RNA–Protein interactions for RNA: ENST00000478459.5

EPHB4-205, Transcript of EPH receptor B4, humanhuman

TSL 2

Gene EPHB4, Length 965 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-205ENST00000478459 SLC7A3Q8WY07 619 aa21.31■■□□□ 1
EPHB4-205ENST00000478459 LLPHQ9BRT6 129 aaKnown RBP21.31■■□□□ 1
EPHB4-205ENST00000478459 ZSWIM4Q9H7M6 989 aa21.31■■□□□ 1
EPHB4-205ENST00000478459 PIN4Q9Y237 131 aaKnown RBP21.31■■□□□ 1
EPHB4-205ENST00000478459 COL4A3BPQ9Y5P4 624 aa21.31■■□□□ 1
EPHB4-205ENST00000478459 LINC01565O15544 149 aa21.3■■□□□ 1
EPHB4-205ENST00000478459 DKC1O60832 514 aaKnown RBP eCLIP21.3■■□□□ 1
EPHB4-205ENST00000478459 RBM25P49756 843 aaKnown RBP21.3■■□□□ 1
EPHB4-205ENST00000478459 FAM189BP81408 668 aa21.3■■□□□ 1
EPHB4-205ENST00000478459 HYAL1Q12794 435 aa21.3■■□□□ 1
EPHB4-205ENST00000478459 EMC2Q15006 297 aa21.3■■□□□ 1
EPHB4-205ENST00000478459 LRRC55Q6ZSA7 311 aa21.3■■□□□ 1
EPHB4-205ENST00000478459 CATSPER4Q7RTX7 472 aa21.3■■□□□ 1
EPHB4-205ENST00000478459 ADGRD2Q7Z7M1 963 aa21.3■■□□□ 1
EPHB4-205ENST00000478459 RBM23Q86U06 439 aaKnown RBP21.3■■□□□ 1
EPHB4-205ENST00000478459 C4orf19Q8IY42 314 aa21.3■■□□□ 1
EPHB4-205ENST00000478459 SPPL3Q8TCT6 385 aa21.3■■□□□ 1
EPHB4-205ENST00000478459 POF1BQ8WVV4 589 aa21.3■■□□□ 1
EPHB4-205ENST00000478459 MTMR9Q96QG7 549 aa21.3■■□□□ 1
EPHB4-205ENST00000478459 TECP42680 631 aa21.29■■□□□ 1
EPHB4-205ENST00000478459 CLLU1OSQ5K130 101 aa21.29■■□□□ 1
EPHB4-205ENST00000478459 TWF2Q6IBS0 349 aaKnown RBP21.29■■□□□ 1
EPHB4-205ENST00000478459 MAEAQ7L5Y9 396 aa21.29■■□□□ 1
EPHB4-205ENST00000478459 OTUD6AQ7L8S5 288 aa21.29■■□□□ 1
EPHB4-205ENST00000478459 ABI1Q8IZP0 508 aa21.29■■□□□ 1
EPHB4-205ENST00000478459 FBXO18Q8NFZ0 1043 aa21.29■■□□□ 1
EPHB4-205ENST00000478459 CASD1Q96PB1 797 aa21.29■■□□□ 1
EPHB4-205ENST00000478459 CWH43Q9H720 699 aa21.29■■□□□ 1
EPHB4-205ENST00000478459 MINDY3Q9H8M7 445 aa21.29■■□□□ 1
EPHB4-205ENST00000478459 SH2B1Q9NRF2 756 aaPredicted RBP21.29■■□□□ 1
EPHB4-205ENST00000478459 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.28■■□□□ 1
EPHB4-205ENST00000478459 MEIS3P2A8K0S8 358 aa21.28■■□□□ 1
EPHB4-205ENST00000478459 IL9P15248 144 aa21.28■■□□□ 1
EPHB4-205ENST00000478459 SFPQP23246 707 aaKnown RBP eCLIP21.28■■□□□ 1
EPHB4-205ENST00000478459 LAMTOR4Q0VGL1 99 aa21.28■■□□□ 1
EPHB4-205ENST00000478459 RABEP1Q15276 862 aa21.28■■□□□ 1
EPHB4-205ENST00000478459 THNSL1Q8IYQ7 743 aa21.28■■□□□ 1
EPHB4-205ENST00000478459 COLGALT1Q8NBJ5 622 aa21.28■■□□□ 1
EPHB4-205ENST00000478459 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.28■■□□□ 1
EPHB4-205ENST00000478459 MICAL1Q8TDZ2 1067 aa21.28■■□□□ 1
EPHB4-205ENST00000478459 CCDC43Q96MW1 224 aaKnown RBP21.28■■□□□ 1
EPHB4-205ENST00000478459 MTRQ99707 1265 aa21.28■■□□□ 1
EPHB4-205ENST00000478459 PLVAPQ9BX97 442 aa21.28■■□□□ 1
EPHB4-205ENST00000478459 DHX33Q9H6R0 707 aaKnown RBP21.28■■□□□ 1
EPHB4-205ENST00000478459 PCDHB12Q9Y5F1 795 aa21.28■■□□□ 1
EPHB4-205ENST00000478459 ATF7P17544 494 aaPredicted RBP21.27■■□□□ 1
EPHB4-205ENST00000478459 RFC5P40937 340 aa21.27■■□□□ 1
EPHB4-205ENST00000478459 HMGN5P82970 282 aaKnown RBP21.27■■□□□ 1
EPHB4-205ENST00000478459 DLX2Q07687 328 aaPredicted RBP21.27■■□□□ 1
EPHB4-205ENST00000478459 TTC38Q5R3I4 469 aa21.27■■□□□ 1
EPHB4-205ENST00000478459 ZNF410Q86VK4 478 aa21.27■■□□□ 1
EPHB4-205ENST00000478459 RNF149Q8NC42 400 aa21.27■■□□□ 1
EPHB4-205ENST00000478459 PSPC1Q8WXF1 523 aaKnown RBP21.27■■□□□ 1
EPHB4-205ENST00000478459 P2RX5Q93086 422 aa21.27■■□□□ 1
EPHB4-205ENST00000478459 HSD17B14Q9BPX1 270 aa21.27■■□□□ 1
EPHB4-205ENST00000478459 JPH2Q9BR39 696 aaPredicted RBP21.27■■□□□ 1
EPHB4-205ENST00000478459 TMEM117Q9H0C3 514 aa21.27■■□□□ 1
EPHB4-205ENST00000478459 LMAN2LQ9H0V9 348 aa21.27■■□□□ 1
EPHB4-205ENST00000478459 ELAC1Q9H777 363 aaKnown RBP21.27■■□□□ 1
EPHB4-205ENST00000478459 IFT122Q9HBG6 1241 aa21.27■■□□□ 1
EPHB4-205ENST00000478459 XPNPEP1Q9NQW7 623 aa21.27■■□□□ 1
EPHB4-205ENST00000478459 INPP5FQ9Y2H2 1132 aa21.27■■□□□ 1
EPHB4-205ENST00000478459 NT5C1B-RDH14C9J2C7 533 aa21.26■□□□□ 0.99
EPHB4-205ENST00000478459 PER2O15055 1255 aa21.26■□□□□ 0.99
EPHB4-205ENST00000478459 USO1O60763 962 aaKnown RBP21.26■□□□□ 0.99
EPHB4-205ENST00000478459 MED24O75448 989 aa21.26■□□□□ 0.99
EPHB4-205ENST00000478459 FGF18O76093 207 aa21.26■□□□□ 0.99
EPHB4-205ENST00000478459 PTCRAQ6ISU1 281 aaPredicted RBP21.26■□□□□ 0.99
EPHB4-205ENST00000478459 NOSTRINQ8IVI9 506 aa21.26■□□□□ 0.99
EPHB4-205ENST00000478459 ASAP3Q8TDY4 903 aa21.26■□□□□ 0.99
EPHB4-205ENST00000478459 FOXP1Q9H334 677 aaPredicted RBP21.26■□□□□ 0.99
EPHB4-205ENST00000478459 A0A0U1RQF3 1178 aa21.25■□□□□ 0.99
EPHB4-205ENST00000478459 ST18O60284 1047 aa21.25■□□□□ 0.99
EPHB4-205ENST00000478459 OR52Z1P0C646 297 aa21.25■□□□□ 0.99
EPHB4-205ENST00000478459 PHKA2P46019 1235 aa21.25■□□□□ 0.99
EPHB4-205ENST00000478459 NRIP1P48552 1158 aa21.25■□□□□ 0.99
EPHB4-205ENST00000478459 ERVFC1P60507 584 aa21.25■□□□□ 0.99
EPHB4-205ENST00000478459 RBM10P98175 930 aaKnown RBP21.25■□□□□ 0.99
EPHB4-205ENST00000478459 MCTP1Q6DN14 999 aa21.25■□□□□ 0.99
EPHB4-205ENST00000478459 POTEGQ6S5H5 508 aa21.25■□□□□ 0.99
EPHB4-205ENST00000478459 FERMT3Q86UX7 667 aa21.25■□□□□ 0.99
EPHB4-205ENST00000478459 PABPC5Q96DU9 382 aaKnown RBP21.25■□□□□ 0.99
EPHB4-205ENST00000478459 UPF2Q9HAU5 1272 aaKnown RBP21.25■□□□□ 0.99
EPHB4-205ENST00000478459 POLD4Q9HCU8 107 aa21.25■□□□□ 0.99
EPHB4-205ENST00000478459 AAASQ9NRG9 546 aa21.25■□□□□ 0.99
EPHB4-205ENST00000478459 RNF216Q9NWF9 866 aaPredicted RBP21.25■□□□□ 0.99
EPHB4-205ENST00000478459 LTBRP36941 435 aa21.24■□□□□ 0.99
EPHB4-205ENST00000478459 CDC42EP1Q00587 391 aa21.24■□□□□ 0.99
EPHB4-205ENST00000478459 LEXMQ3ZCV2 418 aa21.24■□□□□ 0.99
EPHB4-205ENST00000478459 PLPP4Q5VZY2 271 aa21.24■□□□□ 0.99
EPHB4-205ENST00000478459 ZNF598Q86UK7 904 aaKnown RBP21.24■□□□□ 0.99
EPHB4-205ENST00000478459 ZNF710Q8N1W2 664 aa21.24■□□□□ 0.99
EPHB4-205ENST00000478459 CPB2Q96IY4 423 aa21.24■□□□□ 0.99
EPHB4-205ENST00000478459 TMX3Q96JJ7 454 aa21.24■□□□□ 0.99
EPHB4-205ENST00000478459 INO80BQ9C086 356 aaPredicted RBP21.24■□□□□ 0.99
EPHB4-205ENST00000478459 GBP3Q9H0R5 595 aa21.24■□□□□ 0.99
EPHB4-205ENST00000478459 GPRC5CQ9NQ84 441 aa21.24■□□□□ 0.99
EPHB4-205ENST00000478459 DACT1Q9NYF0 836 aa21.24■□□□□ 0.99
EPHB4-205ENST00000478459 NCOR1O75376 2440 aa21.23■□□□□ 0.99
EPHB4-205ENST00000478459 SPATA31C1P0DKV0 1188 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms