RNA–Protein interactions for RNA: ENST00000480022.1

CHD6-208, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 2,829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-208ENST00000480022 O00370 1275 aa11.74□□□□□ -0.53
CHD6-208ENST00000480022 CES2O00748 559 aa11.74□□□□□ -0.53
CHD6-208ENST00000480022 DAPK3O43293 454 aa11.74□□□□□ -0.53
CHD6-208ENST00000480022 SPDYE6P0CI01 402 aa11.74□□□□□ -0.53
CHD6-208ENST00000480022 DLGAP5Q15398 846 aa11.74□□□□□ -0.53
CHD6-208ENST00000480022 CCDC178Q5BJE1 867 aa11.74□□□□□ -0.53
CHD6-208ENST00000480022 MIIPQ5JXC2 388 aa11.74□□□□□ -0.53
CHD6-208ENST00000480022 SPDYCQ5MJ68 293 aa11.74□□□□□ -0.53
CHD6-208ENST00000480022 LCA5Q86VQ0 697 aa11.74□□□□□ -0.53
CHD6-208ENST00000480022 LONP2Q86WA8 852 aa11.74□□□□□ -0.53
CHD6-208ENST00000480022 CRACR2BQ8N4Y2 399 aaPredicted RBP11.74□□□□□ -0.53
CHD6-208ENST00000480022 MTMR14Q8NCE2 650 aa11.74□□□□□ -0.53
CHD6-208ENST00000480022 SCFD2Q8WU76 684 aa11.74□□□□□ -0.53
CHD6-208ENST00000480022 PGM2Q96G03 612 aa11.74□□□□□ -0.53
CHD6-208ENST00000480022 ZBED3Q96IU2 234 aaPredicted RBP11.74□□□□□ -0.53
CHD6-208ENST00000480022 PRMT6Q96LA8 375 aaPredicted RBP11.74□□□□□ -0.53
CHD6-208ENST00000480022 NDNQ99608 321 aa11.74□□□□□ -0.53
CHD6-208ENST00000480022 DUSP9Q99956 384 aaKnown RBP11.74□□□□□ -0.53
CHD6-208ENST00000480022 CYP39A1Q9NYL5 469 aa11.74□□□□□ -0.53
CHD6-208ENST00000480022 PNMA3Q9UL41 463 aa11.74□□□□□ -0.53
CHD6-208ENST00000480022 PPME1Q9Y570 386 aa11.74□□□□□ -0.53
CHD6-208ENST00000480022 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.74□□□□□ -0.53
CHD6-208ENST00000480022 MAST2Q6P0Q8 1798 aa11.74□□□□□ -0.53
CHD6-208ENST00000480022 MAGEB6P1A0A0J9YX57 407 aa11.74□□□□□ -0.53
CHD6-208ENST00000480022 POTECB2RU33 542 aa11.74□□□□□ -0.53
CHD6-208ENST00000480022 PEX11AO75192 247 aa11.74□□□□□ -0.53
CHD6-208ENST00000480022 MBD4O95243 580 aa11.74□□□□□ -0.53
CHD6-208ENST00000480022 TPBGLP0DKB5 382 aa11.74□□□□□ -0.53
CHD6-208ENST00000480022 SKIV2L2P42285 1042 aaKnown RBP11.74□□□□□ -0.53
CHD6-208ENST00000480022 IFNAR2P48551 515 aa11.74□□□□□ -0.53
CHD6-208ENST00000480022 LMNB2Q03252 620 aa11.74□□□□□ -0.53
CHD6-208ENST00000480022 NID2Q14112 1375 aa11.74□□□□□ -0.53
CHD6-208ENST00000480022 ENOX2Q16206 610 aaKnown RBP11.74□□□□□ -0.53
CHD6-208ENST00000480022 TBC1D10BQ4KMP7 808 aaPredicted RBP11.74□□□□□ -0.53
CHD6-208ENST00000480022 RRAGAQ7L523 313 aa11.74□□□□□ -0.53
CHD6-208ENST00000480022 TRIM42Q8IWZ5 723 aa11.74□□□□□ -0.53
CHD6-208ENST00000480022 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.74□□□□□ -0.53
CHD6-208ENST00000480022 CXorf38Q8TB03 319 aa11.74□□□□□ -0.53
CHD6-208ENST00000480022 TRPM4Q8TD43 1214 aa11.74□□□□□ -0.53
CHD6-208ENST00000480022 RXFP1Q9HBX9 757 aa11.74□□□□□ -0.53
CHD6-208ENST00000480022 LUC7LQ9NQ29 371 aaKnown RBP11.74□□□□□ -0.53
CHD6-208ENST00000480022 LRRC53A6NM62 1247 aa11.73□□□□□ -0.53
CHD6-208ENST00000480022 PENKP01210 267 aaPredicted RBP11.73□□□□□ -0.53
CHD6-208ENST00000480022 KRT2P35908 639 aa11.73□□□□□ -0.53
CHD6-208ENST00000480022 RHBDL3P58872 404 aa11.73□□□□□ -0.53
CHD6-208ENST00000480022 PPP4CP60510 307 aa11.73□□□□□ -0.53
CHD6-208ENST00000480022 PTGDRQ13258 359 aa11.73□□□□□ -0.53
CHD6-208ENST00000480022 NAB2Q15742 525 aa11.73□□□□□ -0.53
CHD6-208ENST00000480022 ASTE1Q2TB18 679 aaPredicted RBP11.73□□□□□ -0.53
CHD6-208ENST00000480022 EARS2Q5JPH6 523 aaKnown RBP11.73□□□□□ -0.53
CHD6-208ENST00000480022 LCORLQ8N3X6 602 aa11.73□□□□□ -0.53
CHD6-208ENST00000480022 PIGOQ8TEQ8 1089 aa11.73□□□□□ -0.53
CHD6-208ENST00000480022 DYDC1Q8WWB3 177 aa11.73□□□□□ -0.53
CHD6-208ENST00000480022 ARMT1Q9H993 441 aa11.73□□□□□ -0.53
CHD6-208ENST00000480022 TMEM165Q9HC07 324 aa11.73□□□□□ -0.53
CHD6-208ENST00000480022 FAM207AQ9NSI2 230 aaPredicted RBP11.73□□□□□ -0.53
CHD6-208ENST00000480022 CTTNBP2NLQ9P2B4 639 aa11.73□□□□□ -0.53
CHD6-208ENST00000480022 HACL1Q9UJ83 578 aa11.73□□□□□ -0.53
CHD6-208ENST00000480022 SSU72P8A0A1W2PR75 194 aa11.73□□□□□ -0.53
CHD6-208ENST00000480022 WNT10BO00744 389 aa11.73□□□□□ -0.53
CHD6-208ENST00000480022 CCNB1P14635 433 aa11.73□□□□□ -0.53
CHD6-208ENST00000480022 XBP1P17861 261 aa11.73□□□□□ -0.53
CHD6-208ENST00000480022 ATP2C1P98194 919 aaPredicted RBP11.73□□□□□ -0.53
CHD6-208ENST00000480022 TTC38Q5R3I4 469 aa11.73□□□□□ -0.53
CHD6-208ENST00000480022 FOXB2Q5VYV0 432 aa11.73□□□□□ -0.53
CHD6-208ENST00000480022 GPIHBP1Q8IV16 184 aa11.73□□□□□ -0.53
CHD6-208ENST00000480022 SLC17A8Q8NDX2 589 aa11.73□□□□□ -0.53
CHD6-208ENST00000480022 ASAP3Q8TDY4 903 aa11.73□□□□□ -0.53
CHD6-208ENST00000480022 EEF2KMTQ96G04 330 aa11.73□□□□□ -0.53
CHD6-208ENST00000480022 DHTKD1Q96HY7 919 aaPredicted RBP11.73□□□□□ -0.53
CHD6-208ENST00000480022 VCX3BQ9H321 246 aa11.73□□□□□ -0.53
CHD6-208ENST00000480022 VCX3AQ9NNX9 186 aa11.73□□□□□ -0.53
CHD6-208ENST00000480022 FAM114A2Q9NRY5 505 aa11.73□□□□□ -0.53
CHD6-208ENST00000480022 ADARB2Q9NS39 739 aaKnown RBP11.73□□□□□ -0.53
CHD6-208ENST00000480022 ATP8A1Q9Y2Q0 1164 aa11.73□□□□□ -0.53
CHD6-208ENST00000480022 ARL2BPQ9Y2Y0 163 aa11.73□□□□□ -0.53
CHD6-208ENST00000480022 CCDC169A6NNP5 214 aa11.73□□□□□ -0.53
CHD6-208ENST00000480022 WNT7AO00755 349 aa11.73□□□□□ -0.53
CHD6-208ENST00000480022 KCNK3O14649 394 aa11.73□□□□□ -0.53
CHD6-208ENST00000480022 EPHB6O15197 1021 aa11.73□□□□□ -0.53
CHD6-208ENST00000480022 RGS16O15492 202 aaPredicted RBP11.73□□□□□ -0.53
CHD6-208ENST00000480022 ATP6V1G1O75348 118 aa11.73□□□□□ -0.53
CHD6-208ENST00000480022 MUM1Q2TAK8 710 aa11.73□□□□□ -0.53
CHD6-208ENST00000480022 CDC42EP5Q6NZY7 148 aa11.73□□□□□ -0.53
CHD6-208ENST00000480022 FITM2Q8N6M3 262 aa11.73□□□□□ -0.53
CHD6-208ENST00000480022 PHC3Q8NDX5 983 aa11.73□□□□□ -0.53
CHD6-208ENST00000480022 SH3RF3Q8TEJ3 882 aaPredicted RBP11.73□□□□□ -0.53
CHD6-208ENST00000480022 FAM136AQ96C01 138 aa11.73□□□□□ -0.53
CHD6-208ENST00000480022 STRBPQ96SI9 672 aaKnown RBP11.73□□□□□ -0.53
CHD6-208ENST00000480022 ETNK1Q9HBU6 452 aa11.73□□□□□ -0.53
CHD6-208ENST00000480022 GALNT8Q9NY28 637 aa11.73□□□□□ -0.53
CHD6-208ENST00000480022 TMCO1Q9UM00 188 aa11.73□□□□□ -0.53
CHD6-208ENST00000480022 ADAMTSL1Q8N6G6 1762 aa11.72□□□□□ -0.53
CHD6-208ENST00000480022 TLDC2A0PJX2 215 aa11.72□□□□□ -0.53
CHD6-208ENST00000480022 BICDL2A1A5D9 508 aa11.72□□□□□ -0.53
CHD6-208ENST00000480022 RBAK-RBAKDNI3L0D1 243 aa11.72□□□□□ -0.53
CHD6-208ENST00000480022 GJB6O95452 261 aa11.72□□□□□ -0.53
CHD6-208ENST00000480022 HIRAP54198 1017 aaPredicted RBP11.72□□□□□ -0.53
CHD6-208ENST00000480022 RPS6KA1Q15418 735 aa11.72□□□□□ -0.53
CHD6-208ENST00000480022 PARP6Q2NL67 630 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms