RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 FAM160A1Q05DH4 1040 aa7.49□□□□□ -1.21
USP48-208ENST00000479177 GRM1Q13255 1194 aa7.49□□□□□ -1.21
USP48-208ENST00000479177 CRHR2Q13324 411 aa7.49□□□□□ -1.21
USP48-208ENST00000479177 KCTD2Q14681 263 aa7.49□□□□□ -1.21
USP48-208ENST00000479177 DEFB115Q30KQ5 88 aa7.49□□□□□ -1.21
USP48-208ENST00000479177 SPECC1Q5M775 1068 aa7.49□□□□□ -1.21
USP48-208ENST00000479177 WDR78Q5VTH9 848 aa7.49□□□□□ -1.21
USP48-208ENST00000479177 C17orf99Q6UX52 265 aa7.49□□□□□ -1.21
USP48-208ENST00000479177 DTHD1Q6ZMT9 781 aa7.49□□□□□ -1.21
USP48-208ENST00000479177 PLA2G4DQ86XP0 818 aa7.49□□□□□ -1.21
USP48-208ENST00000479177 FMR1NBQ8N0W7 255 aaPredicted RBP7.49□□□□□ -1.21
USP48-208ENST00000479177 ABRAQ8N0Z2 381 aa7.49□□□□□ -1.21
USP48-208ENST00000479177 DNERQ8NFT8 737 aa7.49□□□□□ -1.21
USP48-208ENST00000479177 CYP2W1Q8TAV3 490 aa7.49□□□□□ -1.21
USP48-208ENST00000479177 MXRA8Q9BRK3 442 aa7.49□□□□□ -1.21
USP48-208ENST00000479177 ZFP64Q9NPA5 681 aa7.49□□□□□ -1.21
USP48-208ENST00000479177 DDX19AQ9NUU7 478 aaKnown RBP7.49□□□□□ -1.21
USP48-208ENST00000479177 DNAJB12Q9NXW2 375 aaKnown RBP7.49□□□□□ -1.21
USP48-208ENST00000479177 CPA4Q9UI42 421 aa7.49□□□□□ -1.21
USP48-208ENST00000479177 NAGPAQ9UK23 515 aa7.49□□□□□ -1.21
USP48-208ENST00000479177 UBIAD1Q9Y5Z9 338 aa7.49□□□□□ -1.21
USP48-208ENST00000479177 ZSWIM8A7E2V4 1837 aa7.48□□□□□ -1.21
USP48-208ENST00000479177 A0A1B0GVL5 298 aa7.48□□□□□ -1.21
USP48-208ENST00000479177 PP2D1A8MPX8 630 aa7.48□□□□□ -1.21
USP48-208ENST00000479177 ZBTB42B2RXF5 422 aa7.48□□□□□ -1.21
USP48-208ENST00000479177 CA12O43570 354 aa7.48□□□□□ -1.21
USP48-208ENST00000479177 DYRK3O43781 588 aa7.48□□□□□ -1.21
USP48-208ENST00000479177 PGK2P07205 417 aa7.48□□□□□ -1.21
USP48-208ENST00000479177 SPATA31C1P0DKV0 1188 aa7.48□□□□□ -1.21
USP48-208ENST00000479177 FCER1AP12319 257 aa7.48□□□□□ -1.21
USP48-208ENST00000479177 ADORA2AP29274 412 aa7.48□□□□□ -1.21
USP48-208ENST00000479177 MAPK4P31152 587 aa7.48□□□□□ -1.21
USP48-208ENST00000479177 ZNF76P36508 570 aa7.48□□□□□ -1.21
USP48-208ENST00000479177 TXKP42681 527 aa7.48□□□□□ -1.21
USP48-208ENST00000479177 MLLT1Q03111 559 aaPredicted RBP7.48□□□□□ -1.21
USP48-208ENST00000479177 SPIRE1Q08AE8 756 aa7.48□□□□□ -1.21
USP48-208ENST00000479177 SNW1Q13573 536 aaKnown RBP7.48□□□□□ -1.21
USP48-208ENST00000479177 GRB14Q14449 540 aa7.48□□□□□ -1.21
USP48-208ENST00000479177 TMEM266Q2M3C6 531 aa7.48□□□□□ -1.21
USP48-208ENST00000479177 CAVIN1Q6NZI2 390 aaKnown RBP7.48□□□□□ -1.21
USP48-208ENST00000479177 USP49Q70CQ1 688 aa7.48□□□□□ -1.21
USP48-208ENST00000479177 GPR142Q7Z601 462 aa7.48□□□□□ -1.21
USP48-208ENST00000479177 PLEKHH3Q7Z736 793 aa7.48□□□□□ -1.21
USP48-208ENST00000479177 VSIG10LQ86VR7 867 aa7.48□□□□□ -1.21
USP48-208ENST00000479177 SLFN12Q8IYM2 578 aa7.48□□□□□ -1.21
USP48-208ENST00000479177 IGSF22Q8N9C0 903 aa7.48□□□□□ -1.21
USP48-208ENST00000479177 SLC5A5Q92911 643 aa7.48□□□□□ -1.21
USP48-208ENST00000479177 GJA10Q969M2 543 aa7.48□□□□□ -1.21
USP48-208ENST00000479177 AK8Q96MA6 479 aa7.48□□□□□ -1.21
USP48-208ENST00000479177 FAM20AQ96MK3 541 aa7.48□□□□□ -1.21
USP48-208ENST00000479177 INPP4AQ96PE3 977 aaPredicted RBP7.48□□□□□ -1.21
USP48-208ENST00000479177 IWS1Q96ST2 819 aa7.48□□□□□ -1.21
USP48-208ENST00000479177 CLSTN2Q9H4D0 955 aa7.48□□□□□ -1.21
USP48-208ENST00000479177 ZFYVE28Q9HCC9 887 aa7.48□□□□□ -1.21
USP48-208ENST00000479177 JADE2Q9NQC1 790 aa7.48□□□□□ -1.21
USP48-208ENST00000479177 DACT1Q9NYF0 836 aa7.48□□□□□ -1.21
USP48-208ENST00000479177 TMEM63CQ9P1W3 806 aa7.48□□□□□ -1.21
USP48-208ENST00000479177 VAV3Q9UKW4 847 aa7.48□□□□□ -1.21
USP48-208ENST00000479177 KCNH3Q9ULD8 1083 aa7.48□□□□□ -1.21
USP48-208ENST00000479177 SLC6A14Q9UN76 642 aa7.48□□□□□ -1.21
USP48-208ENST00000479177 A0A087X0B3 334 aa7.47□□□□□ -1.21
USP48-208ENST00000479177 LOC102724159A0A0B4J2E5 919 aa7.47□□□□□ -1.21
USP48-208ENST00000479177 SLC15A5A6NIM6 579 aa7.47□□□□□ -1.21
USP48-208ENST00000479177 STRNO43815 780 aa7.47□□□□□ -1.21
USP48-208ENST00000479177 COBLO75128 1261 aa7.47□□□□□ -1.21
USP48-208ENST00000479177 PSMD10O75832 226 aa7.47□□□□□ -1.21
USP48-208ENST00000479177 STAM2O75886 525 aa7.47□□□□□ -1.21
USP48-208ENST00000479177 ARP10275 920 aa7.47□□□□□ -1.21
USP48-208ENST00000479177 MYCLP12524 364 aaPredicted RBP7.47□□□□□ -1.21
USP48-208ENST00000479177 TECP42680 631 aa7.47□□□□□ -1.21
USP48-208ENST00000479177 SYKP43405 635 aa7.47□□□□□ -1.21
USP48-208ENST00000479177 EIF1AXP47813 144 aaKnown RBP7.47□□□□□ -1.21
USP48-208ENST00000479177 MTMR1Q13613 665 aa7.47□□□□□ -1.21
USP48-208ENST00000479177 PWP2Q15269 919 aaKnown RBP7.47□□□□□ -1.21
USP48-208ENST00000479177 ZNF792Q3KQV3 632 aa7.47□□□□□ -1.21
USP48-208ENST00000479177 CCDC183Q5T5S1 534 aa7.47□□□□□ -1.21
USP48-208ENST00000479177 MORC4Q8TE76 937 aa7.47□□□□□ -1.21
USP48-208ENST00000479177 SYAP1Q96A49 352 aaPredicted RBP7.47□□□□□ -1.21
USP48-208ENST00000479177 GPRASP2Q96D09 838 aa7.47□□□□□ -1.21
USP48-208ENST00000479177 EPSTI1Q96J88 318 aa7.47□□□□□ -1.21
USP48-208ENST00000479177 UIMC1Q96RL1 719 aa7.47□□□□□ -1.21
USP48-208ENST00000479177 ZNF577Q9BSK1 485 aa7.47□□□□□ -1.21
USP48-208ENST00000479177 MMTAG2Q9BU76 263 aaKnown RBP7.47□□□□□ -1.21
USP48-208ENST00000479177 WDR11Q9BZH6 1224 aa7.47□□□□□ -1.21
USP48-208ENST00000479177 CCSER1Q9C0I3 900 aa7.47□□□□□ -1.21
USP48-208ENST00000479177 NUP62CLQ9H1M0 184 aa7.47□□□□□ -1.21
USP48-208ENST00000479177 TTC12Q9H892 705 aaPredicted RBP7.47□□□□□ -1.21
USP48-208ENST00000479177 AGO4Q9HCK5 861 aaKnown RBP7.47□□□□□ -1.21
USP48-208ENST00000479177 KCNH7Q9NS40 1196 aa7.47□□□□□ -1.21
USP48-208ENST00000479177 FAM13BQ9NYF5 915 aa7.47□□□□□ -1.21
USP48-208ENST00000479177 ADD3Q9UEY8 706 aaKnown RBP7.47□□□□□ -1.21
USP48-208ENST00000479177 IVNS1ABPQ9Y6Y0 642 aa7.47□□□□□ -1.21
USP48-208ENST00000479177 DOCK5Q9H7D0 1870 aa7.47□□□□□ -1.21
USP48-208ENST00000479177 CASP8AP2Q9UKL3 1982 aa7.46□□□□□ -1.21
USP48-208ENST00000479177 A6NHS1 94 aa7.46□□□□□ -1.22
USP48-208ENST00000479177 M0R082 166 aa7.46□□□□□ -1.22
USP48-208ENST00000479177 IPO5O00410 1097 aaKnown RBP7.46□□□□□ -1.22
USP48-208ENST00000479177 MARCH6O60337 910 aa7.46□□□□□ -1.22
USP48-208ENST00000479177 GAS7O60861 476 aa7.46□□□□□ -1.22
USP48-208ENST00000479177 KINO60870 393 aaKnown RBP7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms