RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 NLRP7Q8WX94 980 aa18.8■□□□□ 0.6
TRIM13-208ENST00000478111 TM6SF1Q9BZW5 370 aa18.8■□□□□ 0.6
TRIM13-208ENST00000478111 KCNH6Q9H252 994 aa18.8■□□□□ 0.6
TRIM13-208ENST00000478111 SPG21Q9NZD8 308 aa18.8■□□□□ 0.6
TRIM13-208ENST00000478111 SEPT9Q9UHD8 586 aaPredicted RBP18.8■□□□□ 0.6
TRIM13-208ENST00000478111 CYP46A1Q9Y6A2 500 aa18.8■□□□□ 0.6
TRIM13-208ENST00000478111 A0A087WZ62 844 aa18.79■□□□□ 0.6
TRIM13-208ENST00000478111 MAFO75444 373 aaPredicted RBP18.79■□□□□ 0.6
TRIM13-208ENST00000478111 PPM1AP35813 382 aa18.79■□□□□ 0.6
TRIM13-208ENST00000478111 ZXDAP98168 799 aa18.79■□□□□ 0.6
TRIM13-208ENST00000478111 TRIM67Q6ZTA4 783 aa18.79■□□□□ 0.6
TRIM13-208ENST00000478111 ANO5Q75V66 913 aa18.79■□□□□ 0.6
TRIM13-208ENST00000478111 RPGRIP1Q96KN7 1286 aa18.79■□□□□ 0.6
TRIM13-208ENST00000478111 FDXACB1Q9BRP7 624 aaPredicted RBP18.79■□□□□ 0.6
TRIM13-208ENST00000478111 TRAIPQ9BWF2 469 aa18.79■□□□□ 0.6
TRIM13-208ENST00000478111 GCOM2Q9BZD3 368 aaPredicted RBP18.79■□□□□ 0.6
TRIM13-208ENST00000478111 ENTPD7Q9NQZ7 604 aa18.79■□□□□ 0.6
TRIM13-208ENST00000478111 CHST12Q9NRB3 414 aa18.79■□□□□ 0.6
TRIM13-208ENST00000478111 EML1O00423 815 aa18.78■□□□□ 0.6
TRIM13-208ENST00000478111 CPLX1O14810 134 aa18.78■□□□□ 0.6
TRIM13-208ENST00000478111 SLC37A4O43826 429 aa18.78■□□□□ 0.6
TRIM13-208ENST00000478111 TECP42680 631 aa18.78■□□□□ 0.6
TRIM13-208ENST00000478111 PHKA2P46019 1235 aa18.78■□□□□ 0.6
TRIM13-208ENST00000478111 CDC42EP1Q00587 391 aa18.78■□□□□ 0.6
TRIM13-208ENST00000478111 NHLH1Q02575 133 aa18.78■□□□□ 0.6
TRIM13-208ENST00000478111 KRT17Q04695 432 aa18.78■□□□□ 0.6
TRIM13-208ENST00000478111 STK3Q13188 491 aa18.78■□□□□ 0.6
TRIM13-208ENST00000478111 INF2Q27J81 1249 aa18.78■□□□□ 0.6
TRIM13-208ENST00000478111 GALNT17Q6IS24 598 aa18.78■□□□□ 0.6
TRIM13-208ENST00000478111 ALYREFQ86V81 257 aaKnown RBP18.78■□□□□ 0.6
TRIM13-208ENST00000478111 FAM177A1Q8N128 213 aaPredicted RBP18.78■□□□□ 0.6
TRIM13-208ENST00000478111 MRPL43Q8N983 215 aaKnown RBP18.78■□□□□ 0.6
TRIM13-208ENST00000478111 MFSD14AQ96MC6 490 aa18.78■□□□□ 0.6
TRIM13-208ENST00000478111 SCLT1Q96NL6 688 aa18.78■□□□□ 0.6
TRIM13-208ENST00000478111 DACT1Q9NYF0 836 aa18.78■□□□□ 0.6
TRIM13-208ENST00000478111 KCNJ14Q9UNX9 436 aa18.78■□□□□ 0.6
TRIM13-208ENST00000478111 CACNA1HO95180 2353 aa18.77■□□□□ 0.6
TRIM13-208ENST00000478111 DDX11L8A8MPP1 907 aa18.77■□□□□ 0.6
TRIM13-208ENST00000478111 NT5C1B-RDH14C9J2C7 533 aa18.77■□□□□ 0.6
TRIM13-208ENST00000478111 NONOQ15233 471 aaKnown RBP eCLIP18.77■□□□□ 0.6
TRIM13-208ENST00000478111 LLGL2Q6P1M3 1020 aa18.77■□□□□ 0.6
TRIM13-208ENST00000478111 TMC7Q7Z402 723 aa18.77■□□□□ 0.6
TRIM13-208ENST00000478111 KSR1Q8IVT5 923 aa18.77■□□□□ 0.6
TRIM13-208ENST00000478111 SUCLA2Q9P2R7 463 aaPredicted RBP18.77■□□□□ 0.6
TRIM13-208ENST00000478111 DDX25Q9UHL0 483 aaKnown RBP18.77■□□□□ 0.6
TRIM13-208ENST00000478111 VAV3Q9UKW4 847 aa18.77■□□□□ 0.6
TRIM13-208ENST00000478111 KMT2EQ8IZD2 1858 aa18.77■□□□□ 0.6
TRIM13-208ENST00000478111 TMEM221A6NGB7 291 aa18.76■□□□□ 0.59
TRIM13-208ENST00000478111 C2orf71A6NGG8 1288 aa18.76■□□□□ 0.59
TRIM13-208ENST00000478111 MEIS3P2A8K0S8 358 aa18.76■□□□□ 0.59
TRIM13-208ENST00000478111 M0R296 226 aa18.76■□□□□ 0.59
TRIM13-208ENST00000478111 DNM2P50570 870 aa18.76■□□□□ 0.59
TRIM13-208ENST00000478111 BCAR1P56945 870 aa18.76■□□□□ 0.59
TRIM13-208ENST00000478111 PSMC5P62195 406 aa18.76■□□□□ 0.59
TRIM13-208ENST00000478111 ZNF410Q86VK4 478 aa18.76■□□□□ 0.59
TRIM13-208ENST00000478111 RHPN2Q8IUC4 686 aa18.76■□□□□ 0.59
TRIM13-208ENST00000478111 ZNF579Q8NAF0 562 aaKnown RBP18.76■□□□□ 0.59
TRIM13-208ENST00000478111 LPPQ93052 612 aa18.76■□□□□ 0.59
TRIM13-208ENST00000478111 PHF20Q9BVI0 1012 aa18.76■□□□□ 0.59
TRIM13-208ENST00000478111 APOL5Q9BWW9 433 aa18.76■□□□□ 0.59
TRIM13-208ENST00000478111 MRPL9Q9BYD2 267 aaKnown RBP18.76■□□□□ 0.59
TRIM13-208ENST00000478111 KCNMB3Q9NPA1 279 aa18.76■□□□□ 0.59
TRIM13-208ENST00000478111 CDH22Q9UJ99 828 aa18.76■□□□□ 0.59
TRIM13-208ENST00000478111 HCFC2Q9Y5Z7 792 aa18.76■□□□□ 0.59
TRIM13-208ENST00000478111 ARID2Q68CP9 1835 aa18.75■□□□□ 0.59
TRIM13-208ENST00000478111 ZNF623O75123 536 aa18.75■□□□□ 0.59
TRIM13-208ENST00000478111 SRGAP2BP0DMP2 458 aa18.75■□□□□ 0.59
TRIM13-208ENST00000478111 HOXB8P17481 243 aaPredicted RBP18.75■□□□□ 0.59
TRIM13-208ENST00000478111 PPP2R5CQ13362 524 aa18.75■□□□□ 0.59
TRIM13-208ENST00000478111 SMC1AQ14683 1233 aaKnown RBP18.75■□□□□ 0.59
TRIM13-208ENST00000478111 LETM2Q2VYF4 491 aa18.75■□□□□ 0.59
TRIM13-208ENST00000478111 PLA2G4FQ68DD2 849 aa18.75■□□□□ 0.59
TRIM13-208ENST00000478111 KRT25Q7Z3Z0 450 aa18.75■□□□□ 0.59
TRIM13-208ENST00000478111 TMEM173Q86WV6 379 aaPredicted RBP18.75■□□□□ 0.59
TRIM13-208ENST00000478111 IFT122Q9HBG6 1241 aa18.75■□□□□ 0.59
TRIM13-208ENST00000478111 CYP26B1Q9NR63 512 aa18.75■□□□□ 0.59
TRIM13-208ENST00000478111 GJB4Q9NTQ9 266 aa18.75■□□□□ 0.59
TRIM13-208ENST00000478111 WRAP73Q9P2S5 460 aaPredicted RBP18.75■□□□□ 0.59
TRIM13-208ENST00000478111 DTNBO60941 627 aa18.74■□□□□ 0.59
TRIM13-208ENST00000478111 CLASP2O75122 1294 aaKnown RBP18.74■□□□□ 0.59
TRIM13-208ENST00000478111 SFPQP23246 707 aaKnown RBP eCLIP18.74■□□□□ 0.59
TRIM13-208ENST00000478111 QARSP47897 775 aaKnown RBP18.74■□□□□ 0.59
TRIM13-208ENST00000478111 ALDH7A1P49419 539 aaKnown RBP18.74■□□□□ 0.59
TRIM13-208ENST00000478111 NPEPPSP55786 919 aa18.74■□□□□ 0.59
TRIM13-208ENST00000478111 SCRN1Q12765 414 aa18.74■□□□□ 0.59
TRIM13-208ENST00000478111 LONRF3Q496Y0 759 aa18.74■□□□□ 0.59
TRIM13-208ENST00000478111 TWF2Q6IBS0 349 aaKnown RBP18.74■□□□□ 0.59
TRIM13-208ENST00000478111 PPP4R3AQ6IN85 833 aa18.74■□□□□ 0.59
TRIM13-208ENST00000478111 CPLX2Q6PUV4 134 aaKnown RBP18.74■□□□□ 0.59
TRIM13-208ENST00000478111 CASP10Q92851 521 aa18.74■□□□□ 0.59
TRIM13-208ENST00000478111 PBXIP1Q96AQ6 731 aa18.74■□□□□ 0.59
TRIM13-208ENST00000478111 INO80BQ9C086 356 aaPredicted RBP18.74■□□□□ 0.59
TRIM13-208ENST00000478111 PDRG1Q9NUG6 133 aa18.74■□□□□ 0.59
TRIM13-208ENST00000478111 FAM105AQ9NUU6 356 aa18.74■□□□□ 0.59
TRIM13-208ENST00000478111 PIN4Q9Y237 131 aaKnown RBP18.74■□□□□ 0.59
TRIM13-208ENST00000478111 MYO15AQ9UKN7 3530 aa18.74■□□□□ 0.59
TRIM13-208ENST00000478111 B4GALT3O60512 393 aa18.73■□□□□ 0.59
TRIM13-208ENST00000478111 OFD1O75665 1012 aa18.73■□□□□ 0.59
TRIM13-208ENST00000478111 IER5LQ5T953 404 aa18.73■□□□□ 0.59
TRIM13-208ENST00000478111 PRSS33Q8NF86 280 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms