RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-238ENST00000479894 KIF2CQ99661 725 aa17.62■□□□□ 0.41
HDLBP-238ENST00000479894 SLKQ9H2G2 1235 aaPredicted RBP17.62■□□□□ 0.41
HDLBP-238ENST00000479894 SFXN1Q9H9B4 322 aa17.62■□□□□ 0.41
HDLBP-238ENST00000479894 COL1A2P08123 1366 aa17.62■□□□□ 0.41
HDLBP-238ENST00000479894 BAHCC1Q9P281 2608 aa17.62■□□□□ 0.41
HDLBP-238ENST00000479894 ZFHX4Q86UP3 3567 aa17.61■□□□□ 0.41
HDLBP-238ENST00000479894 WDR81Q562E7 1941 aa17.61■□□□□ 0.41
HDLBP-238ENST00000479894 KRBA1A5PL33 1030 aa17.61■□□□□ 0.41
HDLBP-238ENST00000479894 GOLGA8AA7E2F4 631 aa17.61■□□□□ 0.41
HDLBP-238ENST00000479894 STK25O00506 426 aa17.61■□□□□ 0.41
HDLBP-238ENST00000479894 CPLX1O14810 134 aa17.61■□□□□ 0.41
HDLBP-238ENST00000479894 HBP1O60381 514 aa17.61■□□□□ 0.41
HDLBP-238ENST00000479894 SP9P0CG40 484 aa17.61■□□□□ 0.41
HDLBP-238ENST00000479894 POLGP54098 1239 aaPredicted RBP17.61■□□□□ 0.41
HDLBP-238ENST00000479894 AK2P54819 239 aa17.61■□□□□ 0.41
HDLBP-238ENST00000479894 NONOQ15233 471 aaKnown RBP eCLIP17.61■□□□□ 0.41
HDLBP-238ENST00000479894 PHLDB3Q6NSJ2 640 aa17.61■□□□□ 0.41
HDLBP-238ENST00000479894 CABP7Q86V35 215 aa17.61■□□□□ 0.41
HDLBP-238ENST00000479894 DCLK2Q8N568 766 aa17.61■□□□□ 0.41
HDLBP-238ENST00000479894 RIN2Q8WYP3 895 aaPredicted RBP17.61■□□□□ 0.41
HDLBP-238ENST00000479894 RSPH1Q8WYR4 309 aa17.61■□□□□ 0.41
HDLBP-238ENST00000479894 TMEM169Q96HH4 297 aa17.61■□□□□ 0.41
HDLBP-238ENST00000479894 ZBP1Q9H171 429 aa17.61■□□□□ 0.41
HDLBP-238ENST00000479894 NFASCO94856 1347 aa17.61■□□□□ 0.41
HDLBP-238ENST00000479894 CHD8Q9HCK8 2581 aa17.61■□□□□ 0.41
HDLBP-238ENST00000479894 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.6■□□□□ 0.41
HDLBP-238ENST00000479894 EPCAMP16422 314 aa17.6■□□□□ 0.41
HDLBP-238ENST00000479894 RFX1P22670 979 aa17.6■□□□□ 0.41
HDLBP-238ENST00000479894 PDIA3P30101 505 aaKnown RBP17.6■□□□□ 0.41
HDLBP-238ENST00000479894 CA8P35219 290 aa17.6■□□□□ 0.41
HDLBP-238ENST00000479894 ALDH7A1P49419 539 aaKnown RBP17.6■□□□□ 0.41
HDLBP-238ENST00000479894 ST3GAL2Q16842 350 aa17.6■□□□□ 0.41
HDLBP-238ENST00000479894 KIAA0319Q5VV43 1072 aa17.6■□□□□ 0.41
HDLBP-238ENST00000479894 KANK3Q6NY19 840 aa17.6■□□□□ 0.41
HDLBP-238ENST00000479894 TMC5Q6UXY8 1006 aa17.6■□□□□ 0.41
HDLBP-238ENST00000479894 C15orf39Q6ZRI6 1047 aa17.6■□□□□ 0.41
HDLBP-238ENST00000479894 C1orf210Q8IVY1 113 aa17.6■□□□□ 0.41
HDLBP-238ENST00000479894 SUMF1Q8NBK3 374 aa17.6■□□□□ 0.41
HDLBP-238ENST00000479894 MRPL9Q9BYD2 267 aaKnown RBP17.6■□□□□ 0.41
HDLBP-238ENST00000479894 SENP2Q9HC62 589 aa17.6■□□□□ 0.41
HDLBP-238ENST00000479894 PKD2L1Q9P0L9 805 aa17.6■□□□□ 0.41
HDLBP-238ENST00000479894 DLGAP2Q9P1A6 1054 aa17.6■□□□□ 0.41
HDLBP-238ENST00000479894 BRPF3Q9ULD4 1205 aa17.6■□□□□ 0.41
HDLBP-238ENST00000479894 USP24Q9UPU5 2620 aa17.59■□□□□ 0.41
HDLBP-238ENST00000479894 PATJQ8NI35 1801 aa17.59■□□□□ 0.41
HDLBP-238ENST00000479894 ATG7O95352 703 aa17.59■□□□□ 0.41
HDLBP-238ENST00000479894 CTSAP10619 480 aa17.59■□□□□ 0.41
HDLBP-238ENST00000479894 ACTR2P61160 394 aa17.59■□□□□ 0.41
HDLBP-238ENST00000479894 AKAP17AQ02040 695 aaKnown RBP17.59■□□□□ 0.41
HDLBP-238ENST00000479894 ECHDC2Q86YB7 292 aa17.59■□□□□ 0.41
HDLBP-238ENST00000479894 VPS52Q8N1B4 723 aa17.59■□□□□ 0.41
HDLBP-238ENST00000479894 NXPE3Q969Y0 559 aa17.59■□□□□ 0.41
HDLBP-238ENST00000479894 OSMRQ99650 979 aa17.59■□□□□ 0.41
HDLBP-238ENST00000479894 SDF4Q9BRK5 362 aa17.59■□□□□ 0.41
HDLBP-238ENST00000479894 SPZ1Q9BXG8 430 aa17.59■□□□□ 0.41
HDLBP-238ENST00000479894 TBC1D17Q9HA65 648 aa17.59■□□□□ 0.41
HDLBP-238ENST00000479894 SEC63Q9UGP8 760 aaKnown RBP17.59■□□□□ 0.41
HDLBP-238ENST00000479894 MTCL1Q9Y4B5 1905 aaKnown RBP17.59■□□□□ 0.41
HDLBP-238ENST00000479894 NID2Q14112 1375 aa17.58■□□□□ 0.4
HDLBP-238ENST00000479894 IGKV6D-21A0A0A0MT36 114 aa17.58■□□□□ 0.4
HDLBP-238ENST00000479894 NARSO43776 548 aaKnown RBP17.58■□□□□ 0.4
HDLBP-238ENST00000479894 PFKFB2O60825 505 aa17.58■□□□□ 0.4
HDLBP-238ENST00000479894 KINO60870 393 aaKnown RBP17.58■□□□□ 0.4
HDLBP-238ENST00000479894 CFHP08603 1231 aa17.58■□□□□ 0.4
HDLBP-238ENST00000479894 ZSCAN20P17040 1043 aaPredicted RBP17.58■□□□□ 0.4
HDLBP-238ENST00000479894 BCAR1P56945 870 aa17.58■□□□□ 0.4
HDLBP-238ENST00000479894 LETM2Q2VYF4 491 aa17.58■□□□□ 0.4
HDLBP-238ENST00000479894 ZNF484Q5JVG2 852 aa17.58■□□□□ 0.4
HDLBP-238ENST00000479894 TRIM22Q8IYM9 498 aa17.58■□□□□ 0.4
HDLBP-238ENST00000479894 RRP36Q96EU6 259 aaKnown RBP17.58■□□□□ 0.4
HDLBP-238ENST00000479894 PRR5-ARHGAP8B1AHC4 643 aa17.57■□□□□ 0.4
HDLBP-238ENST00000479894 GPR32O75388 356 aa17.57■□□□□ 0.4
HDLBP-238ENST00000479894 SRFP11831 508 aa17.57■□□□□ 0.4
HDLBP-238ENST00000479894 ATXN1P54253 815 aaKnown RBP17.57■□□□□ 0.4
HDLBP-238ENST00000479894 ARHGAP8P85298 464 aa17.57■□□□□ 0.4
HDLBP-238ENST00000479894 COL9A3Q14050 684 aaPredicted RBP17.57■□□□□ 0.4
HDLBP-238ENST00000479894 KIZQ2M2Z5 673 aa17.57■□□□□ 0.4
HDLBP-238ENST00000479894 CLLU1OSQ5K130 101 aa17.57■□□□□ 0.4
HDLBP-238ENST00000479894 TMTC3Q6ZXV5 915 aa17.57■□□□□ 0.4
HDLBP-238ENST00000479894 DDX53Q86TM3 631 aaKnown RBP17.57■□□□□ 0.4
HDLBP-238ENST00000479894 ZNF710Q8N1W2 664 aa17.57■□□□□ 0.4
HDLBP-238ENST00000479894 MYL10Q9BUA6 226 aa17.57■□□□□ 0.4
HDLBP-238ENST00000479894 PSTPIP2Q9H939 334 aa17.57■□□□□ 0.4
HDLBP-238ENST00000479894 KCNH7Q9NS40 1196 aa17.57■□□□□ 0.4
HDLBP-238ENST00000479894 SIT1Q9Y3P8 196 aa17.57■□□□□ 0.4
HDLBP-238ENST00000479894 SPDYE3A6NKU9 549 aa17.56■□□□□ 0.4
HDLBP-238ENST00000479894 SPTLC1O15269 473 aa17.56■□□□□ 0.4
HDLBP-238ENST00000479894 ZNF528Q3MIS6 628 aa17.56■□□□□ 0.4
HDLBP-238ENST00000479894 VARS2Q5ST30 1063 aaKnown RBP17.56■□□□□ 0.4
HDLBP-238ENST00000479894 CYP26C1Q6V0L0 522 aa17.56■□□□□ 0.4
HDLBP-238ENST00000479894 RHOBTB2Q9BYZ6 727 aa17.56■□□□□ 0.4
HDLBP-238ENST00000479894 STK39Q9UEW8 545 aa17.56■□□□□ 0.4
HDLBP-238ENST00000479894 TPCN1Q9ULQ1 816 aa17.56■□□□□ 0.4
HDLBP-238ENST00000479894 A0A0U1RQF3 1178 aa17.55■□□□□ 0.4
HDLBP-238ENST00000479894 NT5C1B-RDH14C9J2C7 533 aa17.55■□□□□ 0.4
HDLBP-238ENST00000479894 hCG_1984214I3L0E3 225 aa17.55■□□□□ 0.4
HDLBP-238ENST00000479894 LMNB2Q03252 620 aa17.55■□□□□ 0.4
HDLBP-238ENST00000479894 FAM160B1Q5W0V3 765 aa17.55■□□□□ 0.4
HDLBP-238ENST00000479894 ZNF598Q86UK7 904 aaKnown RBP17.55■□□□□ 0.4
HDLBP-238ENST00000479894 TEX2Q8IWB9 1127 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms