RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 SARSP49591 514 aaKnown RBP17.18■□□□□ 0.34
C9orf3-217ENST00000479161 TMEM119Q4V9L6 283 aa17.18■□□□□ 0.34
C9orf3-217ENST00000479161 LINC00301Q8NCQ3 95 aa17.18■□□□□ 0.34
C9orf3-217ENST00000479161 KIFAP3Q92845 792 aa17.18■□□□□ 0.34
C9orf3-217ENST00000479161 CALML4Q96GE6 196 aa17.18■□□□□ 0.34
C9orf3-217ENST00000479161 SCLT1Q96NL6 688 aa17.18■□□□□ 0.34
C9orf3-217ENST00000479161 BHMT2Q9H2M3 363 aa17.18■□□□□ 0.34
C9orf3-217ENST00000479161 C17orf75Q9HAS0 396 aa17.18■□□□□ 0.34
C9orf3-217ENST00000479161 RC3H2Q9HBD1 1191 aaKnown RBP17.18■□□□□ 0.34
C9orf3-217ENST00000479161 FBXO2Q9UK22 296 aaPredicted RBP17.18■□□□□ 0.34
C9orf3-217ENST00000479161 A0A0C4DFX4 3053 aa17.18■□□□□ 0.34
C9orf3-217ENST00000479161 PP2D1A8MPX8 630 aa17.17■□□□□ 0.34
C9orf3-217ENST00000479161 BRD1O95696 1058 aa17.17■□□□□ 0.34
C9orf3-217ENST00000479161 CDC25AP30304 524 aa17.17■□□□□ 0.34
C9orf3-217ENST00000479161 AXLP30530 894 aa17.17■□□□□ 0.34
C9orf3-217ENST00000479161 RABGGTBP53611 331 aa17.17■□□□□ 0.34
C9orf3-217ENST00000479161 GRB10Q13322 594 aa17.17■□□□□ 0.34
C9orf3-217ENST00000479161 PPP2R5AQ15172 486 aa17.17■□□□□ 0.34
C9orf3-217ENST00000479161 FAM173BQ6P4H8 233 aa17.17■□□□□ 0.34
C9orf3-217ENST00000479161 CABP7Q86V35 215 aa17.17■□□□□ 0.34
C9orf3-217ENST00000479161 SYT2Q8N9I0 419 aaPredicted RBP17.17■□□□□ 0.34
C9orf3-217ENST00000479161 RNF149Q8NC42 400 aa17.17■□□□□ 0.34
C9orf3-217ENST00000479161 ZNF689Q96CS4 500 aaPredicted RBP17.17■□□□□ 0.34
C9orf3-217ENST00000479161 NLRP4Q96MN2 994 aa17.17■□□□□ 0.34
C9orf3-217ENST00000479161 SAMD11Q96NU1 681 aa17.17■□□□□ 0.34
C9orf3-217ENST00000479161 PNMA5Q96PV4 448 aa17.17■□□□□ 0.34
C9orf3-217ENST00000479161 ADAM2Q99965 735 aa17.17■□□□□ 0.34
C9orf3-217ENST00000479161 CFAP45Q9UL16 551 aa17.17■□□□□ 0.34
C9orf3-217ENST00000479161 TRANK1O15050 2925 aa17.17■□□□□ 0.34
C9orf3-217ENST00000479161 A0A0U1RQF3 1178 aa17.16■□□□□ 0.34
C9orf3-217ENST00000479161 DENND3A2RUS2 1198 aa17.16■□□□□ 0.34
C9orf3-217ENST00000479161 MGEA5O60502 916 aa17.16■□□□□ 0.34
C9orf3-217ENST00000479161 USO1O60763 962 aaKnown RBP17.16■□□□□ 0.34
C9orf3-217ENST00000479161 ZNF623O75123 536 aa17.16■□□□□ 0.34
C9orf3-217ENST00000479161 DGKIO75912 1065 aa17.16■□□□□ 0.34
C9orf3-217ENST00000479161 EOMESO95936 686 aa17.16■□□□□ 0.34
C9orf3-217ENST00000479161 SKIP12755 728 aa17.16■□□□□ 0.34
C9orf3-217ENST00000479161 GLRA2P23416 452 aa17.16■□□□□ 0.34
C9orf3-217ENST00000479161 GUCY2CP25092 1073 aa17.16■□□□□ 0.34
C9orf3-217ENST00000479161 TAP1Q03518 808 aa17.16■□□□□ 0.34
C9orf3-217ENST00000479161 C1orf186Q6ZWK4 172 aa17.16■□□□□ 0.34
C9orf3-217ENST00000479161 KSR1Q8IVT5 923 aa17.16■□□□□ 0.34
C9orf3-217ENST00000479161 KRI1Q8N9T8 703 aaKnown RBP17.16■□□□□ 0.34
C9orf3-217ENST00000479161 KCNN1Q92952 543 aa17.16■□□□□ 0.34
C9orf3-217ENST00000479161 CDK5RAP3Q96JB5 506 aa17.16■□□□□ 0.34
C9orf3-217ENST00000479161 NKX2-4Q9H2Z4 354 aa17.16■□□□□ 0.34
C9orf3-217ENST00000479161 TMEM161AQ9NX61 479 aa17.16■□□□□ 0.34
C9orf3-217ENST00000479161 MYH11P35749 1972 aa17.16■□□□□ 0.34
C9orf3-217ENST00000479161 RALGAPA2Q2PPJ7 1873 aa17.16■□□□□ 0.34
C9orf3-217ENST00000479161 E9PMD0 336 aa17.15■□□□□ 0.34
C9orf3-217ENST00000479161 CA3P07451 260 aa17.15■□□□□ 0.34
C9orf3-217ENST00000479161 SRGAP2CP0DJJ0 459 aa17.15■□□□□ 0.34
C9orf3-217ENST00000479161 NAMPTP43490 491 aa17.15■□□□□ 0.34
C9orf3-217ENST00000479161 CAPSQ13938 189 aa17.15■□□□□ 0.34
C9orf3-217ENST00000479161 FAM187BQ17R55 369 aa17.15■□□□□ 0.34
C9orf3-217ENST00000479161 PPP2R2DQ66LE6 453 aa17.15■□□□□ 0.34
C9orf3-217ENST00000479161 CDCA2Q69YH5 1023 aaPredicted RBP17.15■□□□□ 0.34
C9orf3-217ENST00000479161 RINT1Q6NUQ1 792 aa17.15■□□□□ 0.34
C9orf3-217ENST00000479161 CCDC51Q96ER9 411 aa17.15■□□□□ 0.34
C9orf3-217ENST00000479161 PRIMPOLQ96LW4 560 aa17.15■□□□□ 0.34
C9orf3-217ENST00000479161 PPP1R16BQ96T49 567 aa17.15■□□□□ 0.34
C9orf3-217ENST00000479161 NTPCRQ9BSD7 190 aaKnown RBP17.15■□□□□ 0.34
C9orf3-217ENST00000479161 POLR3FQ9H1D9 316 aaPredicted RBP17.15■□□□□ 0.34
C9orf3-217ENST00000479161 C2orf40Q9H1Z8 148 aa17.15■□□□□ 0.34
C9orf3-217ENST00000479161 AGPAT5Q9NUQ2 364 aa17.15■□□□□ 0.34
C9orf3-217ENST00000479161 ATP6V1DQ9Y5K8 247 aa17.15■□□□□ 0.34
C9orf3-217ENST00000479161 FNDC1Q4ZHG4 1894 aaPredicted RBP17.15■□□□□ 0.34
C9orf3-217ENST00000479161 PHLPP2Q6ZVD8 1323 aa17.15■□□□□ 0.34
C9orf3-217ENST00000479161 A0A087WWV3 80 aa17.14■□□□□ 0.33
C9orf3-217ENST00000479161 SPTLC2O15270 562 aa17.14■□□□□ 0.33
C9orf3-217ENST00000479161 HOXA2O43364 376 aa17.14■□□□□ 0.33
C9orf3-217ENST00000479161 POU3F3P20264 500 aaPredicted RBP17.14■□□□□ 0.33
C9orf3-217ENST00000479161 SCP2P22307 547 aa17.14■□□□□ 0.33
C9orf3-217ENST00000479161 RAB27AP51159 221 aa17.14■□□□□ 0.33
C9orf3-217ENST00000479161 SLC12A3P55017 1021 aa17.14■□□□□ 0.33
C9orf3-217ENST00000479161 ERVK-21P61565 698 aa17.14■□□□□ 0.33
C9orf3-217ENST00000479161 GRIN1Q05586 938 aa17.14■□□□□ 0.33
C9orf3-217ENST00000479161 NCBP1Q09161 790 aaKnown RBP17.14■□□□□ 0.33
C9orf3-217ENST00000479161 PPP4R3CPQ6ZMV5 832 aa17.14■□□□□ 0.33
C9orf3-217ENST00000479161 CATSPER4Q7RTX7 472 aa17.14■□□□□ 0.33
C9orf3-217ENST00000479161 KCNK18Q7Z418 384 aa17.14■□□□□ 0.33
C9orf3-217ENST00000479161 CMTR2Q8IYT2 770 aaKnown RBP17.14■□□□□ 0.33
C9orf3-217ENST00000479161 KCNG4Q8TDN1 519 aa17.14■□□□□ 0.33
C9orf3-217ENST00000479161 ASAP3Q8TDY4 903 aa17.14■□□□□ 0.33
C9orf3-217ENST00000479161 CLP1Q92989 425 aaKnown RBP17.14■□□□□ 0.33
C9orf3-217ENST00000479161 DRC1Q96MC2 740 aa17.14■□□□□ 0.33
C9orf3-217ENST00000479161 YME1L1Q96TA2 773 aa17.14■□□□□ 0.33
C9orf3-217ENST00000479161 CSRNP2Q9H175 543 aa17.14■□□□□ 0.33
C9orf3-217ENST00000479161 STK17AQ9UEE5 414 aa17.14■□□□□ 0.33
C9orf3-217ENST00000479161 CCDC39Q9UFE4 941 aa17.14■□□□□ 0.33
C9orf3-217ENST00000479161 RWDD3Q9Y3V2 267 aa17.14■□□□□ 0.33
C9orf3-217ENST00000479161 PCDHB7Q9Y5E2 793 aa17.14■□□□□ 0.33
C9orf3-217ENST00000479161 LINC01553A4QN01 128 aa17.13■□□□□ 0.33
C9orf3-217ENST00000479161 MYOGP15173 224 aa17.13■□□□□ 0.33
C9orf3-217ENST00000479161 MARCKSP29966 332 aaPredicted RBP17.13■□□□□ 0.33
C9orf3-217ENST00000479161 HOXA11P31270 313 aaPredicted RBP17.13■□□□□ 0.33
C9orf3-217ENST00000479161 TXLNAP40222 546 aa17.13■□□□□ 0.33
C9orf3-217ENST00000479161 EFNA5P52803 228 aa17.13■□□□□ 0.33
C9orf3-217ENST00000479161 PKP1Q13835 747 aa17.13■□□□□ 0.33
C9orf3-217ENST00000479161 STK38Q15208 465 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms