RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 ERMNQ8TAM6 284 aa10.12□□□□□ -0.79
VCP-206ENST00000480327 CLIC6Q96NY7 704 aa10.12□□□□□ -0.79
VCP-206ENST00000480327 PLIN2Q99541 437 aa10.12□□□□□ -0.79
VCP-206ENST00000480327 LXNQ9BS40 222 aa10.12□□□□□ -0.79
VCP-206ENST00000480327 RAB34Q9BZG1 259 aa10.12□□□□□ -0.79
VCP-206ENST00000480327 CSRNP2Q9H175 543 aa10.12□□□□□ -0.79
VCP-206ENST00000480327 CHMP5Q9NZZ3 219 aa10.12□□□□□ -0.79
VCP-206ENST00000480327 TUBE1Q9UJT0 475 aa10.12□□□□□ -0.79
VCP-206ENST00000480327 FBXO2Q9UK22 296 aaPredicted RBP10.12□□□□□ -0.79
VCP-206ENST00000480327 CFAP45Q9UL16 551 aa10.12□□□□□ -0.79
VCP-206ENST00000480327 CDY2AQ9Y6F7 541 aa10.12□□□□□ -0.79
VCP-206ENST00000480327 MBTPS2O43462 519 aa10.11□□□□□ -0.79
VCP-206ENST00000480327 DCXO43602 365 aa10.11□□□□□ -0.79
VCP-206ENST00000480327 OATP04181 439 aa10.11□□□□□ -0.79
VCP-206ENST00000480327 RB1P06400 928 aa10.11□□□□□ -0.79
VCP-206ENST00000480327 P4HBP07237 508 aaKnown RBP10.11□□□□□ -0.79
VCP-206ENST00000480327 SPATA31C1P0DKV0 1188 aa10.11□□□□□ -0.79
VCP-206ENST00000480327 CD52P31358 61 aa10.11□□□□□ -0.79
VCP-206ENST00000480327 GATMP50440 423 aa10.11□□□□□ -0.79
VCP-206ENST00000480327 KRT85P78386 507 aa10.11□□□□□ -0.79
VCP-206ENST00000480327 PDIA5Q14554 519 aa10.11□□□□□ -0.79
VCP-206ENST00000480327 SMAD2Q15796 467 aaKnown RBP10.11□□□□□ -0.79
VCP-206ENST00000480327 ECM1Q16610 540 aa10.11□□□□□ -0.79
VCP-206ENST00000480327 PLA2G4FQ68DD2 849 aa10.11□□□□□ -0.79
VCP-206ENST00000480327 TAF2Q6P1X5 1199 aa10.11□□□□□ -0.79
VCP-206ENST00000480327 TSHZ1Q6ZSZ6 1077 aa10.11□□□□□ -0.79
VCP-206ENST00000480327 ADGRD2Q7Z7M1 963 aa10.11□□□□□ -0.79
VCP-206ENST00000480327 CATSPER3Q86XQ3 398 aa10.11□□□□□ -0.79
VCP-206ENST00000480327 ADHFE1Q8IWW8 467 aa10.11□□□□□ -0.79
VCP-206ENST00000480327 SNX29Q8TEQ0 813 aa10.11□□□□□ -0.79
VCP-206ENST00000480327 PIGOQ8TEQ8 1089 aa10.11□□□□□ -0.79
VCP-206ENST00000480327 ATP8B4Q8TF62 1192 aa10.11□□□□□ -0.79
VCP-206ENST00000480327 HSD17B14Q9BPX1 270 aa10.11□□□□□ -0.79
VCP-206ENST00000480327 GDPD2Q9HCC8 539 aa10.11□□□□□ -0.79
VCP-206ENST00000480327 ALG13Q9NP73 1137 aaKnown RBP10.11□□□□□ -0.79
VCP-206ENST00000480327 NRBP2Q9NSY0 501 aa10.11□□□□□ -0.79
VCP-206ENST00000480327 PRKAG3Q9UGI9 489 aa10.11□□□□□ -0.79
VCP-206ENST00000480327 SEPT9Q9UHD8 586 aaPredicted RBP10.11□□□□□ -0.79
VCP-206ENST00000480327 CIZ1Q9ULV3 898 aaPredicted RBP10.11□□□□□ -0.79
VCP-206ENST00000480327 ATP6V1DQ9Y5K8 247 aa10.11□□□□□ -0.79
VCP-206ENST00000480327 SRPRBQ9Y5M8 271 aaKnown RBP10.11□□□□□ -0.79
VCP-206ENST00000480327 MRPL42Q9Y6G3 142 aaKnown RBP10.11□□□□□ -0.79
VCP-206ENST00000480327 HBP1O60381 514 aa10.1□□□□□ -0.79
VCP-206ENST00000480327 CSPG5O95196 566 aa10.1□□□□□ -0.79
VCP-206ENST00000480327 STBD1O95210 358 aa10.1□□□□□ -0.79
VCP-206ENST00000480327 YEATS4O95619 227 aa10.1□□□□□ -0.79
VCP-206ENST00000480327 ITGB1P05556 798 aa10.1□□□□□ -0.79
VCP-206ENST00000480327 ALADP13716 330 aa10.1□□□□□ -0.79
VCP-206ENST00000480327 ME1P48163 572 aa10.1□□□□□ -0.79
VCP-206ENST00000480327 SLC26A2P50443 739 aa10.1□□□□□ -0.79
VCP-206ENST00000480327 NPEPPSP55786 919 aa10.1□□□□□ -0.79
VCP-206ENST00000480327 MRPS6P82932 125 aaKnown RBP10.1□□□□□ -0.79
VCP-206ENST00000480327 TMEM62Q0P6H9 643 aa10.1□□□□□ -0.79
VCP-206ENST00000480327 ADAM15Q13444 863 aa10.1□□□□□ -0.79
VCP-206ENST00000480327 BTG3Q14201 252 aaPredicted RBP10.1□□□□□ -0.79
VCP-206ENST00000480327 MTERF2Q49AM1 385 aa10.1□□□□□ -0.79
VCP-206ENST00000480327 XKR3Q5GH77 459 aa10.1□□□□□ -0.79
VCP-206ENST00000480327 KRT79Q5XKE5 535 aa10.1□□□□□ -0.79
VCP-206ENST00000480327 ATL3Q6DD88 541 aa10.1□□□□□ -0.79
VCP-206ENST00000480327 POTEGQ6S5H5 508 aa10.1□□□□□ -0.79
VCP-206ENST00000480327 EP400NLQ6ZTU2 488 aa10.1□□□□□ -0.79
VCP-206ENST00000480327 USP49Q70CQ1 688 aa10.1□□□□□ -0.79
VCP-206ENST00000480327 ALYREFQ86V81 257 aaKnown RBP10.1□□□□□ -0.79
VCP-206ENST00000480327 KRI1Q8N9T8 703 aaKnown RBP10.1□□□□□ -0.79
VCP-206ENST00000480327 ZNF579Q8NAF0 562 aaKnown RBP10.1□□□□□ -0.79
VCP-206ENST00000480327 BBXQ8WY36 941 aaPredicted RBP10.1□□□□□ -0.79
VCP-206ENST00000480327 EPSTI1Q96J88 318 aa10.1□□□□□ -0.79
VCP-206ENST00000480327 MSLNLQ96KJ4 702 aa10.1□□□□□ -0.79
VCP-206ENST00000480327 SPATA32Q96LK8 384 aa10.1□□□□□ -0.79
VCP-206ENST00000480327 MMTAG2Q9BU76 263 aaKnown RBP10.1□□□□□ -0.79
VCP-206ENST00000480327 C11orf84Q9BUA3 381 aaPredicted RBP10.1□□□□□ -0.79
VCP-206ENST00000480327 POLR3CQ9BUI4 534 aaPredicted RBP10.1□□□□□ -0.79
VCP-206ENST00000480327 LMAN2LQ9H0V9 348 aa10.1□□□□□ -0.79
VCP-206ENST00000480327 TMX1Q9H3N1 280 aa10.1□□□□□ -0.79
VCP-206ENST00000480327 ZSWIM4Q9H7M6 989 aa10.1□□□□□ -0.79
VCP-206ENST00000480327 TUFT1Q9NNX1 390 aa10.1□□□□□ -0.79
VCP-206ENST00000480327 BMP2KQ9NSY1 1161 aaPredicted RBP10.1□□□□□ -0.79
VCP-206ENST00000480327 CLEC1BQ9P126 229 aa10.1□□□□□ -0.79
VCP-206ENST00000480327 PLAGL2Q9UPG8 496 aa10.1□□□□□ -0.79
VCP-206ENST00000480327 KIAA1024Q9UPX6 916 aa10.1□□□□□ -0.79
VCP-206ENST00000480327 PCDHGC5Q9Y5F6 944 aa10.1□□□□□ -0.79
VCP-206ENST00000480327 RRN3P2A6NIE6 340 aa10.09□□□□□ -0.79
VCP-206ENST00000480327 ZBTB42B2RXF5 422 aa10.09□□□□□ -0.79
VCP-206ENST00000480327 DKC1O60832 514 aaKnown RBP eCLIP10.09□□□□□ -0.79
VCP-206ENST00000480327 GLP2RO95838 553 aa10.09□□□□□ -0.79
VCP-206ENST00000480327 KLRC1P26715 233 aa10.09□□□□□ -0.79
VCP-206ENST00000480327 RPA1P27694 616 aa10.09□□□□□ -0.79
VCP-206ENST00000480327 YWHABP31946 246 aaKnown RBP10.09□□□□□ -0.79
VCP-206ENST00000480327 LONP1P36776 959 aaKnown RBP10.09□□□□□ -0.79
VCP-206ENST00000480327 UBA7P41226 1012 aa10.09□□□□□ -0.79
VCP-206ENST00000480327 XKR9Q5GH70 373 aa10.09□□□□□ -0.79
VCP-206ENST00000480327 HAUS3Q68CZ6 603 aa10.09□□□□□ -0.79
VCP-206ENST00000480327 HFE2Q6ZVN8 426 aa10.09□□□□□ -0.79
VCP-206ENST00000480327 ANO5Q75V66 913 aa10.09□□□□□ -0.79
VCP-206ENST00000480327 CABP7Q86V35 215 aa10.09□□□□□ -0.79
VCP-206ENST00000480327 C4orf19Q8IY42 314 aa10.09□□□□□ -0.79
VCP-206ENST00000480327 RASSF8Q8NHQ8 419 aa10.09□□□□□ -0.79
VCP-206ENST00000480327 SPPL3Q8TCT6 385 aa10.09□□□□□ -0.79
VCP-206ENST00000480327 KCNG4Q8TDN1 519 aa10.09□□□□□ -0.79
VCP-206ENST00000480327 LEO1Q8WVC0 666 aaPredicted RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms