RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 C11orf16Q9NQ32 467 aa11.8□□□□□ -0.52
SSBP1-210ENST00000481508 ANKEF1Q9NU02 776 aa11.8□□□□□ -0.52
SSBP1-210ENST00000481508 DDX19AQ9NUU7 478 aaKnown RBP11.8□□□□□ -0.52
SSBP1-210ENST00000481508 SUCLA2Q9P2R7 463 aaPredicted RBP11.8□□□□□ -0.52
SSBP1-210ENST00000481508 DAXXQ9UER7 740 aaPredicted RBP11.8□□□□□ -0.52
SSBP1-210ENST00000481508 KIAA1024Q9UPX6 916 aa11.8□□□□□ -0.52
SSBP1-210ENST00000481508 AKT3Q9Y243 479 aa11.8□□□□□ -0.52
SSBP1-210ENST00000481508 NOC2LQ9Y3T9 749 aaKnown RBP11.8□□□□□ -0.52
SSBP1-210ENST00000481508 TTC3P53804 2025 aa11.79□□□□□ -0.52
SSBP1-210ENST00000481508 KIAA1671Q9BY89 1806 aa11.79□□□□□ -0.52
SSBP1-210ENST00000481508 COL4A4P53420 1690 aaPredicted RBP11.79□□□□□ -0.52
SSBP1-210ENST00000481508 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.79□□□□□ -0.52
SSBP1-210ENST00000481508 RIOK3O14730 519 aaKnown RBP11.79□□□□□ -0.52
SSBP1-210ENST00000481508 USO1O60763 962 aaKnown RBP11.79□□□□□ -0.52
SSBP1-210ENST00000481508 CSDE1O75534 798 aaKnown RBP11.79□□□□□ -0.52
SSBP1-210ENST00000481508 FGFR4P22455 802 aa11.79□□□□□ -0.52
SSBP1-210ENST00000481508 PBX2P40425 430 aa11.79□□□□□ -0.52
SSBP1-210ENST00000481508 RFC5P40937 340 aa11.79□□□□□ -0.52
SSBP1-210ENST00000481508 GPC3P51654 580 aa11.79□□□□□ -0.52
SSBP1-210ENST00000481508 KCNQ1P51787 676 aa11.79□□□□□ -0.52
SSBP1-210ENST00000481508 RABGGTBP53611 331 aa11.79□□□□□ -0.52
SSBP1-210ENST00000481508 POLGP54098 1239 aaPredicted RBP11.79□□□□□ -0.52
SSBP1-210ENST00000481508 NLRP11P59045 1033 aaKnown RBP11.79□□□□□ -0.52
SSBP1-210ENST00000481508 WDR5P61964 334 aaKnown RBP11.79□□□□□ -0.52
SSBP1-210ENST00000481508 DNM1Q05193 864 aaKnown RBP11.79□□□□□ -0.52
SSBP1-210ENST00000481508 BECN1Q14457 450 aa11.79□□□□□ -0.52
SSBP1-210ENST00000481508 TMEM119Q4V9L6 283 aa11.79□□□□□ -0.52
SSBP1-210ENST00000481508 IER5Q5VY09 327 aa11.79□□□□□ -0.52
SSBP1-210ENST00000481508 HAUS3Q68CZ6 603 aa11.79□□□□□ -0.52
SSBP1-210ENST00000481508 TSHZ1Q6ZSZ6 1077 aa11.79□□□□□ -0.52
SSBP1-210ENST00000481508 FAM228AQ86W67 206 aa11.79□□□□□ -0.52
SSBP1-210ENST00000481508 NME8Q8N427 588 aa11.79□□□□□ -0.52
SSBP1-210ENST00000481508 LINC00301Q8NCQ3 95 aa11.79□□□□□ -0.52
SSBP1-210ENST00000481508 ERMNQ8TAM6 284 aa11.79□□□□□ -0.52
SSBP1-210ENST00000481508 ASAP3Q8TDY4 903 aa11.79□□□□□ -0.52
SSBP1-210ENST00000481508 IFIH1Q9BYX4 1025 aaKnown RBP11.79□□□□□ -0.52
SSBP1-210ENST00000481508 TMX1Q9H3N1 280 aa11.79□□□□□ -0.52
SSBP1-210ENST00000481508 POLD4Q9HCU8 107 aa11.79□□□□□ -0.52
SSBP1-210ENST00000481508 ERVK-5Q9HDB9 667 aa11.79□□□□□ -0.52
SSBP1-210ENST00000481508 GPRC5CQ9NQ84 441 aa11.79□□□□□ -0.52
SSBP1-210ENST00000481508 A0A087WZ62 844 aa11.78□□□□□ -0.52
SSBP1-210ENST00000481508 M0QZ92 97 aa11.78□□□□□ -0.52
SSBP1-210ENST00000481508 MGEA5O60502 916 aa11.78□□□□□ -0.52
SSBP1-210ENST00000481508 ARHGEF15O94989 841 aa11.78□□□□□ -0.52
SSBP1-210ENST00000481508 PARNO95453 639 aaKnown RBP11.78□□□□□ -0.52
SSBP1-210ENST00000481508 BMP15O95972 392 aa11.78□□□□□ -0.52
SSBP1-210ENST00000481508 MYOGP15173 224 aa11.78□□□□□ -0.52
SSBP1-210ENST00000481508 SLC39A14Q15043 492 aa11.78□□□□□ -0.52
SSBP1-210ENST00000481508 ZRSR1Q15695 479 aaKnown RBP11.78□□□□□ -0.52
SSBP1-210ENST00000481508 HYIQ5T013 277 aa11.78□□□□□ -0.52
SSBP1-210ENST00000481508 KRT79Q5XKE5 535 aa11.78□□□□□ -0.52
SSBP1-210ENST00000481508 MAEAQ7L5Y9 396 aa11.78□□□□□ -0.52
SSBP1-210ENST00000481508 OTUD6AQ7L8S5 288 aa11.78□□□□□ -0.52
SSBP1-210ENST00000481508 RTN4RL1Q86UN2 441 aaPredicted RBP11.78□□□□□ -0.52
SSBP1-210ENST00000481508 BSNDQ8WZ55 320 aa11.78□□□□□ -0.52
SSBP1-210ENST00000481508 SEPT8Q92599 483 aa11.78□□□□□ -0.52
SSBP1-210ENST00000481508 RNF25Q96BH1 459 aaPredicted RBP11.78□□□□□ -0.52
SSBP1-210ENST00000481508 TIFAQ96CG3 184 aa11.78□□□□□ -0.52
SSBP1-210ENST00000481508 EPSTI1Q96J88 318 aa11.78□□□□□ -0.52
SSBP1-210ENST00000481508 NACC1Q96RE7 527 aa11.78□□□□□ -0.52
SSBP1-210ENST00000481508 MAP7D2Q96T17 732 aa11.78□□□□□ -0.52
SSBP1-210ENST00000481508 GAS2L1Q99501 681 aaPredicted RBP11.78□□□□□ -0.52
SSBP1-210ENST00000481508 MTRQ99707 1265 aa11.78□□□□□ -0.52
SSBP1-210ENST00000481508 FDXACB1Q9BRP7 624 aaPredicted RBP11.78□□□□□ -0.52
SSBP1-210ENST00000481508 RAB34Q9BZG1 259 aa11.78□□□□□ -0.52
SSBP1-210ENST00000481508 DBR1Q9UK59 544 aaKnown RBP11.78□□□□□ -0.52
SSBP1-210ENST00000481508 BOLA1Q9Y3E2 137 aa11.78□□□□□ -0.52
SSBP1-210ENST00000481508 ARIH1Q9Y4X5 557 aaPredicted RBP11.78□□□□□ -0.52
SSBP1-210ENST00000481508 NLRC5Q86WI3 1866 aa11.78□□□□□ -0.52
SSBP1-210ENST00000481508 FNDC1Q4ZHG4 1894 aaPredicted RBP11.77□□□□□ -0.53
SSBP1-210ENST00000481508 A0A087X0B3 334 aa11.77□□□□□ -0.53
SSBP1-210ENST00000481508 BAIAP3O94812 1187 aa11.77□□□□□ -0.53
SSBP1-210ENST00000481508 ACTN1P12814 892 aa11.77□□□□□ -0.53
SSBP1-210ENST00000481508 XRCC6P12956 609 aaKnown RBP eCLIP11.77□□□□□ -0.53
SSBP1-210ENST00000481508 DARSP14868 501 aaKnown RBP11.77□□□□□ -0.53
SSBP1-210ENST00000481508 TMOD1P28289 359 aa11.77□□□□□ -0.53
SSBP1-210ENST00000481508 MRE11P49959 708 aa11.77□□□□□ -0.53
SSBP1-210ENST00000481508 CRYBB1P53674 252 aaPredicted RBP11.77□□□□□ -0.53
SSBP1-210ENST00000481508 KARSQ15046 597 aaKnown RBP11.77□□□□□ -0.53
SSBP1-210ENST00000481508 PADI6Q6TGC4 694 aa11.77□□□□□ -0.53
SSBP1-210ENST00000481508 CABP7Q86V35 215 aa11.77□□□□□ -0.53
SSBP1-210ENST00000481508 RHPN2Q8IUC4 686 aa11.77□□□□□ -0.53
SSBP1-210ENST00000481508 PRPF31Q8WWY3 499 aaKnown RBP11.77□□□□□ -0.53
SSBP1-210ENST00000481508 NLRP7Q8WX94 980 aa11.77□□□□□ -0.53
SSBP1-210ENST00000481508 SLC7A3Q8WY07 619 aa11.77□□□□□ -0.53
SSBP1-210ENST00000481508 NLRP4Q96MN2 994 aa11.77□□□□□ -0.53
SSBP1-210ENST00000481508 RUSC1Q9BVN2 902 aa11.77□□□□□ -0.53
SSBP1-210ENST00000481508 POLR3FQ9H1D9 316 aaPredicted RBP11.77□□□□□ -0.53
SSBP1-210ENST00000481508 BHMT2Q9H2M3 363 aa11.77□□□□□ -0.53
SSBP1-210ENST00000481508 MINDY3Q9H8M7 445 aa11.77□□□□□ -0.53
SSBP1-210ENST00000481508 ATP6V0A4Q9HBG4 840 aa11.77□□□□□ -0.53
SSBP1-210ENST00000481508 BLOC1S4Q9NUP1 217 aa11.77□□□□□ -0.53
SSBP1-210ENST00000481508 PADI3Q9ULW8 664 aa11.77□□□□□ -0.53
SSBP1-210ENST00000481508 YBX2Q9Y2T7 364 aaKnown RBP11.77□□□□□ -0.53
SSBP1-210ENST00000481508 PPME1Q9Y570 386 aa11.77□□□□□ -0.53
SSBP1-210ENST00000481508 SRPRBQ9Y5M8 271 aaKnown RBP11.77□□□□□ -0.53
SSBP1-210ENST00000481508 SLC4A7Q9Y6M7 1214 aa11.77□□□□□ -0.53
SSBP1-210ENST00000481508 MORC2Q9Y6X9 1032 aaPredicted RBP11.77□□□□□ -0.53
SSBP1-210ENST00000481508 ABHD14A-ACY1A0A1B0GW23 586 aa11.76□□□□□ -0.53
SSBP1-210ENST00000481508 ARHGEF35A5YM69 484 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 195.3 ms