RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 RSAD2Q8WXG1 361 aa11.11□□□□□ -0.63
COL4A5-204ENST00000477429 LPPQ93052 612 aa11.11□□□□□ -0.63
COL4A5-204ENST00000477429 LZTS2Q9BRK4 669 aa11.11□□□□□ -0.63
COL4A5-204ENST00000477429 ZBP1Q9H171 429 aa11.11□□□□□ -0.63
COL4A5-204ENST00000477429 RIC8AQ9NPQ8 531 aa11.11□□□□□ -0.63
COL4A5-204ENST00000477429 NR2E1Q9Y466 385 aa11.11□□□□□ -0.63
COL4A5-204ENST00000477429 MAFBQ9Y5Q3 323 aaPredicted RBP11.11□□□□□ -0.63
COL4A5-204ENST00000477429 SREBF1P36956 1147 aa11.1□□□□□ -0.63
COL4A5-204ENST00000477429 CLCN5P51795 746 aa11.1□□□□□ -0.63
COL4A5-204ENST00000477429 AFF1P51825 1210 aaKnown RBP11.1□□□□□ -0.63
COL4A5-204ENST00000477429 BCAR1P56945 870 aa11.1□□□□□ -0.63
COL4A5-204ENST00000477429 ITIH3Q06033 890 aa11.1□□□□□ -0.63
COL4A5-204ENST00000477429 SMC1AQ14683 1233 aaKnown RBP11.1□□□□□ -0.63
COL4A5-204ENST00000477429 ANGPT1Q15389 498 aa11.1□□□□□ -0.63
COL4A5-204ENST00000477429 KIAA1841Q6NSI8 718 aa11.1□□□□□ -0.63
COL4A5-204ENST00000477429 NFXL1Q6ZNB6 911 aa11.1□□□□□ -0.63
COL4A5-204ENST00000477429 CCDC105Q8IYK2 499 aa11.1□□□□□ -0.63
COL4A5-204ENST00000477429 LRRC43Q8N309 656 aa11.1□□□□□ -0.63
COL4A5-204ENST00000477429 METTL13Q8N6R0 699 aa11.1□□□□□ -0.63
COL4A5-204ENST00000477429 TDRD5Q8NAT2 981 aaKnown RBP11.1□□□□□ -0.63
COL4A5-204ENST00000477429 FANCBQ8NB91 859 aa11.1□□□□□ -0.63
COL4A5-204ENST00000477429 TCEANC2Q96MN5 208 aa11.1□□□□□ -0.63
COL4A5-204ENST00000477429 FAM217BQ9NTX9 383 aaPredicted RBP11.1□□□□□ -0.63
COL4A5-204ENST00000477429 PUF60Q9UHX1 559 aaKnown RBP11.1□□□□□ -0.63
COL4A5-204ENST00000477429 BRPF3Q9ULD4 1205 aa11.1□□□□□ -0.63
COL4A5-204ENST00000477429 COL1A2P08123 1366 aa11.1□□□□□ -0.63
COL4A5-204ENST00000477429 COL4A3Q01955 1670 aa11.1□□□□□ -0.63
COL4A5-204ENST00000477429 DENND4AQ7Z401 1863 aa11.1□□□□□ -0.63
COL4A5-204ENST00000477429 SMG1Q96Q15 3661 aaKnown RBP11.09□□□□□ -0.63
COL4A5-204ENST00000477429 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.09□□□□□ -0.63
COL4A5-204ENST00000477429 KRBA1A5PL33 1030 aa11.09□□□□□ -0.63
COL4A5-204ENST00000477429 TMEM150BA6NC51 233 aa11.09□□□□□ -0.63
COL4A5-204ENST00000477429 SLC27A2O14975 620 aa11.09□□□□□ -0.63
COL4A5-204ENST00000477429 EOMESO95936 686 aa11.09□□□□□ -0.63
COL4A5-204ENST00000477429 SRGAP2BP0DMP2 458 aa11.09□□□□□ -0.63
COL4A5-204ENST00000477429 MYBP10242 640 aa11.09□□□□□ -0.63
COL4A5-204ENST00000477429 AOC1P19801 751 aa11.09□□□□□ -0.63
COL4A5-204ENST00000477429 CA8P35219 290 aa11.09□□□□□ -0.63
COL4A5-204ENST00000477429 MTHFRP42898 656 aa11.09□□□□□ -0.63
COL4A5-204ENST00000477429 GNAQP50148 359 aa11.09□□□□□ -0.63
COL4A5-204ENST00000477429 SLC26A2P50443 739 aa11.09□□□□□ -0.63
COL4A5-204ENST00000477429 JAKMIP3Q5VZ66 844 aa11.09□□□□□ -0.63
COL4A5-204ENST00000477429 CES5AQ6NT32 575 aa11.09□□□□□ -0.63
COL4A5-204ENST00000477429 MICU3Q86XE3 530 aa11.09□□□□□ -0.63
COL4A5-204ENST00000477429 PLA2G4DQ86XP0 818 aa11.09□□□□□ -0.63
COL4A5-204ENST00000477429 VPS52Q8N1B4 723 aa11.09□□□□□ -0.63
COL4A5-204ENST00000477429 GJA10Q969M2 543 aa11.09□□□□□ -0.63
COL4A5-204ENST00000477429 LSG1Q9H089 658 aaKnown RBP11.09□□□□□ -0.63
COL4A5-204ENST00000477429 DNAJB4Q9UDY4 337 aa11.09□□□□□ -0.63
COL4A5-204ENST00000477429 R4GN57 208 aa11.09□□□□□ -0.63
COL4A5-204ENST00000477429 A0A0U1RQF3 1178 aa11.08□□□□□ -0.64
COL4A5-204ENST00000477429 FSD2A1L4K1 749 aa11.08□□□□□ -0.64
COL4A5-204ENST00000477429 SMCO2A6NFE2 343 aa11.08□□□□□ -0.64
COL4A5-204ENST00000477429 CCDC69A6NI79 296 aa11.08□□□□□ -0.64
COL4A5-204ENST00000477429 DARSP14868 501 aaKnown RBP11.08□□□□□ -0.64
COL4A5-204ENST00000477429 EIF4BP23588 611 aaKnown RBP11.08□□□□□ -0.64
COL4A5-204ENST00000477429 CDC27P30260 824 aa11.08□□□□□ -0.64
COL4A5-204ENST00000477429 PPM1AP35813 382 aa11.08□□□□□ -0.64
COL4A5-204ENST00000477429 GPC3P51654 580 aa11.08□□□□□ -0.64
COL4A5-204ENST00000477429 NAPAP54920 295 aa11.08□□□□□ -0.64
COL4A5-204ENST00000477429 KRT17Q04695 432 aa11.08□□□□□ -0.64
COL4A5-204ENST00000477429 FAM160B1Q5W0V3 765 aa11.08□□□□□ -0.64
COL4A5-204ENST00000477429 MCTP2Q6DN12 878 aa11.08□□□□□ -0.64
COL4A5-204ENST00000477429 EFCAB12Q6NXP0 572 aa11.08□□□□□ -0.64
COL4A5-204ENST00000477429 CASC1Q6TDU7 716 aa11.08□□□□□ -0.64
COL4A5-204ENST00000477429 ZNF280BQ86YH2 543 aa11.08□□□□□ -0.64
COL4A5-204ENST00000477429 SIX5Q8N196 739 aa11.08□□□□□ -0.64
COL4A5-204ENST00000477429 DTWD2Q8NBA8 298 aa11.08□□□□□ -0.64
COL4A5-204ENST00000477429 LENG9Q96B70 501 aa11.08□□□□□ -0.64
COL4A5-204ENST00000477429 NECTIN4Q96NY8 510 aa11.08□□□□□ -0.64
COL4A5-204ENST00000477429 SH2D3AQ9BRG2 576 aa11.08□□□□□ -0.64
COL4A5-204ENST00000477429 MFSD1Q9H3U5 465 aa11.08□□□□□ -0.64
COL4A5-204ENST00000477429 NRDE2Q9H7Z3 1164 aa11.08□□□□□ -0.64
COL4A5-204ENST00000477429 KCNK12Q9HB15 430 aa11.08□□□□□ -0.64
COL4A5-204ENST00000477429 GABBR1Q9UBS5 961 aa11.08□□□□□ -0.64
COL4A5-204ENST00000477429 DBR1Q9UK59 544 aaKnown RBP11.08□□□□□ -0.64
COL4A5-204ENST00000477429 AKT3Q9Y243 479 aa11.08□□□□□ -0.64
COL4A5-204ENST00000477429 V9GY48 417 aaPredicted RBP11.08□□□□□ -0.64
COL4A5-204ENST00000477429 TULP1O00294 542 aaPredicted RBP11.07□□□□□ -0.64
COL4A5-204ENST00000477429 IPO5O00410 1097 aaKnown RBP11.07□□□□□ -0.64
COL4A5-204ENST00000477429 ZC3H11AO75152 810 aaKnown RBP eCLIP11.07□□□□□ -0.64
COL4A5-204ENST00000477429 STBD1O95210 358 aa11.07□□□□□ -0.64
COL4A5-204ENST00000477429 ADRB1P08588 477 aa11.07□□□□□ -0.64
COL4A5-204ENST00000477429 CTSAP10619 480 aa11.07□□□□□ -0.64
COL4A5-204ENST00000477429 MCM5P33992 734 aa11.07□□□□□ -0.64
COL4A5-204ENST00000477429 LIFRP42702 1097 aa11.07□□□□□ -0.64
COL4A5-204ENST00000477429 SLC11A1P49279 550 aa11.07□□□□□ -0.64
COL4A5-204ENST00000477429 ADCY7P51828 1080 aa11.07□□□□□ -0.64
COL4A5-204ENST00000477429 PTPN14Q15678 1187 aa11.07□□□□□ -0.64
COL4A5-204ENST00000477429 ATAT1Q5SQI0 421 aa11.07□□□□□ -0.64
COL4A5-204ENST00000477429 MIS18BP1Q6P0N0 1132 aa11.07□□□□□ -0.64
COL4A5-204ENST00000477429 NIPA1Q7RTP0 329 aa11.07□□□□□ -0.64
COL4A5-204ENST00000477429 TAS1R1Q7RTX1 841 aa11.07□□□□□ -0.64
COL4A5-204ENST00000477429 GPR149Q86SP6 731 aa11.07□□□□□ -0.64
COL4A5-204ENST00000477429 CKAP2LQ8IYA6 745 aa11.07□□□□□ -0.64
COL4A5-204ENST00000477429 DCLK2Q8N568 766 aa11.07□□□□□ -0.64
COL4A5-204ENST00000477429 RIN2Q8WYP3 895 aaPredicted RBP11.07□□□□□ -0.64
COL4A5-204ENST00000477429 TNPO1Q92973 898 aaKnown RBP11.07□□□□□ -0.64
COL4A5-204ENST00000477429 IGSF21Q96ID5 467 aa11.07□□□□□ -0.64
COL4A5-204ENST00000477429 CEP89Q96ST8 783 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms