RNA–Protein interactions for RNA: ENST00000477289.1

NSMCE4A-208, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, human

TSL 2

Gene NSMCE4A, Length 643 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NSMCE4A-208	ENST00000477289	ITGA4	P13612	1032 aa		5.44	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	COL11A2	P13942	1736 aa	Predicted RBP	5.44	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	ATF2	P15336	505 aa		5.44	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	TACR1	P25103	407 aa		5.44	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	RPS12	P25398	132 aa	Known RBP	5.44	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	CORO7	P57737	925 aa		5.44	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	CAP1	Q01518	475 aa		5.44	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	HDAC1	Q13547	482 aa	Predicted RBP	5.44	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	CACNA1S	Q13698	1873 aa		5.44	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	TNNI3K	Q59H18	835 aa		5.44	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	ANKRD45	Q5TZF3	282 aa		5.44	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	BICRAL	Q6AI39	1079 aa		5.44	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	TTLL5	Q6EMB2	1281 aa		5.44	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	OLFM4	Q6UX06	510 aa		5.44	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	C15orf52	Q6ZUT6	534 aa	Known RBP	5.44	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	GPC2	Q8N158	579 aa		5.44	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	WDR66	Q8TBY9	1149 aa		5.44	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	RNF34	Q969K3	372 aa		5.44	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	ZDHHC15	Q96MV8	337 aa		5.44	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	NOL10	Q9BSC4	688 aa	Known RBP	5.44	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	DCTPP1	Q9H773	170 aa		5.44	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	DBNDD1	Q9H9R9	158 aa		5.44	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	CD209	Q9NNX6	404 aa		5.44	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	SF3B6	Q9Y3B4	125 aa	Known RBP	5.44	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	FPGT-TNNI3K	V9GXZ4	949 aa		5.44	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	MAST3	O60307	1309 aa		5.44	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	GLTPD2	A6NH11	291 aa		5.43	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	MYO1B	O43795	1136 aa		5.43	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	IGSF3	O75054	1194 aa		5.43	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	RAD17	O75943	681 aa		5.43	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	PLA2G1B	P04054	148 aa	Known RBP	5.43	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	PFKL	P17858	780 aa		5.43	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	GYG1	P46976	350 aa		5.43	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	RBM5	P52756	815 aa	Known RBP eCLIP	5.43	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	TIMM10	P62072	90 aa		5.43	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	PRR5	P85299	388 aa		5.43	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	POU4F1	Q01851	419 aa		5.43	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	CHAF1A	Q13111	956 aa	Predicted RBP	5.43	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	PPP2R5D	Q14738	602 aa		5.43	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	TTF1	Q15361	905 aa	Predicted RBP	5.43	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	VWA3B	Q502W6	1294 aa		5.43	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	STRIP1	Q5VSL9	837 aa		5.43	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	ATG9A	Q7Z3C6	839 aa		5.43	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	HAUS7	Q99871	368 aa		5.43	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	KLHL25	Q9H0H3	589 aa		5.43	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	CCDC8	Q9H0W5	538 aa	Predicted RBP	5.43	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	IL1RAPL2	Q9NP60	686 aa		5.43	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	FBLN5	Q9UBX5	448 aa		5.43	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	DIS3	Q9Y2L1	958 aa	Known RBP	5.43	□□□□□ -1.54
NSMCE4A-208	ENST00000477289		F8W031	263 aa	Predicted RBP	5.42	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	FZD9	O00144	591 aa		5.42	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	AURKA	O14965	403 aa		5.42	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	TBC1D8	O95759	1140 aa		5.42	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	RECK	O95980	971 aa		5.42	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	LDHC	P07864	332 aa		5.42	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	GLI4	P10075	376 aa		5.42	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	IL1R1	P14778	569 aa		5.42	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	VEGFA	P15692	232 aa	Predicted RBP	5.42	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	L1CAM	P32004	1257 aa		5.42	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	SOX9	P48436	509 aa		5.42	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	FKBP1A	P62942	108 aa	Known RBP	5.42	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	GSTO1	P78417	241 aa		5.42	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	PAK2	Q13177	524 aa		5.42	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	TCEAL1	Q15170	157 aa		5.42	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	TARBP2	Q15633	366 aa	Known RBP	5.42	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	RCSD1	Q6JBY9	416 aa		5.42	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	ZSCAN25	Q6NSZ9	544 aa		5.42	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	CENPQ	Q7L2Z9	268 aa	Predicted RBP	5.42	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	PNMA8A	Q86V59	439 aa	Predicted RBP	5.42	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	METTL16	Q86W50	562 aa	Known RBP	5.42	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	DZIP1	Q86YF9	867 aa	Known RBP	5.42	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	AGBL3	Q8NEM8	1001 aa		5.42	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	ADCY4	Q8NFM4	1077 aa		5.42	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	FNIP1	Q8TF40	1166 aa		5.42	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	ZNF526	Q8TF50	670 aa	Predicted RBP	5.42	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	DPF2	Q92785	391 aa		5.42	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	FAM84B	Q96KN1	310 aa	Predicted RBP	5.42	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	5.42	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	TMOD2	Q9NZR1	351 aa		5.42	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	WHRN	Q9P202	907 aa		5.42	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	LRP2BP	Q9P2M1	347 aa		5.42	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	ABCF2	Q9UG63	623 aa		5.42	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	HACL1	Q9UJ83	578 aa		5.42	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	CNOT11	Q9UKZ1	510 aa	Known RBP	5.42	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	PALD1	Q9ULE6	856 aa		5.42	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	PCDHB10	Q9UN67	800 aa		5.42	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	SUGT1	Q9Y2Z0	365 aa		5.42	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	KIAA1551	Q9HCM1	1747 aa		5.42	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	BRCA1	P38398	1863 aa	Known RBP	5.41	□□□□□ -1.54
NSMCE4A-208	ENST00000477289		A0A1W2PQH9	124 aa		5.41	□□□□□ -1.54
NSMCE4A-208	ENST00000477289		A0A1W2PQJ5	194 aa		5.41	□□□□□ -1.54
NSMCE4A-208	ENST00000477289		K7ESM1	405 aa		5.41	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	PSMD14	O00487	310 aa		5.41	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	PPP1R11	O60927	126 aa	Predicted RBP	5.41	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	DDN	O94850	711 aa	Predicted RBP	5.41	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	FGFR2	P21802	821 aa		5.41	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	MC3R	P41968	323 aa		5.41	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	GIPR	P48546	466 aa		5.41	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	KCNC1	P48547	511 aa		5.41	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	SLURP1	P55000	103 aa		5.41	□□□□□ -1.54

Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms