RNA–Protein interactions for RNA: ENST00000480539.1

ABCF3-213, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-213ENST00000480539 RINT1Q6NUQ1 792 aa16.79■□□□□ 0.28
ABCF3-213ENST00000480539 C1orf186Q6ZWK4 172 aa16.79■□□□□ 0.28
ABCF3-213ENST00000480539 KCTD17Q8N5Z5 321 aa16.79■□□□□ 0.28
ABCF3-213ENST00000480539 SYT2Q8N9I0 419 aaPredicted RBP16.79■□□□□ 0.28
ABCF3-213ENST00000480539 USP38Q8NB14 1042 aa16.79■□□□□ 0.28
ABCF3-213ENST00000480539 LINC01599Q8WXQ3 324 aa16.79■□□□□ 0.28
ABCF3-213ENST00000480539 BSNDQ8WZ55 320 aa16.79■□□□□ 0.28
ABCF3-213ENST00000480539 ERVK-5Q9HDB9 667 aa16.79■□□□□ 0.28
ABCF3-213ENST00000480539 SLC4A7Q9Y6M7 1214 aa16.79■□□□□ 0.28
ABCF3-213ENST00000480539 SQORQ9Y6N5 450 aa16.79■□□□□ 0.28
ABCF3-213ENST00000480539 NPHP3-ACAD11A0A0J9YXS1 232 aa16.78■□□□□ 0.28
ABCF3-213ENST00000480539 ABHD14A-ACY1A0A1B0GW23 586 aa16.78■□□□□ 0.28
ABCF3-213ENST00000480539 LRRIQ4A6NIV6 560 aa16.78■□□□□ 0.28
ABCF3-213ENST00000480539 MGEA5O60502 916 aa16.78■□□□□ 0.28
ABCF3-213ENST00000480539 IBSPP21815 317 aaPredicted RBP16.78■□□□□ 0.28
ABCF3-213ENST00000480539 PHKA2P46019 1235 aa16.78■□□□□ 0.28
ABCF3-213ENST00000480539 TFDP1Q14186 410 aa16.78■□□□□ 0.28
ABCF3-213ENST00000480539 MXD4Q14582 209 aaPredicted RBP16.78■□□□□ 0.28
ABCF3-213ENST00000480539 RESP18Q5W5W9 173 aa16.78■□□□□ 0.28
ABCF3-213ENST00000480539 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.78■□□□□ 0.28
ABCF3-213ENST00000480539 TMCO2Q7Z6W1 182 aaPredicted RBP16.78■□□□□ 0.28
ABCF3-213ENST00000480539 ZNF710Q8N1W2 664 aa16.78■□□□□ 0.28
ABCF3-213ENST00000480539 SCAND2PQ9GZW5 306 aaPredicted RBP16.78■□□□□ 0.28
ABCF3-213ENST00000480539 TMX1Q9H3N1 280 aa16.78■□□□□ 0.28
ABCF3-213ENST00000480539 MINDY3Q9H8M7 445 aa16.78■□□□□ 0.28
ABCF3-213ENST00000480539 IFT122Q9HBG6 1241 aa16.78■□□□□ 0.28
ABCF3-213ENST00000480539 CHMP5Q9NZZ3 219 aa16.78■□□□□ 0.28
ABCF3-213ENST00000480539 STK17AQ9UEE5 414 aa16.78■□□□□ 0.28
ABCF3-213ENST00000480539 ST3GAL5Q9UNP4 418 aa16.78■□□□□ 0.28
ABCF3-213ENST00000480539 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.77■□□□□ 0.28
ABCF3-213ENST00000480539 GRXCR1A8MXD5 290 aa16.77■□□□□ 0.28
ABCF3-213ENST00000480539 SOX1O00570 391 aaPredicted RBP16.77■□□□□ 0.28
ABCF3-213ENST00000480539 GPR182O15218 404 aa16.77■□□□□ 0.28
ABCF3-213ENST00000480539 ASAP2O43150 1006 aa16.77■□□□□ 0.28
ABCF3-213ENST00000480539 ATP2A2P16615 1042 aaKnown RBP16.77■□□□□ 0.28
ABCF3-213ENST00000480539 SFPQP23246 707 aaKnown RBP eCLIP16.77■□□□□ 0.28
ABCF3-213ENST00000480539 CDC42EP1Q00587 391 aa16.77■□□□□ 0.28
ABCF3-213ENST00000480539 MAPK7Q13164 816 aa16.77■□□□□ 0.28
ABCF3-213ENST00000480539 NAALADL2Q58DX5 795 aa16.77■□□□□ 0.28
ABCF3-213ENST00000480539 CCDC73Q6ZRK6 1079 aa16.77■□□□□ 0.28
ABCF3-213ENST00000480539 MYOCDQ8IZQ8 938 aa16.77■□□□□ 0.28
ABCF3-213ENST00000480539 DAW1Q8N136 415 aa16.77■□□□□ 0.28
ABCF3-213ENST00000480539 KIFAP3Q92845 792 aa16.77■□□□□ 0.28
ABCF3-213ENST00000480539 KIFC3Q9BVG8 833 aa16.77■□□□□ 0.28
ABCF3-213ENST00000480539 DENND3A2RUS2 1198 aa16.76■□□□□ 0.27
ABCF3-213ENST00000480539 EFCAB14O75071 495 aa16.76■□□□□ 0.27
ABCF3-213ENST00000480539 KRT18P05783 430 aaKnown RBP16.76■□□□□ 0.27
ABCF3-213ENST00000480539 GUCY2CP25092 1073 aa16.76■□□□□ 0.27
ABCF3-213ENST00000480539 LRIT3Q3SXY7 679 aa16.76■□□□□ 0.27
ABCF3-213ENST00000480539 ARSHQ5FYA8 562 aa16.76■□□□□ 0.27
ABCF3-213ENST00000480539 ODR4Q5SWX8 454 aa16.76■□□□□ 0.27
ABCF3-213ENST00000480539 FAM117BQ6P1L5 589 aa16.76■□□□□ 0.27
ABCF3-213ENST00000480539 CATSPER4Q7RTX7 472 aa16.76■□□□□ 0.27
ABCF3-213ENST00000480539 DHX58Q96C10 678 aa16.76■□□□□ 0.27
ABCF3-213ENST00000480539 DRC1Q96MC2 740 aa16.76■□□□□ 0.27
ABCF3-213ENST00000480539 IPO9Q96P70 1041 aaKnown RBP16.76■□□□□ 0.27
ABCF3-213ENST00000480539 SLC9A7Q96T83 725 aa16.76■□□□□ 0.27
ABCF3-213ENST00000480539 REEP2Q9BRK0 252 aa16.76■□□□□ 0.27
ABCF3-213ENST00000480539 FAM13BQ9NYF5 915 aa16.76■□□□□ 0.27
ABCF3-213ENST00000480539 TCHHQ07283 1943 aa16.76■□□□□ 0.27
ABCF3-213ENST00000480539 TRIOBPQ9H2D6 2365 aa16.75■□□□□ 0.27
ABCF3-213ENST00000480539 ADGRA3Q8IWK6 1321 aa16.75■□□□□ 0.27
ABCF3-213ENST00000480539 INO80B-WBP1J3KQ70 363 aa16.75■□□□□ 0.27
ABCF3-213ENST00000480539 AMHP03971 560 aa16.75■□□□□ 0.27
ABCF3-213ENST00000480539 NAMPTP43490 491 aa16.75■□□□□ 0.27
ABCF3-213ENST00000480539 PTENP60484 403 aa16.75■□□□□ 0.27
ABCF3-213ENST00000480539 MBTD1Q05BQ5 628 aa16.75■□□□□ 0.27
ABCF3-213ENST00000480539 E2F4Q16254 413 aa16.75■□□□□ 0.27
ABCF3-213ENST00000480539 CDCA2Q69YH5 1023 aaPredicted RBP16.75■□□□□ 0.27
ABCF3-213ENST00000480539 SRGAP1Q7Z6B7 1085 aa16.75■□□□□ 0.27
ABCF3-213ENST00000480539 IFT74Q96LB3 600 aa16.75■□□□□ 0.27
ABCF3-213ENST00000480539 TIPINQ9BVW5 301 aa16.75■□□□□ 0.27
ABCF3-213ENST00000480539 FTHL17Q9BXU8 183 aa16.75■□□□□ 0.27
ABCF3-213ENST00000480539 INO80BQ9C086 356 aaPredicted RBP16.75■□□□□ 0.27
ABCF3-213ENST00000480539 KCND2Q9NZV8 630 aa16.75■□□□□ 0.27
ABCF3-213ENST00000480539 PIN4Q9Y237 131 aaKnown RBP16.75■□□□□ 0.27
ABCF3-213ENST00000480539 LAMA3Q16787 3333 aa16.75■□□□□ 0.27
ABCF3-213ENST00000480539 SFI1A8K8P3 1242 aa16.74■□□□□ 0.27
ABCF3-213ENST00000480539 PFKFB1P16118 471 aa16.74■□□□□ 0.27
ABCF3-213ENST00000480539 LIG1P18858 919 aa16.74■□□□□ 0.27
ABCF3-213ENST00000480539 RABGGTBP53611 331 aa16.74■□□□□ 0.27
ABCF3-213ENST00000480539 DMP1Q13316 513 aaPredicted RBP16.74■□□□□ 0.27
ABCF3-213ENST00000480539 PPP2R5AQ15172 486 aa16.74■□□□□ 0.27
ABCF3-213ENST00000480539 HERC6Q8IVU3 1022 aa16.74■□□□□ 0.27
ABCF3-213ENST00000480539 ZBTB8OSQ8IWT0 167 aa16.74■□□□□ 0.27
ABCF3-213ENST00000480539 DEPTORQ8TB45 409 aa16.74■□□□□ 0.27
ABCF3-213ENST00000480539 LRCH3Q96II8 777 aa16.74■□□□□ 0.27
ABCF3-213ENST00000480539 ADAM2Q99965 735 aa16.74■□□□□ 0.27
ABCF3-213ENST00000480539 TSPYL2Q9H2G4 693 aaPredicted RBP16.74■□□□□ 0.27
ABCF3-213ENST00000480539 GBF1Q92538 1859 aa16.73■□□□□ 0.27
ABCF3-213ENST00000480539 A0A1B0GVL5 298 aa16.73■□□□□ 0.27
ABCF3-213ENST00000480539 MYMKA6NI61 221 aa16.73■□□□□ 0.27
ABCF3-213ENST00000480539 CCDC169A6NNP5 214 aa16.73■□□□□ 0.27
ABCF3-213ENST00000480539 ENPP3O14638 875 aa16.73■□□□□ 0.27
ABCF3-213ENST00000480539 POLR2DO15514 142 aaKnown RBP16.73■□□□□ 0.27
ABCF3-213ENST00000480539 TBCAO75347 108 aaKnown RBP16.73■□□□□ 0.27
ABCF3-213ENST00000480539 ERLIN2O94905 339 aa16.73■□□□□ 0.27
ABCF3-213ENST00000480539 UPP2O95045 317 aa16.73■□□□□ 0.27
ABCF3-213ENST00000480539 PBX2P40425 430 aa16.73■□□□□ 0.27
ABCF3-213ENST00000480539 NPTX2P47972 431 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms