RNA–Protein interactions for RNA: ENST00000480209.1

NUDCD3-208, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-208ENST00000480209 OLFML3Q9NRN5 406 aa9.91□□□□□ -0.82
NUDCD3-208ENST00000480209 TRMT13Q9NUP7 481 aaKnown RBP9.91□□□□□ -0.82
NUDCD3-208ENST00000480209 MAPK8IP1Q9UQF2 711 aa9.91□□□□□ -0.82
NUDCD3-208ENST00000480209 COL4A3BPQ9Y5P4 624 aa9.91□□□□□ -0.82
NUDCD3-208ENST00000480209 DNAH12Q6ZR08 3092 aa9.91□□□□□ -0.82
NUDCD3-208ENST00000480209 A0A0U1RQG5 324 aaPredicted RBP9.9□□□□□ -0.82
NUDCD3-208ENST00000480209 SMIM35A0A1B0GVV1 85 aa9.9□□□□□ -0.82
NUDCD3-208ENST00000480209 K7ENM7 598 aa9.9□□□□□ -0.82
NUDCD3-208ENST00000480209 SLC16A4O15374 487 aa9.9□□□□□ -0.82
NUDCD3-208ENST00000480209 MAGEB2O15479 319 aa9.9□□□□□ -0.82
NUDCD3-208ENST00000480209 GAS2O43903 313 aaKnown RBP9.9□□□□□ -0.82
NUDCD3-208ENST00000480209 TFRCP02786 760 aaKnown RBP9.9□□□□□ -0.82
NUDCD3-208ENST00000480209 CYP2C9P11712 490 aa9.9□□□□□ -0.82
NUDCD3-208ENST00000480209 PRCPP42785 496 aa9.9□□□□□ -0.82
NUDCD3-208ENST00000480209 CDK7P50613 346 aa9.9□□□□□ -0.82
NUDCD3-208ENST00000480209 GPC3P51654 580 aa9.9□□□□□ -0.82
NUDCD3-208ENST00000480209 RTP1P59025 263 aa9.9□□□□□ -0.82
NUDCD3-208ENST00000480209 TMEM62Q0P6H9 643 aa9.9□□□□□ -0.82
NUDCD3-208ENST00000480209 TRIM71Q2Q1W2 868 aaKnown RBP9.9□□□□□ -0.82
NUDCD3-208ENST00000480209 ANO6Q4KMQ2 910 aa9.9□□□□□ -0.82
NUDCD3-208ENST00000480209 CDCA2Q69YH5 1023 aaPredicted RBP9.9□□□□□ -0.82
NUDCD3-208ENST00000480209 SASS6Q6UVJ0 657 aa9.9□□□□□ -0.82
NUDCD3-208ENST00000480209 LRSAM1Q6UWE0 723 aa9.9□□□□□ -0.82
NUDCD3-208ENST00000480209 SERINC5Q86VE9 423 aa9.9□□□□□ -0.82
NUDCD3-208ENST00000480209 RHPN2Q8IUC4 686 aa9.9□□□□□ -0.82
NUDCD3-208ENST00000480209 FAM126BQ8IXS8 530 aa9.9□□□□□ -0.82
NUDCD3-208ENST00000480209 TMEM161BQ8NDZ6 487 aa9.9□□□□□ -0.82
NUDCD3-208ENST00000480209 SCFD1Q8WVM8 642 aa9.9□□□□□ -0.82
NUDCD3-208ENST00000480209 DNAJB3Q8WWF6 145 aa9.9□□□□□ -0.82
NUDCD3-208ENST00000480209 PSPC1Q8WXF1 523 aaKnown RBP9.9□□□□□ -0.82
NUDCD3-208ENST00000480209 NLRP4Q96MN2 994 aa9.9□□□□□ -0.82
NUDCD3-208ENST00000480209 CCDC113Q9H0I3 377 aa9.9□□□□□ -0.82
NUDCD3-208ENST00000480209 TRPV6Q9H1D0 765 aa9.9□□□□□ -0.82
NUDCD3-208ENST00000480209 MINDY3Q9H8M7 445 aa9.9□□□□□ -0.82
NUDCD3-208ENST00000480209 MRPL44Q9H9J2 332 aaKnown RBP9.9□□□□□ -0.82
NUDCD3-208ENST00000480209 CDHR5Q9HBB8 845 aa9.9□□□□□ -0.82
NUDCD3-208ENST00000480209 RMND1Q9NWS8 449 aa9.9□□□□□ -0.82
NUDCD3-208ENST00000480209 SUCLA2Q9P2R7 463 aaPredicted RBP9.9□□□□□ -0.82
NUDCD3-208ENST00000480209 SEL1LQ9UBV2 794 aa9.9□□□□□ -0.82
NUDCD3-208ENST00000480209 PDCD11Q14690 1871 aaKnown RBP9.89□□□□□ -0.83
NUDCD3-208ENST00000480209 RALGAPA2Q2PPJ7 1873 aa9.89□□□□□ -0.83
NUDCD3-208ENST00000480209 TET1Q8NFU7 2136 aa9.89□□□□□ -0.83
NUDCD3-208ENST00000480209 TRIP11Q15643 1979 aa9.89□□□□□ -0.83
NUDCD3-208ENST00000480209 A0A087WZ62 844 aa9.89□□□□□ -0.83
NUDCD3-208ENST00000480209 TRIM49BA6NDI0 452 aa9.89□□□□□ -0.83
NUDCD3-208ENST00000480209 LRRIQ4A6NIV6 560 aa9.89□□□□□ -0.83
NUDCD3-208ENST00000480209 TTLL13PA6NNM8 815 aa9.89□□□□□ -0.83
NUDCD3-208ENST00000480209 TISP43B9A030 160 aa9.89□□□□□ -0.83
NUDCD3-208ENST00000480209 ARVCFO00192 962 aa9.89□□□□□ -0.83
NUDCD3-208ENST00000480209 GPR32O75388 356 aa9.89□□□□□ -0.83
NUDCD3-208ENST00000480209 PRPF6O94906 941 aaKnown RBP9.89□□□□□ -0.83
NUDCD3-208ENST00000480209 LETM1O95202 739 aaPredicted RBP9.89□□□□□ -0.83
NUDCD3-208ENST00000480209 GCNT3O95395 438 aa9.89□□□□□ -0.83
NUDCD3-208ENST00000480209 MAPTP10636 758 aaKnown RBP9.89□□□□□ -0.83
NUDCD3-208ENST00000480209 NAMPTP43490 491 aa9.89□□□□□ -0.83
NUDCD3-208ENST00000480209 ATN1P54259 1190 aaPredicted RBP9.89□□□□□ -0.83
NUDCD3-208ENST00000480209 PMS1P54277 932 aaKnown RBP9.89□□□□□ -0.83
NUDCD3-208ENST00000480209 PTPN11Q06124 597 aaPredicted RBP9.89□□□□□ -0.83
NUDCD3-208ENST00000480209 DMP1Q13316 513 aaPredicted RBP9.89□□□□□ -0.83
NUDCD3-208ENST00000480209 SNX17Q15036 470 aa9.89□□□□□ -0.83
NUDCD3-208ENST00000480209 PTGISQ16647 500 aa9.89□□□□□ -0.83
NUDCD3-208ENST00000480209 COL13A1Q5TAT6 717 aaPredicted RBP9.89□□□□□ -0.83
NUDCD3-208ENST00000480209 IER5Q5VY09 327 aa9.89□□□□□ -0.83
NUDCD3-208ENST00000480209 UBE2Q1Q7Z7E8 422 aa9.89□□□□□ -0.83
NUDCD3-208ENST00000480209 FAM178BQ8IXR5 827 aa9.89□□□□□ -0.83
NUDCD3-208ENST00000480209 ADSSL1Q8N142 457 aa9.89□□□□□ -0.83
NUDCD3-208ENST00000480209 ANKLE1Q8NAG6 615 aa9.89□□□□□ -0.83
NUDCD3-208ENST00000480209 RNF149Q8NC42 400 aa9.89□□□□□ -0.83
NUDCD3-208ENST00000480209 RETREG2Q8NC44 543 aa9.89□□□□□ -0.83
NUDCD3-208ENST00000480209 TMEM40Q8WWA1 233 aa9.89□□□□□ -0.83
NUDCD3-208ENST00000480209 SPIRE2Q8WWL2 714 aa9.89□□□□□ -0.83
NUDCD3-208ENST00000480209 TCP11Q8WWU5 503 aa9.89□□□□□ -0.83
NUDCD3-208ENST00000480209 VTI1AQ96AJ9 217 aa9.89□□□□□ -0.83
NUDCD3-208ENST00000480209 FDXACB1Q9BRP7 624 aaPredicted RBP9.89□□□□□ -0.83
NUDCD3-208ENST00000480209 OSBPL7Q9BZF2 842 aa9.89□□□□□ -0.83
NUDCD3-208ENST00000480209 SENP6Q9GZR1 1112 aaPredicted RBP9.89□□□□□ -0.83
NUDCD3-208ENST00000480209 IFT122Q9HBG6 1241 aa9.89□□□□□ -0.83
NUDCD3-208ENST00000480209 PCDH10Q9P2E7 1040 aa9.89□□□□□ -0.83
NUDCD3-208ENST00000480209 LARSQ9P2J5 1176 aaKnown RBP9.89□□□□□ -0.83
NUDCD3-208ENST00000480209 ARHGAP28Q9P2N2 729 aa9.89□□□□□ -0.83
NUDCD3-208ENST00000480209 CTNND2Q9UQB3 1225 aa9.89□□□□□ -0.83
NUDCD3-208ENST00000480209 AKT3Q9Y243 479 aa9.89□□□□□ -0.83
NUDCD3-208ENST00000480209 USP20Q9Y2K6 914 aa9.89□□□□□ -0.83
NUDCD3-208ENST00000480209 PHLPP2Q6ZVD8 1323 aa9.88□□□□□ -0.83
NUDCD3-208ENST00000480209 CCDC169A6NNP5 214 aa9.88□□□□□ -0.83
NUDCD3-208ENST00000480209 CSDE1O75534 798 aaKnown RBP9.88□□□□□ -0.83
NUDCD3-208ENST00000480209 CD4P01730 458 aa9.88□□□□□ -0.83
NUDCD3-208ENST00000480209 CTSHP09668 335 aa9.88□□□□□ -0.83
NUDCD3-208ENST00000480209 IQCF3P0C7M6 154 aa9.88□□□□□ -0.83
NUDCD3-208ENST00000480209 CCDC192P0DO97 292 aa9.88□□□□□ -0.83
NUDCD3-208ENST00000480209 EN2P19622 333 aaPredicted RBP9.88□□□□□ -0.83
NUDCD3-208ENST00000480209 NLRP11P59045 1033 aaKnown RBP9.88□□□□□ -0.83
NUDCD3-208ENST00000480209 MBTD1Q05BQ5 628 aa9.88□□□□□ -0.83
NUDCD3-208ENST00000480209 MGAT3Q09327 533 aa9.88□□□□□ -0.83
NUDCD3-208ENST00000480209 PSMD2Q13200 908 aa9.88□□□□□ -0.83
NUDCD3-208ENST00000480209 BMT2Q1RMZ1 405 aa9.88□□□□□ -0.83
NUDCD3-208ENST00000480209 KIZQ2M2Z5 673 aa9.88□□□□□ -0.83
NUDCD3-208ENST00000480209 TRIM60Q495X7 471 aa9.88□□□□□ -0.83
NUDCD3-208ENST00000480209 COBLL1Q53SF7 1204 aa9.88□□□□□ -0.83
NUDCD3-208ENST00000480209 KLHL10Q6JEL2 608 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms