RNA–Protein interactions for RNA: ENST00000480484.5

COMMD4-203, Transcript of COMM domain containing 4, humanhuman

TSL 1 (best)

Gene COMMD4, Length 3,225 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-203ENST00000480484 RAPGEF1Q13905 1077 aa10.98□□□□□ -0.65
COMMD4-203ENST00000480484 RPS6KA1Q15418 735 aa10.98□□□□□ -0.65
COMMD4-203ENST00000480484 SBK1Q52WX2 424 aa10.98□□□□□ -0.65
COMMD4-203ENST00000480484 CABP7Q86V35 215 aa10.98□□□□□ -0.65
COMMD4-203ENST00000480484 C3orf20Q8ND61 904 aa10.98□□□□□ -0.65
COMMD4-203ENST00000480484 ZNF483Q8TF39 744 aaPredicted RBP10.98□□□□□ -0.65
COMMD4-203ENST00000480484 SPAG5Q96R06 1193 aa10.98□□□□□ -0.65
COMMD4-203ENST00000480484 LUC7LQ9NQ29 371 aaKnown RBP10.98□□□□□ -0.65
COMMD4-203ENST00000480484 AMACRQ9UHK6 382 aa10.98□□□□□ -0.65
COMMD4-203ENST00000480484 ATP8A1Q9Y2Q0 1164 aa10.98□□□□□ -0.65
COMMD4-203ENST00000480484 CCDC88AQ3V6T2 1871 aa10.98□□□□□ -0.65
COMMD4-203ENST00000480484 FLT1P17948 1338 aa10.98□□□□□ -0.65
COMMD4-203ENST00000480484 GRID2IPA4D2P6 1211 aa10.97□□□□□ -0.65
COMMD4-203ENST00000480484 KIF3CO14782 793 aa10.97□□□□□ -0.65
COMMD4-203ENST00000480484 HGSO14964 777 aaPredicted RBP10.97□□□□□ -0.65
COMMD4-203ENST00000480484 SART1O43290 800 aaKnown RBP10.97□□□□□ -0.65
COMMD4-203ENST00000480484 PPIP5K2O43314 1243 aa10.97□□□□□ -0.65
COMMD4-203ENST00000480484 TLR2O60603 784 aa10.97□□□□□ -0.65
COMMD4-203ENST00000480484 VIMP08670 466 aaKnown RBP10.97□□□□□ -0.65
COMMD4-203ENST00000480484 FAM200BP0CF97 657 aa10.97□□□□□ -0.65
COMMD4-203ENST00000480484 ECHS1P30084 290 aa10.97□□□□□ -0.65
COMMD4-203ENST00000480484 EIF6P56537 245 aaKnown RBP10.97□□□□□ -0.65
COMMD4-203ENST00000480484 GRAPQ13588 217 aa10.97□□□□□ -0.65
COMMD4-203ENST00000480484 DSG2Q14126 1118 aa10.97□□□□□ -0.65
COMMD4-203ENST00000480484 DALRD3Q5D0E6 543 aaKnown RBP10.97□□□□□ -0.65
COMMD4-203ENST00000480484 BZW1Q7L1Q6 419 aaKnown RBP10.97□□□□□ -0.65
COMMD4-203ENST00000480484 ARMC9Q7Z3E5 817 aa10.97□□□□□ -0.65
COMMD4-203ENST00000480484 CNBD1Q8NA66 436 aa10.97□□□□□ -0.65
COMMD4-203ENST00000480484 GRAPLQ8TC17 118 aaPredicted RBP10.97□□□□□ -0.65
COMMD4-203ENST00000480484 BAP1Q92560 729 aa10.97□□□□□ -0.65
COMMD4-203ENST00000480484 ELAC2Q9BQ52 826 aaKnown RBP10.97□□□□□ -0.65
COMMD4-203ENST00000480484 MMTAG2Q9BU76 263 aaKnown RBP10.97□□□□□ -0.65
COMMD4-203ENST00000480484 TCP11L1Q9NUJ3 509 aa10.97□□□□□ -0.65
COMMD4-203ENST00000480484 PANK4Q9NVE7 773 aa10.97□□□□□ -0.65
COMMD4-203ENST00000480484 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.97□□□□□ -0.652e-7■■□□□ 14.4
COMMD4-203ENST00000480484 C15orf41Q9Y2V0 281 aa10.97□□□□□ -0.65
COMMD4-203ENST00000480484 PSME4Q14997 1843 aa10.97□□□□□ -0.65
COMMD4-203ENST00000480484 LTBP1Q14766 1721 aa10.97□□□□□ -0.65
COMMD4-203ENST00000480484 C5orf60A6NFR6 353 aa10.97□□□□□ -0.65
COMMD4-203ENST00000480484 CCNT1O60563 726 aaKnown RBP10.97□□□□□ -0.65
COMMD4-203ENST00000480484 PRMT3O60678 531 aa10.97□□□□□ -0.65
COMMD4-203ENST00000480484 IFNAR2P48551 515 aa10.97□□□□□ -0.65
COMMD4-203ENST00000480484 POLR2FP61218 127 aaKnown RBP10.97□□□□□ -0.65
COMMD4-203ENST00000480484 MAN2A1Q16706 1144 aa10.97□□□□□ -0.65
COMMD4-203ENST00000480484 TRAPPC3LQ5T215 181 aa10.97□□□□□ -0.65
COMMD4-203ENST00000480484 MEI1Q5TIA1 1274 aa10.97□□□□□ -0.65
COMMD4-203ENST00000480484 SFMBT2Q5VUG0 894 aa10.97□□□□□ -0.65
COMMD4-203ENST00000480484 CAPRIN2Q6IMN6 1127 aaKnown RBP10.97□□□□□ -0.65
COMMD4-203ENST00000480484 ADAT2Q7Z6V5 191 aaKnown RBP10.97□□□□□ -0.65
COMMD4-203ENST00000480484 CHPFQ8IZ52 775 aa10.97□□□□□ -0.65
COMMD4-203ENST00000480484 AGAP11Q8TF27 550 aa10.97□□□□□ -0.65
COMMD4-203ENST00000480484 ZBTB10Q96DT7 871 aa10.97□□□□□ -0.65
COMMD4-203ENST00000480484 XPO6Q96QU8 1125 aaKnown RBP10.97□□□□□ -0.65
COMMD4-203ENST00000480484 YIPF3Q9GZM5 350 aa10.97□□□□□ -0.65
COMMD4-203ENST00000480484 MKNK2Q9HBH9 465 aa10.97□□□□□ -0.65
COMMD4-203ENST00000480484 MAD2L2Q9UI95 211 aa10.97□□□□□ -0.65
COMMD4-203ENST00000480484 STX8Q9UNK0 236 aa10.97□□□□□ -0.65
COMMD4-203ENST00000480484 TRPC6Q9Y210 931 aa10.97□□□□□ -0.65
COMMD4-203ENST00000480484 MAST2Q6P0Q8 1798 aa10.97□□□□□ -0.65
COMMD4-203ENST00000480484 MMEP08473 750 aa10.97□□□□□ -0.65
COMMD4-203ENST00000480484 PCP11498 1178 aaKnown RBP10.97□□□□□ -0.65
COMMD4-203ENST00000480484 TXKP42681 527 aa10.97□□□□□ -0.65
COMMD4-203ENST00000480484 CUL1Q13616 776 aa10.97□□□□□ -0.65
COMMD4-203ENST00000480484 LLGL1Q15334 1064 aa10.97□□□□□ -0.65
COMMD4-203ENST00000480484 MAPRE1Q15691 268 aaKnown RBP10.97□□□□□ -0.65
COMMD4-203ENST00000480484 NAB2Q15742 525 aa10.97□□□□□ -0.65
COMMD4-203ENST00000480484 HGSNATQ68CP4 663 aa10.97□□□□□ -0.65
COMMD4-203ENST00000480484 PRR5LQ6MZQ0 368 aa10.97□□□□□ -0.65
COMMD4-203ENST00000480484 USP17L2Q6R6M4 530 aa10.97□□□□□ -0.65
COMMD4-203ENST00000480484 FAM167BQ9BTA0 163 aa10.97□□□□□ -0.65
COMMD4-203ENST00000480484 CCDC113Q9H0I3 377 aa10.97□□□□□ -0.65
COMMD4-203ENST00000480484 DCTN4Q9UJW0 460 aa10.97□□□□□ -0.65
COMMD4-203ENST00000480484 STK38LQ9Y2H1 464 aa10.97□□□□□ -0.65
COMMD4-203ENST00000480484 MRPS23Q9Y3D9 190 aaKnown RBP10.97□□□□□ -0.65
COMMD4-203ENST00000480484 CD2APQ9Y5K6 639 aa10.97□□□□□ -0.65
COMMD4-203ENST00000480484 A0A087X0T9 212 aa10.96□□□□□ -0.65
COMMD4-203ENST00000480484 KRIT1O00522 736 aa10.96□□□□□ -0.65
COMMD4-203ENST00000480484 UPP2O95045 317 aa10.96□□□□□ -0.65
COMMD4-203ENST00000480484 FAM228BP0C875 321 aa10.96□□□□□ -0.65
COMMD4-203ENST00000480484 ACTN1P12814 892 aa10.96□□□□□ -0.65
COMMD4-203ENST00000480484 INO80DQ53TQ3 878 aaPredicted RBP10.96□□□□□ -0.65
COMMD4-203ENST00000480484 CNNM4Q6P4Q7 775 aa10.96□□□□□ -0.65
COMMD4-203ENST00000480484 KSR1Q8IVT5 923 aa10.96□□□□□ -0.65
COMMD4-203ENST00000480484 NELFCDQ8IXH7 590 aa10.96□□□□□ -0.65
COMMD4-203ENST00000480484 PARD3BQ8TEW8 1205 aa10.96□□□□□ -0.65
COMMD4-203ENST00000480484 PRCCQ92733 491 aaPredicted RBP10.96□□□□□ -0.65
COMMD4-203ENST00000480484 SAAL1Q96ER3 474 aa10.96□□□□□ -0.65
COMMD4-203ENST00000480484 SRPK1Q96SB4 655 aaKnown RBP10.96□□□□□ -0.65
COMMD4-203ENST00000480484 CELF4Q9BZC1 486 aaKnown RBP10.96□□□□□ -0.65
COMMD4-203ENST00000480484 SAMD15Q9P1V8 674 aa10.96□□□□□ -0.65
COMMD4-203ENST00000480484 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.96□□□□□ -0.66
COMMD4-203ENST00000480484 FOXO6A8MYZ6 492 aa10.96□□□□□ -0.66
COMMD4-203ENST00000480484 CAND2O75155 1236 aa10.96□□□□□ -0.66
COMMD4-203ENST00000480484 UFL1O94874 794 aa10.96□□□□□ -0.66
COMMD4-203ENST00000480484 KRT18P05783 430 aaKnown RBP10.96□□□□□ -0.66
COMMD4-203ENST00000480484 TSPY3P0CV98 308 aa10.96□□□□□ -0.66
COMMD4-203ENST00000480484 TSPY8P0CW00 308 aa10.96□□□□□ -0.66
COMMD4-203ENST00000480484 CHN1P15882 459 aa10.96□□□□□ -0.66
COMMD4-203ENST00000480484 GRIK3Q13003 919 aa10.96□□□□□ -0.66
COMMD4-203ENST00000480484 ASTE1Q2TB18 679 aaPredicted RBP10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms