RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 HMGCRP04035 888 aa5.65□□□□□ -1.5
CKS1B-207ENST00000477676 CYP2B6P20813 491 aa5.65□□□□□ -1.5
CKS1B-207ENST00000477676 CCND3P30281 292 aaPredicted RBP5.65□□□□□ -1.5
CKS1B-207ENST00000477676 IL15P40933 162 aaPredicted RBP5.65□□□□□ -1.5
CKS1B-207ENST00000477676 CACNB2Q08289 660 aaPredicted RBP5.65□□□□□ -1.5
CKS1B-207ENST00000477676 TFCP2Q12800 502 aa5.65□□□□□ -1.5
CKS1B-207ENST00000477676 SEPT6Q14141 434 aa5.65□□□□□ -1.5
CKS1B-207ENST00000477676 PUM1Q14671 1186 aaKnown RBP eCLIP5.65□□□□□ -1.5
CKS1B-207ENST00000477676 SNX17Q15036 470 aa5.65□□□□□ -1.5
CKS1B-207ENST00000477676 LRRC26Q2I0M4 334 aa5.65□□□□□ -1.5
CKS1B-207ENST00000477676 CLEC16AQ2KHT3 1053 aa5.65□□□□□ -1.5
CKS1B-207ENST00000477676 LRIT3Q3SXY7 679 aa5.65□□□□□ -1.5
CKS1B-207ENST00000477676 ADGRA1Q86SQ6 560 aa5.65□□□□□ -1.5
CKS1B-207ENST00000477676 DZIP1Q86YF9 867 aaKnown RBP5.65□□□□□ -1.5
CKS1B-207ENST00000477676 SYT8Q8NBV8 401 aa5.65□□□□□ -1.5
CKS1B-207ENST00000477676 COA7Q96BR5 231 aa5.65□□□□□ -1.5
CKS1B-207ENST00000477676 Q96M66 194 aa5.65□□□□□ -1.5
CKS1B-207ENST00000477676 GUCD1Q96NT3 240 aa5.65□□□□□ -1.5
CKS1B-207ENST00000477676 P2RX7Q99572 595 aaKnown RBP5.65□□□□□ -1.5
CKS1B-207ENST00000477676 NOC4LQ9BVI4 516 aaKnown RBP5.65□□□□□ -1.5
CKS1B-207ENST00000477676 GPR62Q9BZJ7 368 aa5.65□□□□□ -1.5
CKS1B-207ENST00000477676 OSBPL5Q9H0X9 879 aaPredicted RBP5.65□□□□□ -1.5
CKS1B-207ENST00000477676 PORCNQ9H237 461 aa5.65□□□□□ -1.5
CKS1B-207ENST00000477676 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.65□□□□□ -1.5
CKS1B-207ENST00000477676 RBPJLQ9UBG7 517 aa5.65□□□□□ -1.5
CKS1B-207ENST00000477676 MORF4L1Q9UBU8 362 aa5.65□□□□□ -1.5
CKS1B-207ENST00000477676 TJP2Q9UDY2 1190 aa5.65□□□□□ -1.5
CKS1B-207ENST00000477676 GPR160Q9UJ42 338 aa5.65□□□□□ -1.5
CKS1B-207ENST00000477676 RPTORQ8N122 1335 aa5.65□□□□□ -1.51
CKS1B-207ENST00000477676 TRIOO75962 3097 aa5.65□□□□□ -1.51
CKS1B-207ENST00000477676 A0A0G2JMZ2 1700 aa5.65□□□□□ -1.51
CKS1B-207ENST00000477676 NAV1Q8NEY1 1877 aa5.64□□□□□ -1.51
CKS1B-207ENST00000477676 CNMDO75829 334 aa5.64□□□□□ -1.51
CKS1B-207ENST00000477676 UBTFL1P0CB47 393 aaPredicted RBP5.64□□□□□ -1.51
CKS1B-207ENST00000477676 PLCG1P19174 1290 aa5.64□□□□□ -1.51
CKS1B-207ENST00000477676 HOXA7P31268 230 aaPredicted RBP5.64□□□□□ -1.51
CKS1B-207ENST00000477676 MCAMP43121 646 aa5.64□□□□□ -1.51
CKS1B-207ENST00000477676 GCLCP48506 637 aaPredicted RBP5.64□□□□□ -1.51
CKS1B-207ENST00000477676 GALK1P51570 392 aa5.64□□□□□ -1.51
CKS1B-207ENST00000477676 ALDH1L2Q3SY69 923 aa5.64□□□□□ -1.51
CKS1B-207ENST00000477676 METTL16Q86W50 562 aaKnown RBP5.64□□□□□ -1.51
CKS1B-207ENST00000477676 TDHQ8IZJ6 230 aa5.64□□□□□ -1.51
CKS1B-207ENST00000477676 FAM13CQ8NE31 585 aa5.64□□□□□ -1.51
CKS1B-207ENST00000477676 SH3RF3Q8TEJ3 882 aaPredicted RBP5.64□□□□□ -1.51
CKS1B-207ENST00000477676 CYB5D2Q8WUJ1 264 aa5.64□□□□□ -1.51
CKS1B-207ENST00000477676 ADAM7Q9H2U9 754 aa5.64□□□□□ -1.51
CKS1B-207ENST00000477676 C11orf49Q9H6J7 331 aa5.64□□□□□ -1.51
CKS1B-207ENST00000477676 EPB41L4AQ9HCS5 686 aaPredicted RBP5.64□□□□□ -1.51
CKS1B-207ENST00000477676 GNL3LQ9NVN8 582 aaKnown RBP5.64□□□□□ -1.51
CKS1B-207ENST00000477676 FLRT1Q9NZU1 646 aa5.64□□□□□ -1.51
CKS1B-207ENST00000477676 MBD1Q9UIS9 605 aaPredicted RBP5.64□□□□□ -1.51
CKS1B-207ENST00000477676 NOB1Q9ULX3 412 aaKnown RBP5.64□□□□□ -1.51
CKS1B-207ENST00000477676 STXBP5LQ9Y2K9 1186 aa5.64□□□□□ -1.51
CKS1B-207ENST00000477676 PCDHB5Q9Y5E4 795 aa5.64□□□□□ -1.51
CKS1B-207ENST00000477676 MYH7P12883 1935 aa5.64□□□□□ -1.51
CKS1B-207ENST00000477676 BRWD1Q9NSI6 2320 aa5.63□□□□□ -1.51
CKS1B-207ENST00000477676 ZNF236Q9UL36 1845 aa5.63□□□□□ -1.51
CKS1B-207ENST00000477676 WDFY4Q6ZS81 3184 aa5.63□□□□□ -1.51
CKS1B-207ENST00000477676 PNMA6EA0A0J9YXQ4 647 aa5.63□□□□□ -1.51
CKS1B-207ENST00000477676 E9PSI1 815 aa5.63□□□□□ -1.51
CKS1B-207ENST00000477676 CAPN2P17655 700 aa5.63□□□□□ -1.51
CKS1B-207ENST00000477676 CDK8P49336 464 aa5.63□□□□□ -1.51
CKS1B-207ENST00000477676 BACE1P56817 501 aa5.63□□□□□ -1.51
CKS1B-207ENST00000477676 HERVK_113P62684 666 aa5.63□□□□□ -1.51
CKS1B-207ENST00000477676 SRSF3P84103 164 aaKnown RBP5.63□□□□□ -1.51
CKS1B-207ENST00000477676 PLP2Q04941 152 aa5.63□□□□□ -1.51
CKS1B-207ENST00000477676 MTX1Q13505 466 aa5.63□□□□□ -1.51
CKS1B-207ENST00000477676 PWP1Q13610 501 aa5.63□□□□□ -1.51
CKS1B-207ENST00000477676 TSPYL5Q86VY4 417 aaPredicted RBP5.63□□□□□ -1.51
CKS1B-207ENST00000477676 TEX11Q8IYF3 940 aa5.63□□□□□ -1.51
CKS1B-207ENST00000477676 ZGPATQ8N5A5 531 aaKnown RBP5.63□□□□□ -1.51
CKS1B-207ENST00000477676 SPATA5Q8NB90 893 aa5.63□□□□□ -1.51
CKS1B-207ENST00000477676 TRPV1Q8NER1 839 aa5.63□□□□□ -1.51
CKS1B-207ENST00000477676 SMC4Q9NTJ3 1288 aa5.63□□□□□ -1.51
CKS1B-207ENST00000477676 EBF1Q9UH73 591 aa5.63□□□□□ -1.51
CKS1B-207ENST00000477676 TCF20Q9UGU0 1960 aaKnown RBP5.63□□□□□ -1.51
CKS1B-207ENST00000477676 OR14I1A6ND48 311 aa5.62□□□□□ -1.51
CKS1B-207ENST00000477676 SRGAP3O43295 1099 aa5.62□□□□□ -1.51
CKS1B-207ENST00000477676 ANP32CO43423 234 aa5.62□□□□□ -1.51
CKS1B-207ENST00000477676 ST13P50502 369 aaKnown RBP5.62□□□□□ -1.51
CKS1B-207ENST00000477676 EPHB3P54753 998 aa5.62□□□□□ -1.51
CKS1B-207ENST00000477676 DYNLL1P63167 89 aaKnown RBP5.62□□□□□ -1.51
CKS1B-207ENST00000477676 PSMD2Q13200 908 aa5.62□□□□□ -1.51
CKS1B-207ENST00000477676 SPTY2D1Q68D10 685 aaPredicted RBP5.62□□□□□ -1.51
CKS1B-207ENST00000477676 GPR142Q7Z601 462 aa5.62□□□□□ -1.51
CKS1B-207ENST00000477676 MAPKAPK5Q8IW41 473 aa5.62□□□□□ -1.51
CKS1B-207ENST00000477676 ANKS4BQ8N8V4 417 aa5.62□□□□□ -1.51
CKS1B-207ENST00000477676 PPP1R13LQ8WUF5 828 aa5.62□□□□□ -1.51
CKS1B-207ENST00000477676 RNF141Q8WVD5 230 aa5.62□□□□□ -1.51
CKS1B-207ENST00000477676 ASPNQ9BXN1 380 aa5.62□□□□□ -1.51
CKS1B-207ENST00000477676 BCL11AQ9H165 835 aa5.62□□□□□ -1.51
CKS1B-207ENST00000477676 AATFQ9NY61 560 aaKnown RBP eCLIP5.62□□□□□ -1.51
CKS1B-207ENST00000477676 PALD1Q9ULE6 856 aa5.62□□□□□ -1.51
CKS1B-207ENST00000477676 ZBTB21Q9ULJ3 1066 aa5.62□□□□□ -1.51
CKS1B-207ENST00000477676 PCDHA11Q9Y5I1 949 aa5.62□□□□□ -1.51
CKS1B-207ENST00000477676 FLT1P17948 1338 aa5.62□□□□□ -1.51
CKS1B-207ENST00000477676 C5orf42Q9H799 3197 aa5.62□□□□□ -1.51
CKS1B-207ENST00000477676 SSU72P8A0A1W2PR75 194 aa5.61□□□□□ -1.51
CKS1B-207ENST00000477676 ZC3H12DA2A288 527 aaKnown RBP5.61□□□□□ -1.51
CKS1B-207ENST00000477676 SUV39H1O43463 412 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms