RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 KCMF1Q9P0J7 381 aa5.13□□□□□ -1.59
HPS3-205ENST00000478525 DNAI1Q9UI46 699 aa5.13□□□□□ -1.59
HPS3-205ENST00000478525 GRID2IPA4D2P6 1211 aa5.12□□□□□ -1.59
HPS3-205ENST00000478525 LMO1P25800 156 aa5.12□□□□□ -1.59
HPS3-205ENST00000478525 KIF11P52732 1056 aa5.12□□□□□ -1.59
HPS3-205ENST00000478525 CCDC142Q17RM4 750 aa5.12□□□□□ -1.59
HPS3-205ENST00000478525 ZC3H12BQ5HYM0 836 aaKnown RBP5.12□□□□□ -1.59
HPS3-205ENST00000478525 NBPF6Q5VWK0 638 aa5.12□□□□□ -1.59
HPS3-205ENST00000478525 LRRC55Q6ZSA7 311 aa5.12□□□□□ -1.59
HPS3-205ENST00000478525 SYNE4Q8N205 404 aa5.12□□□□□ -1.59
HPS3-205ENST00000478525 PROKR1Q8TCW9 393 aa5.12□□□□□ -1.59
HPS3-205ENST00000478525 MAML3Q96JK9 1138 aa5.12□□□□□ -1.59
HPS3-205ENST00000478525 NBPF4Q96M43 638 aa5.12□□□□□ -1.59
HPS3-205ENST00000478525 ZNF512Q96ME7 567 aaPredicted RBP5.12□□□□□ -1.59
HPS3-205ENST00000478525 WDR92Q96MX6 357 aa5.12□□□□□ -1.59
HPS3-205ENST00000478525 HAPLN2Q9GZV7 340 aa5.12□□□□□ -1.59
HPS3-205ENST00000478525 UBA6A0AVT1 1052 aaPredicted RBP5.11□□□□□ -1.59
HPS3-205ENST00000478525 DVL2O14641 736 aa5.11□□□□□ -1.59
HPS3-205ENST00000478525 STC2O76061 302 aa5.11□□□□□ -1.59
HPS3-205ENST00000478525 IPO13O94829 963 aaKnown RBP5.11□□□□□ -1.59
HPS3-205ENST00000478525 RHOBTB3O94955 611 aa5.11□□□□□ -1.59
HPS3-205ENST00000478525 NPTXRO95502 500 aa5.11□□□□□ -1.59
HPS3-205ENST00000478525 ABHD16AO95870 558 aa5.11□□□□□ -1.59
HPS3-205ENST00000478525 JUNP05412 331 aaKnown RBP5.11□□□□□ -1.59
HPS3-205ENST00000478525 ITGB1P05556 798 aa5.11□□□□□ -1.59
HPS3-205ENST00000478525 HNRNPLP14866 589 aaKnown RBP eCLIP5.11□□□□□ -1.59
HPS3-205ENST00000478525 MECP2P51608 486 aaKnown RBP5.11□□□□□ -1.59
HPS3-205ENST00000478525 NAIF1Q69YI7 327 aaPredicted RBP5.11□□□□□ -1.59
HPS3-205ENST00000478525 PRIMA1Q86XR5 153 aa5.11□□□□□ -1.59
HPS3-205ENST00000478525 ARL8AQ96BM9 186 aa5.11□□□□□ -1.59
HPS3-205ENST00000478525 ZNF764Q96H86 408 aaPredicted RBP5.11□□□□□ -1.59
HPS3-205ENST00000478525 SIRPGQ9P1W8 387 aa5.11□□□□□ -1.59
HPS3-205ENST00000478525 NCDNQ9UBB6 729 aa5.11□□□□□ -1.59
HPS3-205ENST00000478525 PACSIN3Q9UKS6 424 aa5.11□□□□□ -1.59
HPS3-205ENST00000478525 FZD1Q9UP38 647 aa5.11□□□□□ -1.59
HPS3-205ENST00000478525 HS3ST4Q9Y661 456 aa5.11□□□□□ -1.59
HPS3-205ENST00000478525 FAM221BA6H8Z2 402 aa5.1□□□□□ -1.59
HPS3-205ENST00000478525 MFAP3LO75121 409 aa5.1□□□□□ -1.59
HPS3-205ENST00000478525 ZFP36P26651 326 aaKnown RBP5.1□□□□□ -1.59
HPS3-205ENST00000478525 SERINC3Q13530 473 aa5.1□□□□□ -1.59
HPS3-205ENST00000478525 SPIDRQ14159 915 aa5.1□□□□□ -1.59
HPS3-205ENST00000478525 TTC38Q5R3I4 469 aa5.1□□□□□ -1.59
HPS3-205ENST00000478525 LY6G5CQ5SRR4 150 aa5.1□□□□□ -1.59
HPS3-205ENST00000478525 PRAMEF9Q5VWM5 478 aa5.1□□□□□ -1.59
HPS3-205ENST00000478525 KCNV1Q6PIU1 500 aa5.1□□□□□ -1.59
HPS3-205ENST00000478525 BMP8AQ7Z5Y6 402 aa5.1□□□□□ -1.59
HPS3-205ENST00000478525 NTN5Q8WTR8 489 aaPredicted RBP5.1□□□□□ -1.59
HPS3-205ENST00000478525 TRIM39Q9HCM9 518 aa5.1□□□□□ -1.59
HPS3-205ENST00000478525 SORCS3Q9UPU3 1222 aa5.1□□□□□ -1.59
HPS3-205ENST00000478525 KCNQ2O43526 872 aa5.09□□□□□ -1.59
HPS3-205ENST00000478525 MRPS21P82921 87 aaKnown RBP5.09□□□□□ -1.59
HPS3-205ENST00000478525 MYBPC3Q14896 1274 aa5.09□□□□□ -1.59
HPS3-205ENST00000478525 PTPAQ15257 358 aa5.09□□□□□ -1.59
HPS3-205ENST00000478525 DCAF17Q5H9S7 520 aaPredicted RBP5.09□□□□□ -1.59
HPS3-205ENST00000478525 CXorf67Q86X51 503 aaPredicted RBP5.09□□□□□ -1.59
HPS3-205ENST00000478525 CMTM4Q8IZR5 234 aa5.09□□□□□ -1.59
HPS3-205ENST00000478525 THAP3Q8WTV1 239 aaPredicted RBP5.09□□□□□ -1.59
HPS3-205ENST00000478525 ST8SIA2Q92186 375 aa5.09□□□□□ -1.59
HPS3-205ENST00000478525 DEPDC7Q96QD5 511 aa5.09□□□□□ -1.59
HPS3-205ENST00000478525 MRPL4Q9BYD3 311 aaKnown RBP5.09□□□□□ -1.59
HPS3-205ENST00000478525 C14orf93Q9H972 538 aaKnown RBP5.09□□□□□ -1.59
HPS3-205ENST00000478525 PPP1R1BQ9UD71 204 aaPredicted RBP5.09□□□□□ -1.59
HPS3-205ENST00000478525 ZNHIT2Q9UHR6 403 aa5.09□□□□□ -1.59
HPS3-205ENST00000478525 M0R2C6 588 aa5.08□□□□□ -1.6
HPS3-205ENST00000478525 GLRX3O76003 335 aaKnown RBP5.08□□□□□ -1.6
HPS3-205ENST00000478525 GNAT2P19087 354 aa5.08□□□□□ -1.6
HPS3-205ENST00000478525 HK1P19367 917 aa5.08□□□□□ -1.6
HPS3-205ENST00000478525 KIR2DL3P43628 341 aa5.08□□□□□ -1.6
HPS3-205ENST00000478525 ARHGAP44Q17R89 818 aa5.08□□□□□ -1.6
HPS3-205ENST00000478525 FAM214AQ32MH5 1076 aa5.08□□□□□ -1.6
HPS3-205ENST00000478525 HECTD2Q5U5R9 776 aa5.08□□□□□ -1.6
HPS3-205ENST00000478525 LRCH2Q5VUJ6 765 aa5.08□□□□□ -1.6
HPS3-205ENST00000478525 BEND2Q8NDZ0 799 aa5.08□□□□□ -1.6
HPS3-205ENST00000478525 CPT1CQ8TCG5 803 aa5.08□□□□□ -1.6
HPS3-205ENST00000478525 C16orf92Q96LL3 132 aa5.08□□□□□ -1.6
HPS3-205ENST00000478525 RIOX1Q9H6W3 641 aa5.08□□□□□ -1.6
HPS3-205ENST00000478525 SNTG2Q9NY99 539 aa5.08□□□□□ -1.6
HPS3-205ENST00000478525 PTGFRNQ9P2B2 879 aa5.08□□□□□ -1.6
HPS3-205ENST00000478525 MTSS1O43312 755 aa5.07□□□□□ -1.6
HPS3-205ENST00000478525 PTX3P26022 381 aaPredicted RBP5.07□□□□□ -1.6
HPS3-205ENST00000478525 NPEPPSP55786 919 aa5.07□□□□□ -1.6
HPS3-205ENST00000478525 PLEKHG4Q58EX7 1191 aa5.07□□□□□ -1.6
HPS3-205ENST00000478525 APBB1IPQ7Z5R6 666 aaPredicted RBP5.07□□□□□ -1.6
HPS3-205ENST00000478525 CHST14Q8NCH0 376 aa5.07□□□□□ -1.6
HPS3-205ENST00000478525 BBC3Q96PG8 261 aaPredicted RBP5.07□□□□□ -1.6
HPS3-205ENST00000478525 TUBGCP5Q96RT8 1024 aa5.07□□□□□ -1.6
HPS3-205ENST00000478525 PCIF1Q9H4Z3 704 aa5.07□□□□□ -1.6
HPS3-205ENST00000478525 ZNF768Q9H5H4 540 aaKnown RBP5.07□□□□□ -1.6
HPS3-205ENST00000478525 ACSS2Q9NR19 701 aa5.07□□□□□ -1.6
HPS3-205ENST00000478525 IGSF5Q9NSI5 407 aa5.07□□□□□ -1.6
HPS3-205ENST00000478525 TRIM24O15164 1050 aa5.06□□□□□ -1.6
HPS3-205ENST00000478525 DAPK3O43293 454 aa5.06□□□□□ -1.6
HPS3-205ENST00000478525 B3GALT2O43825 422 aa5.06□□□□□ -1.6
HPS3-205ENST00000478525 SCAF4O95104 1147 aaKnown RBP5.06□□□□□ -1.6
HPS3-205ENST00000478525 PTTG1IPP53801 180 aa5.06□□□□□ -1.6
HPS3-205ENST00000478525 BCAR1P56945 870 aa5.06□□□□□ -1.6
HPS3-205ENST00000478525 TIGD2Q4W5G0 525 aa5.06□□□□□ -1.6
HPS3-205ENST00000478525 ZCCHC8Q6NZY4 707 aaKnown RBP5.06□□□□□ -1.6
HPS3-205ENST00000478525 KIAA1958Q8N8K9 716 aa5.06□□□□□ -1.6
HPS3-205ENST00000478525 JMYQ8N9B5 988 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms