RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 SLC12A3P55017 1021 aa29.73■■■□□ 2.35
CCM2-211ENST00000478582 MXD4Q14582 209 aaPredicted RBP29.73■■■□□ 2.35
CCM2-211ENST00000478582 RINT1Q6NUQ1 792 aa29.73■■■□□ 2.35
CCM2-211ENST00000478582 APBB2Q92870 758 aa29.73■■■□□ 2.35
CCM2-211ENST00000478582 STK17AQ9UEE5 414 aa29.73■■■□□ 2.35
CCM2-211ENST00000478582 FOSL2P15408 326 aa29.72■■■□□ 2.35
CCM2-211ENST00000478582 LAMTOR4Q0VGL1 99 aa29.72■■■□□ 2.35
CCM2-211ENST00000478582 C1orf186Q6ZWK4 172 aa29.72■■■□□ 2.35
CCM2-211ENST00000478582 TMEM40Q8WWA1 233 aa29.72■■■□□ 2.35
CCM2-211ENST00000478582 SEPT8Q92599 483 aa29.72■■■□□ 2.35
CCM2-211ENST00000478582 RAD54LQ92698 747 aa29.72■■■□□ 2.35
CCM2-211ENST00000478582 PPP1R16BQ96T49 567 aa29.72■■■□□ 2.35
CCM2-211ENST00000478582 OSMRQ99650 979 aa29.72■■■□□ 2.35
CCM2-211ENST00000478582 AGO3Q9H9G7 860 aaKnown RBP29.72■■■□□ 2.35
CCM2-211ENST00000478582 KCND2Q9NZV8 630 aa29.72■■■□□ 2.35
CCM2-211ENST00000478582 GINS2Q9Y248 185 aa29.72■■■□□ 2.35
CCM2-211ENST00000478582 PTPRSQ13332 1948 aa29.71■■■□□ 2.35
CCM2-211ENST00000478582 EIF4BP23588 611 aaKnown RBP29.71■■■□□ 2.35
CCM2-211ENST00000478582 DEFB103AP81534 67 aa29.71■■■□□ 2.35
CCM2-211ENST00000478582 POU5F1BQ06416 359 aa29.71■■■□□ 2.35
CCM2-211ENST00000478582 RRAGBQ5VZM2 374 aa29.71■■■□□ 2.35
CCM2-211ENST00000478582 RESP18Q5W5W9 173 aa29.71■■■□□ 2.35
CCM2-211ENST00000478582 PPP2R2DQ66LE6 453 aa29.71■■■□□ 2.35
CCM2-211ENST00000478582 ADALQ6DHV7 355 aa29.71■■■□□ 2.35
CCM2-211ENST00000478582 CCDC73Q6ZRK6 1079 aa29.71■■■□□ 2.35
CCM2-211ENST00000478582 NLRP7Q8WX94 980 aa29.71■■■□□ 2.35
CCM2-211ENST00000478582 IFIH1Q9BYX4 1025 aaKnown RBP29.71■■■□□ 2.35
CCM2-211ENST00000478582 MYO9BQ13459 2157 aa29.71■■■□□ 2.35
CCM2-211ENST00000478582 DARSP14868 501 aaKnown RBP29.7■■■□□ 2.35
CCM2-211ENST00000478582 NAALADL2Q58DX5 795 aa29.7■■■□□ 2.35
CCM2-211ENST00000478582 ODR4Q5SWX8 454 aa29.7■■■□□ 2.35
CCM2-211ENST00000478582 KSR1Q8IVT5 923 aa29.7■■■□□ 2.35
CCM2-211ENST00000478582 LARP4BQ92615 738 aaKnown RBP29.7■■■□□ 2.35
CCM2-211ENST00000478582 RUSC1Q9BVN2 902 aa29.7■■■□□ 2.35
CCM2-211ENST00000478582 TIPINQ9BVW5 301 aa29.7■■■□□ 2.35
CCM2-211ENST00000478582 GCOM2Q9BZD3 368 aaPredicted RBP29.7■■■□□ 2.35
CCM2-211ENST00000478582 POLR3FQ9H1D9 316 aaPredicted RBP29.7■■■□□ 2.35
CCM2-211ENST00000478582 PRDM12Q9H4Q4 367 aa29.7■■■□□ 2.35
CCM2-211ENST00000478582 NOC2LQ9Y3T9 749 aaKnown RBP29.7■■■□□ 2.35
CCM2-211ENST00000478582 A0A087WZ62 844 aa29.69■■■□□ 2.34
CCM2-211ENST00000478582 A0A087X0B3 334 aa29.69■■■□□ 2.34
CCM2-211ENST00000478582 RBAK-RBAKDNI3L0D1 243 aa29.69■■■□□ 2.34
CCM2-211ENST00000478582 RPS6KA5O75582 802 aa29.69■■■□□ 2.34
CCM2-211ENST00000478582 CA3P07451 260 aa29.69■■■□□ 2.34
CCM2-211ENST00000478582 GUCY2CP25092 1073 aa29.69■■■□□ 2.34
CCM2-211ENST00000478582 FAM102BQ5T8I3 360 aa29.69■■■□□ 2.34
CCM2-211ENST00000478582 MAEAQ7L5Y9 396 aa29.69■■■□□ 2.34
CCM2-211ENST00000478582 SLC17A8Q8NDX2 589 aa29.69■■■□□ 2.34
CCM2-211ENST00000478582 ASAP3Q8TDY4 903 aa29.69■■■□□ 2.34
CCM2-211ENST00000478582 FDXACB1Q9BRP7 624 aaPredicted RBP29.69■■■□□ 2.34
CCM2-211ENST00000478582 IFT122Q9HBG6 1241 aa29.69■■■□□ 2.34
CCM2-211ENST00000478582 GPRC5CQ9NQ84 441 aa29.69■■■□□ 2.34
CCM2-211ENST00000478582 PADI3Q9ULW8 664 aa29.69■■■□□ 2.34
CCM2-211ENST00000478582 TLL1O43897 1013 aa29.68■■■□□ 2.34
CCM2-211ENST00000478582 SSBP05455 408 aaKnown RBP eCLIP29.68■■■□□ 2.34
CCM2-211ENST00000478582 GLRA2P23416 452 aa29.68■■■□□ 2.34
CCM2-211ENST00000478582 CD52P31358 61 aa29.68■■■□□ 2.34
CCM2-211ENST00000478582 TFDP1Q14186 410 aa29.68■■■□□ 2.34
CCM2-211ENST00000478582 IFNLR1Q8IU57 520 aaPredicted RBP29.68■■■□□ 2.34
CCM2-211ENST00000478582 MAFAQ8NHW3 353 aaPredicted RBP29.68■■■□□ 2.34
CCM2-211ENST00000478582 KIFAP3Q92845 792 aa29.68■■■□□ 2.34
CCM2-211ENST00000478582 ZNF668Q96K58 619 aaPredicted RBP29.68■■■□□ 2.34
CCM2-211ENST00000478582 NLRP4Q96MN2 994 aa29.68■■■□□ 2.34
CCM2-211ENST00000478582 SCLT1Q96NL6 688 aa29.68■■■□□ 2.34
CCM2-211ENST00000478582 GAS2L1Q99501 681 aaPredicted RBP29.68■■■□□ 2.34
CCM2-211ENST00000478582 ZBED2Q9BTP6 218 aa29.68■■■□□ 2.34
CCM2-211ENST00000478582 INO80BQ9C086 356 aaPredicted RBP29.68■■■□□ 2.34
CCM2-211ENST00000478582 FAM13BQ9NYF5 915 aa29.68■■■□□ 2.34
CCM2-211ENST00000478582 TCHHQ07283 1943 aa29.67■■■□□ 2.34
CCM2-211ENST00000478582 GPR182O15218 404 aa29.67■■■□□ 2.34
CCM2-211ENST00000478582 SRGAP2CP0DJJ0 459 aa29.67■■■□□ 2.34
CCM2-211ENST00000478582 CMA1P23946 247 aa29.67■■■□□ 2.34
CCM2-211ENST00000478582 PAK2Q13177 524 aa29.67■■■□□ 2.34
CCM2-211ENST00000478582 MCM6Q14566 821 aa29.67■■■□□ 2.34
CCM2-211ENST00000478582 LIN28BQ6ZN17 250 aaKnown RBP eCLIP29.67■■■□□ 2.34
CCM2-211ENST00000478582 TMCO2Q7Z6W1 182 aaPredicted RBP29.67■■■□□ 2.34
CCM2-211ENST00000478582 RNF149Q8NC42 400 aa29.67■■■□□ 2.34
CCM2-211ENST00000478582 PANK2Q9BZ23 570 aa29.67■■■□□ 2.34
CCM2-211ENST00000478582 ERVK-5Q9HDB9 667 aa29.67■■■□□ 2.34
CCM2-211ENST00000478582 MICAL3Q7RTP6 2002 aa29.67■■■□□ 2.34
CCM2-211ENST00000478582 GJB5O95377 273 aa29.66■■■□□ 2.34
CCM2-211ENST00000478582 STAT6P42226 847 aa29.66■■■□□ 2.34
CCM2-211ENST00000478582 CAPSQ13938 189 aa29.66■■■□□ 2.34
CCM2-211ENST00000478582 ARSHQ5FYA8 562 aa29.66■■■□□ 2.34
CCM2-211ENST00000478582 SRGAP1Q7Z6B7 1085 aa29.66■■■□□ 2.34
CCM2-211ENST00000478582 FAM228AQ86W67 206 aa29.66■■■□□ 2.34
CCM2-211ENST00000478582 NFKBIZQ9BYH8 718 aa29.66■■■□□ 2.34
CCM2-211ENST00000478582 GDPD2Q9HCC8 539 aa29.66■■■□□ 2.34
CCM2-211ENST00000478582 ST3GAL5Q9UNP4 418 aa29.66■■■□□ 2.34
CCM2-211ENST00000478582 CDH23Q9H251 3354 aa29.65■■■□□ 2.34
CCM2-211ENST00000478582 AMHP03971 560 aa29.65■■■□□ 2.34
CCM2-211ENST00000478582 PTENP60484 403 aa29.65■■■□□ 2.34
CCM2-211ENST00000478582 E2F4Q16254 413 aa29.65■■■□□ 2.34
CCM2-211ENST00000478582 GPBP1Q86WP2 473 aa29.65■■■□□ 2.34
CCM2-211ENST00000478582 PDILTQ8N807 584 aa29.65■■■□□ 2.34
CCM2-211ENST00000478582 RAD9AQ99638 391 aa29.65■■■□□ 2.34
CCM2-211ENST00000478582 FTHL17Q9BXU8 183 aa29.65■■■□□ 2.34
CCM2-211ENST00000478582 CUEDC2Q9H467 287 aa29.65■■■□□ 2.34
CCM2-211ENST00000478582 A0A1W2PQ27 194 aa29.64■■■□□ 2.34
CCM2-211ENST00000478582 A0A1W2PQ64 194 aa29.64■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms