086 SEMA6BQ9H3T3 888 aa16.07■□□□□ 0.16
PCCB-215ENST00000482086 TMEM134Q9H6X4 195 aa16.07■□□□□ 0.16
PCCB-215ENST00000482086 ARHGAP28Q9P2N2 729 aa16.07■□□□□ 0.16
PCCB-215ENST00000482086 TRAF3IP3Q9Y228 551 aa16.07■□□□□ 0.16
PCCB-215ENST00000482086 CENPFP49454 3210 aa16.07■□□□□ 0.16
PCCB-215ENST00000482086 DENND3A2RUS2 1198 aa16.06■□□□□ 0.16
PCCB-215ENST00000482086 RPL13P26373 211 aaKnown RBP16.06■□□□□ 0.16
PCCB-215ENST00000482086 ADAM17P78536 824 aa16.06■□□□□ 0.16
PCCB-215ENST00000482086 FKBP3Q00688 224 aaKnown RBP16.06■□□□□ 0.16
PCCB-215ENST00000482086 SPAG1Q07617 926 aa16.06■□□□□ 0.16
PCCB-215ENST00000482086 STRN3Q13033 797 aa16.06■□□□□ 0.16
PCCB-215ENST00000482086 MKRN4PQ13434 485 aaPredicted RBP16.06■□□□□ 0.16
PCCB-215ENST00000482086 CAPSQ13938 189 aa16.06■□□□□ 0.16
PCCB-215ENST00000482086 ZC2HC1CQ53FD0 456 aaPredicted RBP16.06■□□□□ 0.16
PCCB-215ENST00000482086 ANKRD40Q6AI12 368 aa16.06■□□□□ 0.16
PCCB-215ENST00000482086 RHPN2Q8IUC4 686 aa16.06■□□□□ 0.16
PCCB-215ENST00000482086 NELFCDQ8IXH7 590 aa16.06■□□□□ 0.16
PCCB-215ENST00000482086 NME8Q8N427 588 aa16.06■□□□□ 0.16
PCCB-215ENST00000482086 CSGALNACT2Q8N6G5 542 aa16.06■□□□□ 0.16
PCCB-215ENST00000482086 ANKRD20A12PQ8NF67 263 aa16.06■□□□□ 0.16
PCCB-215ENST00000482086 VTI1AQ96AJ9 217 aa16.06■□□□□ 0.16
PCCB-215ENST00000482086 NFKBIZQ9BYH8 718 aa16.06■□□□□ 0.16
PCCB-215ENST00000482086 GBP3Q9H0R5 595 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms