RNA–Protein interactions for RNA: ENST00000479359.1

STAG3-213, Transcript of stromal antigen 3, human

TSL 5

Gene STAG3, Length 780 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STAG3-213	ENST00000479359	GRIN1	Q05586	938 aa		11.9	□□□□□ -0.5
STAG3-213	ENST00000479359	CDCA2	Q69YH5	1023 aa	Predicted RBP	11.9	□□□□□ -0.5
STAG3-213	ENST00000479359	CCDC73	Q6ZRK6	1079 aa		11.9	□□□□□ -0.5
STAG3-213	ENST00000479359	SLC24A5	Q71RS6	500 aa		11.9	□□□□□ -0.5
STAG3-213	ENST00000479359	KCNK18	Q7Z418	384 aa		11.9	□□□□□ -0.5
STAG3-213	ENST00000479359	RTN4RL1	Q86UN2	441 aa	Predicted RBP	11.9	□□□□□ -0.5
STAG3-213	ENST00000479359	RNF149	Q8NC42	400 aa		11.9	□□□□□ -0.5
STAG3-213	ENST00000479359	SYMPK	Q92797	1274 aa	Known RBP	11.9	□□□□□ -0.5
STAG3-213	ENST00000479359	CCDC51	Q96ER9	411 aa		11.9	□□□□□ -0.5
STAG3-213	ENST00000479359	DRC1	Q96MC2	740 aa		11.9	□□□□□ -0.5
STAG3-213	ENST00000479359	SCLT1	Q96NL6	688 aa		11.9	□□□□□ -0.5
STAG3-213	ENST00000479359	RAD9A	Q99638	391 aa		11.9	□□□□□ -0.5
STAG3-213	ENST00000479359	FDXACB1	Q9BRP7	624 aa	Predicted RBP	11.9	□□□□□ -0.5
STAG3-213	ENST00000479359	NTPCR	Q9BSD7	190 aa	Known RBP	11.9	□□□□□ -0.5
STAG3-213	ENST00000479359	PBX4	Q9BYU1	374 aa		11.9	□□□□□ -0.5
STAG3-213	ENST00000479359	SCAND2P	Q9GZW5	306 aa	Predicted RBP	11.9	□□□□□ -0.5
STAG3-213	ENST00000479359	ELAC1	Q9H777	363 aa	Known RBP	11.9	□□□□□ -0.5
STAG3-213	ENST00000479359	RGS18	Q9NS28	235 aa		11.9	□□□□□ -0.5
STAG3-213	ENST00000479359	DACT1	Q9NYF0	836 aa		11.9	□□□□□ -0.5
STAG3-213	ENST00000479359	TFIP11	Q9UBB9	837 aa	Known RBP	11.9	□□□□□ -0.5
STAG3-213	ENST00000479359	INSL6	Q9Y581	213 aa		11.9	□□□□□ -0.5
STAG3-213	ENST00000479359		E9PMD0	336 aa		11.89	□□□□□ -0.51
STAG3-213	ENST00000479359	STAG3L1	P0CL83	205 aa		11.89	□□□□□ -0.51
STAG3-213	ENST00000479359	SRGAP2C	P0DJJ0	459 aa		11.89	□□□□□ -0.51
STAG3-213	ENST00000479359	DNAJB2	P25686	324 aa		11.89	□□□□□ -0.51
STAG3-213	ENST00000479359	NAMPT	P43490	491 aa		11.89	□□□□□ -0.51
STAG3-213	ENST00000479359	SARS	P49591	514 aa	Known RBP	11.89	□□□□□ -0.51
STAG3-213	ENST00000479359	EFNA5	P52803	228 aa		11.89	□□□□□ -0.51
STAG3-213	ENST00000479359	DEFB103A	P81534	67 aa		11.89	□□□□□ -0.51
STAG3-213	ENST00000479359	DNM1	Q05193	864 aa	Known RBP	11.89	□□□□□ -0.51
STAG3-213	ENST00000479359	NFX1	Q12986	1120 aa	Known RBP	11.89	□□□□□ -0.51
STAG3-213	ENST00000479359	FAM187B	Q17R55	369 aa		11.89	□□□□□ -0.51
STAG3-213	ENST00000479359	AXDND1	Q5T1B0	1012 aa	Predicted RBP	11.89	□□□□□ -0.51
STAG3-213	ENST00000479359	FAM102B	Q5T8I3	360 aa		11.89	□□□□□ -0.51
STAG3-213	ENST00000479359	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	11.89	□□□□□ -0.51
STAG3-213	ENST00000479359	NPAS4	Q8IUM7	802 aa		11.89	□□□□□ -0.51
STAG3-213	ENST00000479359	SP7	Q8TDD2	431 aa	Predicted RBP	11.89	□□□□□ -0.51
STAG3-213	ENST00000479359	ASAP3	Q8TDY4	903 aa		11.89	□□□□□ -0.51
STAG3-213	ENST00000479359	LINC01599	Q8WXQ3	324 aa		11.89	□□□□□ -0.51
STAG3-213	ENST00000479359	EPSTI1	Q96J88	318 aa		11.89	□□□□□ -0.51
STAG3-213	ENST00000479359	PRIMPOL	Q96LW4	560 aa		11.89	□□□□□ -0.51
STAG3-213	ENST00000479359	NLRP4	Q96MN2	994 aa		11.89	□□□□□ -0.51
STAG3-213	ENST00000479359	CLIC6	Q96NY7	704 aa		11.89	□□□□□ -0.51
STAG3-213	ENST00000479359	POLR3F	Q9H1D9	316 aa	Predicted RBP	11.89	□□□□□ -0.51
STAG3-213	ENST00000479359	C2orf40	Q9H1Z8	148 aa		11.89	□□□□□ -0.51
STAG3-213	ENST00000479359	CUEDC2	Q9H467	287 aa		11.89	□□□□□ -0.51
STAG3-213	ENST00000479359	BLOC1S4	Q9NUP1	217 aa		11.89	□□□□□ -0.51
STAG3-213	ENST00000479359	ODF2L	Q9ULJ1	636 aa		11.89	□□□□□ -0.51
STAG3-213	ENST00000479359	RBM19	Q9Y4C8	960 aa	Known RBP	11.89	□□□□□ -0.51
STAG3-213	ENST00000479359	LOXHD1	Q8IVV2	1947 aa		11.89	□□□□□ -0.51
STAG3-213	ENST00000479359	TTC3	P53804	2025 aa		11.89	□□□□□ -0.51
STAG3-213	ENST00000479359	SI	P14410	1827 aa		11.88	□□□□□ -0.51
STAG3-213	ENST00000479359	COL4A6	Q14031	1691 aa		11.88	□□□□□ -0.51
STAG3-213	ENST00000479359	CHD9	Q3L8U1	2897 aa		11.88	□□□□□ -0.51
STAG3-213	ENST00000479359		A0A087WWV3	80 aa		11.88	□□□□□ -0.51
STAG3-213	ENST00000479359		A0A0U1RQF3	1178 aa		11.88	□□□□□ -0.51
STAG3-213	ENST00000479359	DENND3	A2RUS2	1198 aa		11.88	□□□□□ -0.51
STAG3-213	ENST00000479359		C9IYK1	514 aa		11.88	□□□□□ -0.51
STAG3-213	ENST00000479359	ZNF623	O75123	536 aa		11.88	□□□□□ -0.51
STAG3-213	ENST00000479359	EOMES	O95936	686 aa		11.88	□□□□□ -0.51
STAG3-213	ENST00000479359	SKI	P12755	728 aa		11.88	□□□□□ -0.51
STAG3-213	ENST00000479359	ZSCAN20	P17040	1043 aa	Predicted RBP	11.88	□□□□□ -0.51
STAG3-213	ENST00000479359	PLCG1	P19174	1290 aa		11.88	□□□□□ -0.51
STAG3-213	ENST00000479359	NCBP1	Q09161	790 aa	Known RBP	11.88	□□□□□ -0.51
STAG3-213	ENST00000479359	CAPS	Q13938	189 aa		11.88	□□□□□ -0.51
STAG3-213	ENST00000479359	KARS	Q15046	597 aa	Known RBP	11.88	□□□□□ -0.51
STAG3-213	ENST00000479359	RRAGB	Q5VZM2	374 aa		11.88	□□□□□ -0.51
STAG3-213	ENST00000479359	PPP4R3CP	Q6ZMV5	832 aa		11.88	□□□□□ -0.51
STAG3-213	ENST00000479359	KSR1	Q8IVT5	923 aa		11.88	□□□□□ -0.51
STAG3-213	ENST00000479359	SPIRE2	Q8WWL2	714 aa		11.88	□□□□□ -0.51
STAG3-213	ENST00000479359	RAD54L	Q92698	747 aa		11.88	□□□□□ -0.51
STAG3-213	ENST00000479359	TIFA	Q96CG3	184 aa		11.88	□□□□□ -0.51
STAG3-213	ENST00000479359	IFT74	Q96LB3	600 aa		11.88	□□□□□ -0.51
STAG3-213	ENST00000479359	ADAM2	Q99965	735 aa		11.88	□□□□□ -0.51
STAG3-213	ENST00000479359	PYM1	Q9BRP8	204 aa	Known RBP	11.88	□□□□□ -0.51
STAG3-213	ENST00000479359	FZD8	Q9H461	694 aa		11.88	□□□□□ -0.51
STAG3-213	ENST00000479359	AGPAT5	Q9NUQ2	364 aa		11.88	□□□□□ -0.51
STAG3-213	ENST00000479359	TMEM161A	Q9NX61	479 aa		11.88	□□□□□ -0.51
STAG3-213	ENST00000479359	ARID2	Q68CP9	1835 aa		11.88	□□□□□ -0.51
STAG3-213	ENST00000479359	MICAL3	Q7RTP6	2002 aa		11.87	□□□□□ -0.51
STAG3-213	ENST00000479359	GRXCR1	A8MXD5	290 aa		11.87	□□□□□ -0.51
STAG3-213	ENST00000479359		H0YCG3	227 aa		11.87	□□□□□ -0.51
STAG3-213	ENST00000479359	HOXA2	O43364	376 aa		11.87	□□□□□ -0.51
STAG3-213	ENST00000479359	TLL1	O43897	1013 aa		11.87	□□□□□ -0.51
STAG3-213	ENST00000479359	ABCD1	P33897	745 aa		11.87	□□□□□ -0.51
STAG3-213	ENST00000479359	ME1	P48163	572 aa		11.87	□□□□□ -0.51
STAG3-213	ENST00000479359	RAB27A	P51159	221 aa		11.87	□□□□□ -0.51
STAG3-213	ENST00000479359	ZNF131	P52739	623 aa		11.87	□□□□□ -0.51
STAG3-213	ENST00000479359	MBTD1	Q05BQ5	628 aa		11.87	□□□□□ -0.51
STAG3-213	ENST00000479359	MAPK7	Q13164	816 aa		11.87	□□□□□ -0.51
STAG3-213	ENST00000479359	ZRSR1	Q15695	479 aa	Known RBP	11.87	□□□□□ -0.51
STAG3-213	ENST00000479359	FOXD4L5	Q5VV16	416 aa	Predicted RBP	11.87	□□□□□ -0.51
STAG3-213	ENST00000479359	ADAL	Q6DHV7	355 aa		11.87	□□□□□ -0.51
STAG3-213	ENST00000479359	USP49	Q70CQ1	688 aa		11.87	□□□□□ -0.51
STAG3-213	ENST00000479359	CATSPER4	Q7RTX7	472 aa		11.87	□□□□□ -0.51
STAG3-213	ENST00000479359	ZBTB8OS	Q8IWT0	167 aa		11.87	□□□□□ -0.51
STAG3-213	ENST00000479359	MYOCD	Q8IZQ8	938 aa		11.87	□□□□□ -0.51
STAG3-213	ENST00000479359	DAW1	Q8N136	415 aa		11.87	□□□□□ -0.51
STAG3-213	ENST00000479359	RASSF8	Q8NHQ8	419 aa		11.87	□□□□□ -0.51
STAG3-213	ENST00000479359	LEO1	Q8WVC0	666 aa	Predicted RBP	11.87	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms