RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 A0A087WZ62 844 aa14.89□□□□□ -0.03
VCL-205ENST00000478896 TMEM150BA6NC51 233 aa14.89□□□□□ -0.03
VCL-205ENST00000478896 EDIL3O43854 480 aa14.89□□□□□ -0.03
VCL-205ENST00000478896 ZC3H11AO75152 810 aaKnown RBP eCLIP14.89□□□□□ -0.03
VCL-205ENST00000478896 PSMD10O75832 226 aa14.89□□□□□ -0.03
VCL-205ENST00000478896 ALDH7A1P49419 539 aaKnown RBP14.89□□□□□ -0.03
VCL-205ENST00000478896 CDC42EP1Q00587 391 aa14.89□□□□□ -0.03
VCL-205ENST00000478896 SIGLEC14Q08ET2 396 aa14.89□□□□□ -0.03
VCL-205ENST00000478896 TMEM184AQ6ZMB5 413 aa14.89□□□□□ -0.03
VCL-205ENST00000478896 BMP8AQ7Z5Y6 402 aa14.89□□□□□ -0.03
VCL-205ENST00000478896 RHPN2Q8IUC4 686 aa14.89□□□□□ -0.03
VCL-205ENST00000478896 SLC39A11Q8N1S5 342 aa14.89□□□□□ -0.03
VCL-205ENST00000478896 TMEM87AQ8NBN3 555 aa14.89□□□□□ -0.03
VCL-205ENST00000478896 TMEM169Q96HH4 297 aa14.89□□□□□ -0.03
VCL-205ENST00000478896 FDXACB1Q9BRP7 624 aaPredicted RBP14.89□□□□□ -0.03
VCL-205ENST00000478896 INO80BQ9C086 356 aaPredicted RBP14.89□□□□□ -0.03
VCL-205ENST00000478896 TSHZ2Q9NRE2 1034 aa14.89□□□□□ -0.03
VCL-205ENST00000478896 PIN4Q9Y237 131 aaKnown RBP14.89□□□□□ -0.03
VCL-205ENST00000478896 ZNF318Q5VUA4 2279 aa14.89□□□□□ -0.03
VCL-205ENST00000478896 NT5C1B-RDH14C9J2C7 533 aa14.88□□□□□ -0.03
VCL-205ENST00000478896 HOXB8P17481 243 aaPredicted RBP14.88□□□□□ -0.03
VCL-205ENST00000478896 BCAR1P56945 870 aa14.88□□□□□ -0.03
VCL-205ENST00000478896 EVCP57679 992 aa14.88□□□□□ -0.03
VCL-205ENST00000478896 STK3Q13188 491 aa14.88□□□□□ -0.03
VCL-205ENST00000478896 KCNC3Q14003 757 aa14.88□□□□□ -0.03
VCL-205ENST00000478896 TOB2Q14106 344 aaPredicted RBP14.88□□□□□ -0.03
VCL-205ENST00000478896 NONOQ15233 471 aaKnown RBP eCLIP14.88□□□□□ -0.034e-7■■■■□ 19.6
VCL-205ENST00000478896 TARBP2Q15633 366 aaKnown RBP14.88□□□□□ -0.03
VCL-205ENST00000478896 TPRNQ4KMQ1 711 aa14.88□□□□□ -0.03
VCL-205ENST00000478896 CES5AQ6NT32 575 aa14.88□□□□□ -0.03
VCL-205ENST00000478896 SYCE2Q6PIF2 218 aa14.88□□□□□ -0.03
VCL-205ENST00000478896 ZNF598Q86UK7 904 aaKnown RBP14.88□□□□□ -0.03
VCL-205ENST00000478896 ZNF410Q86VK4 478 aa14.88□□□□□ -0.03
VCL-205ENST00000478896 NLRP4Q96MN2 994 aa14.88□□□□□ -0.03
VCL-205ENST00000478896 NIFKQ9BYG3 293 aaKnown RBP14.88□□□□□ -0.03
VCL-205ENST00000478896 S1PR5Q9H228 398 aa14.88□□□□□ -0.03
VCL-205ENST00000478896 CHST12Q9NRB3 414 aa14.88□□□□□ -0.03
VCL-205ENST00000478896 DDX25Q9UHL0 483 aaKnown RBP14.88□□□□□ -0.03
VCL-205ENST00000478896 NR2E1Q9Y466 385 aa14.88□□□□□ -0.03
VCL-205ENST00000478896 HCFC2Q9Y5Z7 792 aa14.88□□□□□ -0.03
VCL-205ENST00000478896 CYP46A1Q9Y6A2 500 aa14.88□□□□□ -0.03
VCL-205ENST00000478896 KMT2EQ8IZD2 1858 aa14.88□□□□□ -0.03
VCL-205ENST00000478896 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.87□□□□□ -0.03
VCL-205ENST00000478896 C2orf71A6NGG8 1288 aa14.87□□□□□ -0.03
VCL-205ENST00000478896 DDX11L8A8MPP1 907 aa14.87□□□□□ -0.03
VCL-205ENST00000478896 SKIP12755 728 aa14.87□□□□□ -0.03
VCL-205ENST00000478896 RNASELQ05823 741 aaKnown RBP14.87□□□□□ -0.03
VCL-205ENST00000478896 PTPN21Q16825 1174 aa14.87□□□□□ -0.03
VCL-205ENST00000478896 INF2Q27J81 1249 aa14.87□□□□□ -0.03
VCL-205ENST00000478896 LONRF3Q496Y0 759 aa14.87□□□□□ -0.03
VCL-205ENST00000478896 PLA2G4FQ68DD2 849 aa14.87□□□□□ -0.03
VCL-205ENST00000478896 MOXD1Q6UVY6 613 aa14.87□□□□□ -0.03
VCL-205ENST00000478896 CATSPER4Q7RTX7 472 aa14.87□□□□□ -0.03
VCL-205ENST00000478896 DAGLBQ8NCG7 672 aa14.87□□□□□ -0.03
VCL-205ENST00000478896 JPH2Q9BR39 696 aaPredicted RBP14.87□□□□□ -0.03
VCL-205ENST00000478896 LARP6Q9BRS8 491 aaKnown RBP14.87□□□□□ -0.03
VCL-205ENST00000478896 SLKQ9H2G2 1235 aaPredicted RBP14.87□□□□□ -0.03
VCL-205ENST00000478896 SUCLA2Q9P2R7 463 aaPredicted RBP14.87□□□□□ -0.03
VCL-205ENST00000478896 INPP5FQ9Y2H2 1132 aa14.87□□□□□ -0.03
VCL-205ENST00000478896 CYP3A7-CYP3A51PA0A087WV96 503 aa14.86□□□□□ -0.03
VCL-205ENST00000478896 CCDC194A0A1B0GVG4 234 aa14.86□□□□□ -0.03
VCL-205ENST00000478896 CARNS1A5YM72 827 aa14.86□□□□□ -0.03
VCL-205ENST00000478896 CYP3A7P24462 503 aa14.86□□□□□ -0.03
VCL-205ENST00000478896 PHKA2P46019 1235 aa14.86□□□□□ -0.03
VCL-205ENST00000478896 RAB27AP51159 221 aa14.86□□□□□ -0.03
VCL-205ENST00000478896 PTPN5P54829 565 aa14.86□□□□□ -0.03
VCL-205ENST00000478896 PSMC5P62195 406 aa14.86□□□□□ -0.03
VCL-205ENST00000478896 LETM2Q2VYF4 491 aa14.86□□□□□ -0.03
VCL-205ENST00000478896 GALNT17Q6IS24 598 aa14.86□□□□□ -0.03
VCL-205ENST00000478896 GLB1LQ6UWU2 654 aa14.86□□□□□ -0.03
VCL-205ENST00000478896 KRT25Q7Z3Z0 450 aa14.86□□□□□ -0.03
VCL-205ENST00000478896 FBXL6Q8N531 539 aa14.86□□□□□ -0.03
VCL-205ENST00000478896 MRPL43Q8N983 215 aaKnown RBP14.86□□□□□ -0.03
VCL-205ENST00000478896 ETNPPLQ8TBG4 499 aa14.86□□□□□ -0.03
VCL-205ENST00000478896 RSPH1Q8WYR4 309 aa14.86□□□□□ -0.03
VCL-205ENST00000478896 LPPQ93052 612 aa14.86□□□□□ -0.03
VCL-205ENST00000478896 ZNF274Q96GC6 653 aaPredicted RBP14.86□□□□□ -0.03
VCL-205ENST00000478896 AIFM3Q96NN9 605 aa14.86□□□□□ -0.03
VCL-205ENST00000478896 PRRX2Q99811 253 aa14.86□□□□□ -0.03
VCL-205ENST00000478896 ZSWIM6Q9HCJ5 1215 aa14.86□□□□□ -0.03
VCL-205ENST00000478896 FAM105AQ9NUU6 356 aa14.86□□□□□ -0.03
VCL-205ENST00000478896 IGKV6-21A0A0C4DH24 114 aa14.85□□□□□ -0.03
VCL-205ENST00000478896 SPDYE4A6NLX3 237 aa14.85□□□□□ -0.03
VCL-205ENST00000478896 M0R2N6 131 aa14.85□□□□□ -0.03
VCL-205ENST00000478896 SLC37A4O43826 429 aa14.85□□□□□ -0.03
VCL-205ENST00000478896 DKC1O60832 514 aaKnown RBP eCLIP14.85□□□□□ -0.03
VCL-205ENST00000478896 CLASP2O75122 1294 aaKnown RBP14.85□□□□□ -0.03
VCL-205ENST00000478896 MAFO75444 373 aaPredicted RBP14.85□□□□□ -0.03
VCL-205ENST00000478896 CXCL14O95715 111 aa14.85□□□□□ -0.03
VCL-205ENST00000478896 ITIH3Q06033 890 aa14.85□□□□□ -0.03
VCL-205ENST00000478896 B3GNT9Q6UX72 402 aa14.85□□□□□ -0.03
VCL-205ENST00000478896 KSR1Q8IVT5 923 aa14.85□□□□□ -0.03
VCL-205ENST00000478896 VPS52Q8N1B4 723 aa14.85□□□□□ -0.03
VCL-205ENST00000478896 PRSS33Q8NF86 280 aa14.85□□□□□ -0.03
VCL-205ENST00000478896 SLC7A3Q8WY07 619 aa14.85□□□□□ -0.03
VCL-205ENST00000478896 NECTIN4Q96NY8 510 aa14.85□□□□□ -0.03
VCL-205ENST00000478896 CEP89Q96ST8 783 aa14.85□□□□□ -0.03
VCL-205ENST00000478896 GBP3Q9H0R5 595 aa14.85□□□□□ -0.03
VCL-205ENST00000478896 POMKQ9H5K3 350 aa14.85□□□□□ -0.03
VCL-205ENST00000478896 CDH22Q9UJ99 828 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms