RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 DUSP10Q9Y6W6 482 aa6.54□□□□□ -1.36
VPS50-214ENST00000477935 COL22A1Q8NFW1 1626 aaPredicted RBP6.54□□□□□ -1.36
VPS50-214ENST00000477935 PTPDC1A2A3K4 754 aa6.53□□□□□ -1.36
VPS50-214ENST00000477935 CBX4O00257 560 aa6.53□□□□□ -1.36
VPS50-214ENST00000477935 FOXP2O15409 715 aa6.53□□□□□ -1.36
VPS50-214ENST00000477935 IGSF3O75054 1194 aa6.53□□□□□ -1.36
VPS50-214ENST00000477935 KIAA2012Q0VF49 1180 aa6.53□□□□□ -1.36
VPS50-214ENST00000477935 NFIXQ14938 502 aa6.53□□□□□ -1.36
VPS50-214ENST00000477935 FAM124AQ86V42 546 aa6.53□□□□□ -1.36
VPS50-214ENST00000477935 DHX37Q8IY37 1157 aaKnown RBP6.53□□□□□ -1.36
VPS50-214ENST00000477935 NUDT10Q8NFP7 164 aa6.53□□□□□ -1.36
VPS50-214ENST00000477935 ASB15Q8WXK1 588 aa6.53□□□□□ -1.36
VPS50-214ENST00000477935 NUDT11Q96G61 164 aa6.53□□□□□ -1.36
VPS50-214ENST00000477935 B4GALT6Q9UBX8 382 aa6.53□□□□□ -1.36
VPS50-214ENST00000477935 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.53□□□□□ -1.36
VPS50-214ENST00000477935 MPIG6BO95866 241 aa6.52□□□□□ -1.37
VPS50-214ENST00000477935 POU3F2P20265 443 aaPredicted RBP6.52□□□□□ -1.37
VPS50-214ENST00000477935 PLEKHG4Q58EX7 1191 aa6.52□□□□□ -1.37
VPS50-214ENST00000477935 CATSPEREQ5SY80 951 aa6.52□□□□□ -1.37
VPS50-214ENST00000477935 CC2D1AQ6P1N0 951 aaPredicted RBP6.52□□□□□ -1.37
VPS50-214ENST00000477935 CNNM4Q6P4Q7 775 aa6.52□□□□□ -1.37
VPS50-214ENST00000477935 DDX1Q92499 740 aaKnown RBP6.52□□□□□ -1.37
VPS50-214ENST00000477935 MBD6Q96DN6 1003 aa6.52□□□□□ -1.37
VPS50-214ENST00000477935 GBP4Q96PP9 640 aa6.52□□□□□ -1.37
VPS50-214ENST00000477935 ORAI3Q9BRQ5 295 aa6.52□□□□□ -1.37
VPS50-214ENST00000477935 SYT17Q9BSW7 474 aa6.52□□□□□ -1.37
VPS50-214ENST00000477935 UCKL1Q9NWZ5 548 aa6.52□□□□□ -1.37
VPS50-214ENST00000477935 GALNT8Q9NY28 637 aa6.52□□□□□ -1.37
VPS50-214ENST00000477935 MYOM3Q5VTT5 1437 aa6.51□□□□□ -1.37
VPS50-214ENST00000477935 H0Y858 1186 aa6.51□□□□□ -1.37
VPS50-214ENST00000477935 PRICKLE3O43900 615 aaPredicted RBP6.51□□□□□ -1.37
VPS50-214ENST00000477935 KPNA6O60684 536 aa6.51□□□□□ -1.37
VPS50-214ENST00000477935 HSPA6P17066 643 aa6.51□□□□□ -1.37
VPS50-214ENST00000477935 CNR2P34972 360 aa6.51□□□□□ -1.37
VPS50-214ENST00000477935 NEK4P51957 841 aa6.51□□□□□ -1.37
VPS50-214ENST00000477935 KIF11P52732 1056 aa6.51□□□□□ -1.37
VPS50-214ENST00000477935 NFATC3Q12968 1075 aa6.51□□□□□ -1.37
VPS50-214ENST00000477935 UBXN11Q5T124 520 aa6.51□□□□□ -1.37
VPS50-214ENST00000477935 ZFYVE27Q5T4F4 411 aa6.51□□□□□ -1.37
VPS50-214ENST00000477935 BORAQ6PGQ7 559 aa6.51□□□□□ -1.37
VPS50-214ENST00000477935 DPP8Q6V1X1 898 aaPredicted RBP6.51□□□□□ -1.37
VPS50-214ENST00000477935 FERMT3Q86UX7 667 aa6.51□□□□□ -1.37
VPS50-214ENST00000477935 KLHL36Q8N4N3 616 aa6.51□□□□□ -1.37
VPS50-214ENST00000477935 HIPK4Q8NE63 616 aa6.51□□□□□ -1.37
VPS50-214ENST00000477935 MFSD3Q96ES6 412 aa6.51□□□□□ -1.37
VPS50-214ENST00000477935 AMNQ9BXJ7 453 aa6.51□□□□□ -1.37
VPS50-214ENST00000477935 MTFR1LQ9H019 292 aa6.51□□□□□ -1.37
VPS50-214ENST00000477935 TMA7Q9Y2S6 64 aaKnown RBP6.51□□□□□ -1.37
VPS50-214ENST00000477935 ASB1Q9Y576 335 aa6.51□□□□□ -1.37
VPS50-214ENST00000477935 SPATA31A3Q5VYP0 1347 aa6.5□□□□□ -1.37
VPS50-214ENST00000477935 METP08581 1390 aa6.5□□□□□ -1.37
VPS50-214ENST00000477935 GOLGA6L22H0YM25 854 aa6.5□□□□□ -1.37
VPS50-214ENST00000477935 H7C1D1 291 aa6.5□□□□□ -1.37
VPS50-214ENST00000477935 DVL2O14641 736 aa6.5□□□□□ -1.37
VPS50-214ENST00000477935 B4GALT3O60512 393 aa6.5□□□□□ -1.37
VPS50-214ENST00000477935 IL13RA1P78552 427 aa6.5□□□□□ -1.37
VPS50-214ENST00000477935 LGI4Q8N135 537 aa6.5□□□□□ -1.37
VPS50-214ENST00000477935 TARS2Q9BW92 718 aaKnown RBP6.5□□□□□ -1.37
VPS50-214ENST00000477935 PCIF1Q9H4Z3 704 aa6.5□□□□□ -1.37
VPS50-214ENST00000477935 BARX1Q9HBU1 254 aaPredicted RBP6.5□□□□□ -1.37
VPS50-214ENST00000477935 ZDHHC9Q9Y397 364 aa6.5□□□□□ -1.37
VPS50-214ENST00000477935 BRWD3Q6RI45 1802 aa6.5□□□□□ -1.37
VPS50-214ENST00000477935 PRAMEF22A3QJZ6 481 aa6.49□□□□□ -1.37
VPS50-214ENST00000477935 FNTBP49356 437 aa6.49□□□□□ -1.37
VPS50-214ENST00000477935 PRELPP51888 382 aa6.49□□□□□ -1.37
VPS50-214ENST00000477935 STILQ15468 1287 aa6.49□□□□□ -1.37
VPS50-214ENST00000477935 ZNF174Q15697 407 aa6.49□□□□□ -1.37
VPS50-214ENST00000477935 SDE2Q6IQ49 451 aa6.49□□□□□ -1.37
VPS50-214ENST00000477935 LRSAM1Q6UWE0 723 aa6.49□□□□□ -1.37
VPS50-214ENST00000477935 Q6ZUG5 572 aa6.49□□□□□ -1.37
VPS50-214ENST00000477935 PPM1KQ8N3J5 372 aa6.49□□□□□ -1.37
VPS50-214ENST00000477935 KIAA1958Q8N8K9 716 aa6.49□□□□□ -1.37
VPS50-214ENST00000477935 ERCC4Q92889 916 aaPredicted RBP6.49□□□□□ -1.37
VPS50-214ENST00000477935 RELTQ969Z4 430 aa6.49□□□□□ -1.37
VPS50-214ENST00000477935 BTBD2Q9BX70 525 aa6.49□□□□□ -1.37
VPS50-214ENST00000477935 ACSS2Q9NR19 701 aa6.49□□□□□ -1.37
VPS50-214ENST00000477935 ADAM29Q9UKF5 820 aa6.49□□□□□ -1.37
VPS50-214ENST00000477935 INVSQ9Y283 1065 aa6.49□□□□□ -1.37
VPS50-214ENST00000477935 ADGRL2O95490 1459 aa6.48□□□□□ -1.37
VPS50-214ENST00000477935 RGPD1P0DJD0 1748 aa6.48□□□□□ -1.37
VPS50-214ENST00000477935 TMEM131LA2VDJ0 1609 aa6.48□□□□□ -1.37
VPS50-214ENST00000477935 FOXD2O60548 495 aaPredicted RBP6.48□□□□□ -1.37
VPS50-214ENST00000477935 F2P00734 622 aa6.48□□□□□ -1.37
VPS50-214ENST00000477935 ATP2A2P16615 1042 aaKnown RBP6.48□□□□□ -1.37
VPS50-214ENST00000477935 ECE1P42892 770 aa6.48□□□□□ -1.37
VPS50-214ENST00000477935 PCBP1Q15365 356 aaKnown RBP eCLIP6.48□□□□□ -1.37
VPS50-214ENST00000477935 WDR72Q3MJ13 1102 aa6.48□□□□□ -1.37
VPS50-214ENST00000477935 KANK2Q63ZY3 851 aa6.48□□□□□ -1.37
VPS50-214ENST00000477935 CREB3L3Q68CJ9 461 aa6.48□□□□□ -1.37
VPS50-214ENST00000477935 RTN4RL1Q86UN2 441 aaPredicted RBP6.48□□□□□ -1.37
VPS50-214ENST00000477935 KIF18BQ86Y91 864 aa6.48□□□□□ -1.37
VPS50-214ENST00000477935 KBTBD2Q8IY47 623 aa6.48□□□□□ -1.37
VPS50-214ENST00000477935 CXorf38Q8TB03 319 aa6.48□□□□□ -1.37
VPS50-214ENST00000477935 AJUBAQ96IF1 538 aa6.48□□□□□ -1.37
VPS50-214ENST00000477935 KATNBL1Q9H079 304 aa6.48□□□□□ -1.37
VPS50-214ENST00000477935 OR10A5Q9H207 317 aa6.48□□□□□ -1.37
VPS50-214ENST00000477935 ZKSCAN5Q9Y2L8 839 aa6.48□□□□□ -1.37
VPS50-214ENST00000477935 PXDNQ92626 1479 aa6.47□□□□□ -1.37
VPS50-214ENST00000477935 ANKRD30AQ9BXX3 1397 aa6.47□□□□□ -1.37
VPS50-214ENST00000477935 ZNF891A8MT65 544 aaPredicted RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms